Page last updated: 2024-11-04

propidium

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Description

Propidium is a fluorescent dye that binds to DNA. It is commonly used in flow cytometry and microscopy to detect and quantify cells based on their DNA content. Propidium iodide is a cell-impermeable dye that can only enter cells with compromised membranes. It is not used for live cell imaging, as it can be toxic to cells. Propidium iodide intercalates into DNA by binding to the minor groove, which causes a conformational change in the DNA molecule and an increase in its fluorescence. This fluorescence can then be detected using a microscope or flow cytometer. Propidium iodide is a valuable tool for studying cell cycle analysis, apoptosis, and other cellular processes.'

Propidium: Quaternary ammonium analog of ethidium; an intercalating dye with a specific affinity to certain forms of DNA and, used as diiodide, to separate them in density gradients; also forms fluorescent complexes with cholinesterase which it inhibits. [Medical Subject Headings (MeSH), National Library of Medicine, extracted Dec-2023]

Cross-References

ID SourceID
PubMed CID4939
CHEMBL ID332935
CHEBI ID51246
SCHEMBL ID55279
MeSH IDM0017755

Synonyms (52)

Synonym
CBIOL_001968
CHEBI:51246 ,
3,8-diamino-5-{3-[diethyl(methyl)ammonio]propyl}-6-phenylphenanthridinium
3,8-diamino-5-(3-(diethylmethylammonio)propyl)-6-phenylphenanthridinium
CHEMBL332935 ,
IDI1_002114
BSPBIO_001038
BIO1_001232
BIO2_000359
BIO1_000254
cas-25535-16-4
NCGC00016793-01
BIO1_000743
BIO2_000839
BPBIO1_001018
BSPBIO_000924
PRESTWICK3_000792
3,8-diamino-5[3-(diethylmethylammonio)propyl]-6-phenylphenanthridinium
propidium
DB02166
NCGC00163475-01
KBIO2_005514
KBIO3_000736
KBIO3_000735
KBIO2_002946
KBIO2_000378
KBIOSS_000378
KBIOGR_000378
PRESTWICK0_000792
SPBIO_002863
PRESTWICK1_000792
PRESTWICK2_000792
36015-30-2
phenanthridinium, 3,8-diamino-5-(3-(diethylmethylammonio)propyl)-6-phenyl-
propidium iodide, 2
bdbm31904
HMS1990D19
HMS1362D19
HMS1792D19
3-(3,8-diamino-6-phenylphenanthridin-5-ium-5-yl)propyl-diethyl-methylazanium
NCGC00016793-02
unii-74nx23j96y
74nx23j96y ,
SCHEMBL55279
propidium ion
propidium cation
J-100236
DTXSID20189583
Q27093226
propidium-iodide
3,8-diamino-5-(3-(diethyl(methyl)ammonio)propyl)-6-phenylphenanthridin-5-ium
bdbm50599195

Research Excerpts

Overview

Propidium monoazide is a DNA-intercalating dye. Propidium iodide (PI) is a commonly used viability stain in these studies.

ExcerptReferenceRelevance
"Propidium monoazide is a DNA-intercalating dye. "( Molecular monitoring of Escherichia coli O157: H7 sterilization rate using qPCR and propidium monoazide treatment.
Cong-Cong, L; Hui, W; Xing-Long, X; Yang, Q; Yi-Gang, Y, 2013
)
2.06
"Propidium iodide (PI) is a small fluorescent molecule that binds to DNA but cannot passively traverse into cells that possess an intact plasma membrane. "( Measuring Cell Death by Propidium Iodide Uptake and Flow Cytometry.
Boughaba, JA; Chojnowski, G; Crowley, LC; Marfell, BJ; Scott, AP; Waterhouse, NJ, 2016
)
2.18
"Propidium iodide (PI) is a commonly used viability stain in these studies."( Conventional apoptosis assays using propidium iodide generate a significant number of false positives that prevent accurate assessment of cell death.
Barreda, DR; Hall, BE; Luong, le T; Rieger, AM; Schang, LM, 2010
)
1.36
"Propidium monoazide is a membrane-impermeant dye that selectively penetrates cells with compromised membranes, which can be considered dead."( Use of propidium monoazide for live/dead distinction in microbial ecology.
Burr, MD; Camper, AK; Nocker, A; Sossa-Fernandez, P, 2007
)
1.52

Effects

Propidium iodide has its maximum excitation at about 530 nm and maximum fluorescence at 615 nm. It can be used as a fluorescent marker with confocal microscopes that do not have a UV excitation source. Propidium is a selective ligand for the peripheral anionic site on acetylcholinesterase.

ExcerptReferenceRelevance
"Propidium iodide has its maximum excitation at about 530 nm and maximum fluorescence at 615 nm, and therefore it can be used as a fluorescent marker with confocal microscopes that do not have a UV excitation source."( A method to stain nuclei of Drosophila for confocal microscopy.
Orsulic, S; Peifer, M, 1994
)
1.01
"Propidium has been demonstrated in previous studies to be a selective ligand for the peripheral anionic site on acetylcholinesterase (EC 3.1.1.7). "( Role of the peripheral anionic site on acetylcholinesterase: inhibition by substrates and coumarin derivatives.
Radić, Z; Reiner, E; Taylor, P, 1991
)
1.72

Toxicity

Propidium iodide intercalation method was used to examine toxic effects. Significant toxicity was seen 3 days after exposure and increased with time. After ATP depletion of hepatocytes and neonatal cardiac myocytes with metabolic inhibitors ("chemical hypoxia"), and exposure of Madine Darby canine kidney cells to the toxic chemical, HgCl2, propidium iodides fluorescence progressively increased.

ExcerptReferenceRelevance
" After ATP depletion of hepatocytes and neonatal cardiac myocytes with metabolic inhibitors ("chemical hypoxia"), and exposure of Madine Darby canine kidney cells to the toxic chemical, HgCl2, propidium iodide fluorescence progressively increased."( A novel cytotoxicity screening assay using a multiwell fluorescence scanner.
Bond, JM; Gores, GJ; Herman, B; Imberti, R; Lemasters, JJ; Nieminen, AL, 1992
)
0.47
" Dihydroergocryptine antagonized both the neuronal death produced by acute exposure to a toxic glutamate concentration as well as the normal age-dependent degeneration in culture."( Protection by dihydroergocryptine of glutamate-induced neurotoxicity.
Aleppo, G; Canonico, PL; Favit, A; Scapagnini, U; Sortino, MA, 1993
)
0.29
" Therefore, the purpose of this study was to address whether CsA is directly toxic to renal parenchymal cells in a primary culture system of rat renal cortical epithelial cells."( An in vitro model of cyclosporine-induced nephrotoxicity.
Acosta, D; Jiang, T, 1993
)
0.29
"In this study the toxic effects of chromium, nickel, and cobalt extracts on in vitro cultured lymphocytes were evaluated."( Assessment of metal extract toxicity on human lymphocytes cultured in vitro.
Cavedagna, D; Ciapetti, G; Donati, ME; Granchi, D; Pizzoferrato, A; Savarino, L, 1996
)
0.29
" In serum-deprived cultures, LD50 values were 140."( Heavy-metal toxicity in an insect cell line. Effects of cadmium chloride, mercuric chloride and methylmercuric chloride on cell viability and proliferation in Aedes albopictus cells.
Braeckman, B; Raes, H; Van Hoye, D, 1997
)
0.3
" With further experimentation, it appeared that a sustained release of volatile substances still present in one extract exerted a toxic effect in neighboring cultures."( False positive results in cytotoxicity testing due to unexpectedly volatile compounds.
Ciapetti, G; Gori, A; Granchi, D; Pizzoferrato, A; Savarino, L; Savioli, F; Stea, S; Verri, E, 1998
)
0.3
" Cisplatin reduced body weight gain and spleen weight during treatment and was much more toxic than NAMI-A on liver sinusoids, kidney tubules, and lung epithelium."( In vitro cell cycle arrest, in vivo action on solid metastasizing tumors, and host toxicity of the antimetastatic drug NAMI-A and cisplatin.
Alessio, E; Bergamo, A; Furlani, A; Gagliardi, R; Mestroni, G; Sava, G; Scarcia, V, 1999
)
0.3
" The purpose of the present study was to evaluate the toxic effects of pentoxifylline on two standardized cell lines of epithelial origin."( Toxicity of pentoxifylline on monolayers of highly proliferative cells of epithelial origin.
Böhnke, M; Ventura, AC, 1999
)
0.3
" When PTH(1 - 34) at a lower concentration (1 nM) was added to the culture medium and its toxic effects examined using a propidium iodide intercalation method, significant toxicity was seen 3 days after exposure and increased with time."( Adverse effects of an active fragment of parathyroid hormone on rat hippocampal organotypic cultures.
Ezawa, I; Hirasawa, T; Kudo, Y; Miyakawa, H; Mizushima, A; Morita, M; Nakamura, T, 2000
)
0.51
" Gliotoxin is a toxic epipolythiodioxopiperazine metabolite produced by the pathogens."( Gliotoxin-induced cytotoxicity proceeds via apoptosis and is mediated by caspases and reactive oxygen species in LLC-PK1 cells.
Goping, G; Hirszel, P; Zhao, A; Zhou, X, 2000
)
0.31
"The potential toxic effects of the metabotropic glutamate receptor agonist (1S,3R)-1-aminocyclopentane-1,3-dicarboxylic acid (ACPD) and its interactions with the N-methyl-D-aspartate (NMDA) receptor were studied in hippocampal brain slice cultures, using densitometric measurements of the cellular uptake of propidium iodide (PI) to quantify neuronal degeneration."( The metabotropic glutamate receptor agonist 1S,3R-ACPD stimulates and modulates NMDA receptor mediated excitotoxicity in organotypic hippocampal slice cultures.
Blaabjerg, M; Bonde, C; Kristensen, BW; Zimmer, J, 2001
)
0.48
" These data support strict anaerobic glucose utilization in the presence of toxic levels of MPP+."( D-(+)-glucose rescue against 1-methyl-4-phenylpyridinium toxicity through anaerobic glycolysis in neuroblastoma cells.
Mazzio, E; Soliman, KF, 2003
)
0.32
" Tetrahydrobiopterin, an essential cofactor for tyrosine hydroxylase, may act as an antioxidant in dopaminergic neurones and protects against the toxic consequences of glutathione depletion."( Tetrahydrobiopterin precursor sepiapterin provides protection against neurotoxicity of 1-methyl-4-phenylpyridinium in nigral slice cultures.
Gramsbergen, JB; Hesslinger, C; Jansen, P; Madsen, JT; Meyer, M; Zimmer, J, 2003
)
0.32
" These findings suggest that gp120 is toxic to neurons even in the absence of the virus and that the toxic mechanism involves primarily activation of CXCR4 receptor."( The chemokine receptor CXCR4 and not the N-methyl-D-aspartate receptor mediates gp120 neurotoxicity in cerebellar granule cells.
Bachis, A; Mocchetti, I, 2004
)
0.32
" Here, we show that 5% BSA is toxic to reconstructed epidermis and keratinocytes which was consistent with the earlier findings."( The impact of skin viability on drug metabolism and permeation -- BSA toxicity on primary keratinocytes.
Haberland, A; Kleuser, B; Korting, HC; Maia, CS; Rübbelke, MK; Schäfer-Korting, M; Schaller, M; Schimke, I; Schreiber, S, 2006
)
0.33
" Further, this EtOH exposure and withdrawal regimen sensitizes the hippocampus to the toxic effects of Abeta treatment in a manner reflecting over activity of NMDA receptor function."( Ethanol exposure and withdrawal sensitizes the rat hippocampal CA1 pyramidal cell region to beta-amyloid (25-35)-induced cytotoxicity: NMDA receptor involvement.
Mulholland, PJ; Prendergast, MA; Self, RL; Smith, KJ, 2005
)
0.33
" We introduce a protocol to monitor toxic effects of two non-viral lipid-based gene delivery protocols using CNS primary tissue."( Toxic effects of lipid-mediated gene transfer in ventral mesencephalic explant cultures.
Bauer, M; Gasser, T; Kristensen, BW; Meyer, M; Ueffing, M; Widmer, HR; Zimmer, J, 2006
)
0.33
" The effect of the three least toxic amiodarone analogs on the human ether-a-go-go-related gene (hERG) channel was compared with amiodarone."( Hepatocellular toxicity and pharmacological effect of amiodarone and amiodarone derivatives.
Brecht, K; Follath, F; Ha, HR; Konrad, D; Krähenbühl, S; Thomet, U; Török, M; Waldhauser, KM, 2006
)
0.33
"US-mediated AS-ODNs transfection enhanced by phospholipids-based microbubbles represents an effective and safe avenue."( Comparing transfection efficiency and safety for antisense oligodeoxyribonucleotide between phospholipids-based microbubbles and liposomes.
Liang, HD; Lin, Q; Lu, CT; Luo, YK; Mei, XG; Tang, J; Zhang, Y; Zhao, YZ, 2006
)
0.33
" The test compound used was the metabotropic glutamate receptor antagonist, L(+)-2-amino-3-phosphonopropionic acid (L-AP3), which is known to be toxic in vivo after subchronic, but not acute, administration."( Long-term, repeated dose in vitro neurotoxicity of the glutamate receptor antagonist L-AP3, demonstrated in rat hippocampal slice cultures by using continuous propidium iodide incubation.
Blaabjerg, M; Kristensen, BW; Noraberg, J; Zimmer, J, 2007
)
0.54
" More active, stable and less toxic CPPs can be designed by optimizing the position and number of R, D-R, X and B residues."( Cell-penetrating peptides as transporters for morpholino oligomers: effects of amino acid composition on intracellular delivery and cytotoxicity.
Hassinger, JN; Iversen, PL; Lovejoy, CE; Moulton, HM; Nelson, MH; Wu, RP; Youngblood, DS, 2007
)
0.34
" The present study was designed to explore the toxic effect of 1-methylhydantoin on renal proximal tubular cells in vitro."( 1-Methylhydantoin cytotoxicity on renal proximal tubular cells in vitro.
Jiang, YS; Li, CZ; Liu, D; Liu, FY; Peng, YM; Yang, B, 2007
)
0.34
" Therefore, we compared in these two cell types the toxic effects of the preservative, benzalkonium chloride (BAC); its toxicity has been often reported on conjunctival in vivo and in vitro models."( Comparative study on the cytotoxic effects of benzalkonium chloride on the Wong-Kilbourne derivative of Chang conjunctival and IOBA-NHC cell lines.
Baudouin, C; Brasnu, E; Brignole-Baudouin, F; Riancho, L; Warnet, JM, 2008
)
0.35
" Abeta is toxic to neurons, possibly through causing initial synaptic dysfunction and neuronal membrane dystrophy, promoted by increased cellular Ca(2+)."( Calpastatin overexpression attenuates amyloid-beta-peptide toxicity in differentiated PC12 cells.
Barnoy, S; Kosower, NS; Vaisid, T, 2008
)
0.35
" The most toxic of the group was 2-nitro-1-propanol."( Short chain aliphatic beta-nitro alcohols for corneoscleral cross-linking: corneal endothelial toxicity studies.
Braunstein, RE; Paik, DC; Trokel, SL; Wen, Q, 2008
)
0.35
" Although the OT compounds exhibited varying levels of cytotoxicity, diphenylmethyltin chloride was more toxic than 1,4-bis (diphenylchlorostannyl)p-xylene on all cell lines tested."( Cytotoxic effects of two organotin compounds and their mode of inflicting cell death on four mammalian cancer cells.
Aguilera, RJ; Carrasco, YP; Costanzo, M; Pannell, KH; Varela-Ramirez, A, 2011
)
0.37
" They are known to distribute to many organs of the body, and while some evidence suggests that these nanoparticles are toxic to cells, the mechanism of their toxicity is not clear."( Cationic nanoparticles induce caspase 3-, 7- and 9-mediated cytotoxicity in a human astrocytoma cell line.
Bexiga, MG; Dawson, KA; Fenaroli, F; Lynch, I; Salvati, A; Simpson, JC; Varela, JA; Wang, F, 2011
)
0.37
" Methanol and ethanol were the least toxic cryoprotectants tested."( Studies on cryoprotectant toxicity to zebrafish (Danio rerio) ovarian tissue fragments.
Anil, S; Ghafari, F; Rawson, DM; Zampolla, T; Zhang, T,
)
0.13
" Cytotoxicity tests demonstrated the dose-dependent toxic effect of voriconazole on HCECs."( Cytotoxicity of voriconazole on cultured human corneal endothelial cells.
Han, SB; Hyon, JY; Shin, YJ; Wee, WR, 2011
)
0.37
" However, little is known about the toxic effect of BQ components on endothelial cells that play important roles for angiogenesis, carcinogenesis, tissue fibrosis, and cardiovascular diseases."( Arecoline induced cell cycle arrest, apoptosis, and cytotoxicity to human endothelial cells.
Chang, JZ; Chang, MC; Chi, LY; Hsu, ML; Jeng, JH; Su, CY; Tseng, SK; Tseng, WY; Yeung, SY, 2012
)
0.38
" We have used mixed neuronal-glial cerebellar cultures (NGCCs) and organotypic cerebellar cultures (OCCs) obtained from postnatal mice to assess the toxic effect of the Aβ oligomer 1-40 (Aβ1-40) after propidium iodide uptake in vitro."( Context-dependent toxicity of amyloid-β peptides on mouse cerebellar cells.
Aimar, P; Alasia, S; Lossi, L; Merighi, A, 2012
)
0.57
" However, the tissue surrounding the CuIUD is exposed to toxic Cu ion levels."( Concentration-dependent cytotoxicity of copper ions on mouse fibroblasts in vitro: effects of copper ion release from TCu380A vs TCu220C intra-uterine devices.
Burugapalli, K; Cao, B; Ma, Y; Song, W; Xi, T; Yang, H; Zhang, C; Zheng, Y, 2012
)
0.38
" Results demonstrate that smaller size of MWCNT seems to be more toxic than that of larger one."( In vitro toxicity of multi-walled carbon nanotubes in C6 rat glioma cells.
Han, YG; Li, ZG; Ren, GG; Xu, J; Yang, Z, 2012
)
0.38
"The utility of any model system for toxicity screening depends on the level of correlation between test responses and toxic reactions in humans."( Toxicity ranking of heavy metals with screening method using adult Caenorhabditis elegans and propidium iodide replicates toxicity ranking in rat.
Hunt, PR; Olejnik, N; Sprando, RL, 2012
)
0.6
" Nanoparticles are usually more toxic to some cell subpopulations than others, and toxicity often varies with cell cycle."( Single-cell nanotoxicity assays of superparamagnetic iron oxide nanoparticles.
Eustaquio, T; Leary, JF, 2012
)
0.38
"Zoledronate, at 100μM, was toxic to all types of cells tested, while its toxicity varied among cells at both 1 and 10μM."( In vitro cytotoxicity of zoledronate (nitrogen-containing bisphosphonate: NBP) and/or etidronate (non-NBP) in tumour cells and periodontal cells.
Dohdoh, M; Endo, Y; Kuroishi, T; Nagai, Y; Ohki, A; Oizumi, T; Sugawara, S; Tanaka, Y, 2013
)
0.39
"DiI is a convenient method for ASCs labeling which causes no toxic effects and does not impair the proliferation, migration or differentiation potential of ASCs after the labeling procedure."( DiI labeling of human adipose-derived stem cells: evaluation of DNA damage, toxicity and functional impairment.
Froelich, K; Hackenberg, S; Hagen, R; Kleinsasser, N; Radeloff, A; Ramos Tirado, M; Scherzed, A; Schmidt, K; Steussloff, G; Technau, A, 2013
)
0.39
"Combinations of trypan blue (TB), Brilliant Blue G (BBG) and polyethyleneglycol had been shown before to be less toxic to ARPE retinal pigment epithelial cells than TB alone."( Brilliant Blue G as protective agent against trypan blue toxicity in human retinal pigment epithelial cells in vitro.
Awad, D; Bartok, M; Gabel, D; Mohr, A; Schrader, I; Sudumbrekar, N, 2013
)
0.39
"075 % and higher was toxic to the cells already after 30 min incubation."( Brilliant Blue G as protective agent against trypan blue toxicity in human retinal pigment epithelial cells in vitro.
Awad, D; Bartok, M; Gabel, D; Mohr, A; Schrader, I; Sudumbrekar, N, 2013
)
0.39
" It was concluded that, regardless of the increase in enamel hardness due to the application of fluoride solutions, the treated enamel surface did not prevent the toxic effects caused by the 16% CP gel to odontoblast-like cells."( Effect of fluoride-treated enamel on indirect cytotoxicity of a 16% carbamide peroxide bleaching gel to pulp cells.
de Souza Costa, CA; Hebling, J; Lima, AF; Ribeiro, AP; Sacono, NT; Soares, DG, 2013
)
0.39
"Fluoroquinolones are in wide clinical use as safe and effective antibiotics."( Toxic effects of levofloxacin on rat annulus fibrosus cells: an in-vitro study.
Bai, ZL; Chen, Q; Ding, WY; Wang, HY; Yang, DL; Yang, SD; Zhang, F, 2014
)
0.4
"Our study results suggest that levofloxacin has cytotoxic effects on RAF cells, characterized by enhancing apoptosis and reducing cell viability, and indicate a potential toxic effect of fluoroquinolones on RAF cells."( Toxic effects of levofloxacin on rat annulus fibrosus cells: an in-vitro study.
Bai, ZL; Chen, Q; Ding, WY; Wang, HY; Yang, DL; Yang, SD; Zhang, F, 2014
)
0.4
" AT3 variants carrying the expanded polyQ are prone to associate with each other into amyloid toxic aggregates, which are responsible for neuronal death with ensuing neurodegeneration."( The Toxic Effects of Pathogenic Ataxin-3 Variants in a Yeast Cellular Model.
Bonanomi, M; Invernizzi, G; Regonesi, ME; Tortora, P; Visentin, C, 2015
)
0.42
" In contrast, the concentrations of PMA tested had no toxic effect on the viability of Vibrio cells studied."( Ethidium and propidium monoazide: comparison of potential toxicity on Vibrio sp. viability.
Bonnin-Jusserand, M; Copin, S; Grard, T; Midelet, G; Mougin, J; Raguenet, V; Robert-Pillot, A, 2021
)
0.99
" Overall, TEGDMA induces various toxic effects in macrophages, including cytotoxicity, apoptosis, and genotoxicity."( Protective Effect of Rutin on Triethylene Glycol Dimethacrylate-Induced Toxicity through the Inhibition of Caspase Activation and Reactive Oxygen Species Generation in Macrophages.
Chang, YC; Huang, FM; Kuan, YH; Su, NY; Yang, LC; Yeh, KL, 2022
)
0.72

Compound-Compound Interactions

Propidium monoazide (PMA) combined with real-time polymerase chain reaction (qPCR) is popular because of its specificity, sensitivity, and speed. In this work, a protocol has been optimized and validated for L. paracasei.

ExcerptReferenceRelevance
" In addition, the dye is valuable in combination with phycoerythrin (PE)-fluorescence dual-color flow cytometry on a single argon laser instrument, since its emission in the far red can easily be separated from the emission of PE; 7-AAD was used on fluoresceinisothiocyanate (FITC) and PE surface-labeled human thymocytes for characterization of the dying subpopulation of cells which is undergoing programmed cell death."( Dead cell discrimination with 7-amino-actinomycin D in combination with dual color immunofluorescence in single laser flow cytometry.
Braun, J; Giorgi, JV; Krall, WJ; Schmid, I; Uittenbogaart, CH, 1992
)
0.28
" The method, in combination with quantitative PCR as a diagnostic tool, successfully monitored the disinfection efficacy of hypochlorite, benzalkonium and heat on several model pathogens."( Molecular monitoring of disinfection efficacy using propidium monoazide in combination with quantitative PCR.
Camper, AK; Nocker, A; Sossa, KE, 2007
)
0.59
" leprae antigen(s), in combination with immunomodulators murabutide (MB) and a Trat peptide in particulate form (liposome)."( Inhibition of apoptosis, activation of NKT cell and upregulation of CD40 and CD40L mediated by M. leprae antigen(s) combined with Murabutide and Trat peptide in leprosy patients.
Bisht, V; Chattree, V; Khanna, N; Rao, DN, 2008
)
0.35
" We determined cyto- and photo-cytotoxic effect on the cells viability (MTT assay) after standard PDR and PDR combined with EP."( Cellular stress induced by photodynamic reaction with CoTPPS and MnTMPyPCl5 in combination with electroporation in human colon adenocarcinoma cell lines (LoVo and LoVoDX).
Choromańska, A; Daczewska, M; Garbiec, A; Jachimska, B; Kamińska, I; Kotulska, M; Kulbacka, J; Rembiałkowska, N; Rossowska, J; Saczko, J, 2013
)
0.39
" sobrinus, using PMA combined with real-time PCR (PMA-qPCR)."( Monitoring the prevalence of viable and dead cariogenic bacteria in oral specimens and in vitro biofilms by qPCR combined with propidium monoazide.
Ansai, T; Awano, S; Maki, K; Morikawa, K; Nakamura, S; Soh, I; Yasunaga, A; Yoshida, A, 2013
)
0.6
" In addition three other human tumour cell lines (A549: lung, LN-229: glioblastoma, PANC-1: pancreas) were tested for the combination with camptothecin."( Comparison of the effects of photon versus carbon ion irradiation when combined with chemotherapy in vitro.
Brons, S; Combs, SE; Debus, J; Haberer, T; Schlaich, F; Weber, KJ, 2013
)
0.39
" In combination with chemotherapy additive toxicity was the prevailing effect."( Comparison of the effects of photon versus carbon ion irradiation when combined with chemotherapy in vitro.
Brons, S; Combs, SE; Debus, J; Haberer, T; Schlaich, F; Weber, KJ, 2013
)
0.39
" The aim of this study was to use propidium monoazide (PMA) combined with the quantitative polymerase chain reaction (PMA-qPCR) to selectively detect and quantify viable bacteria cells in full-scale WWTPs in China."( Quantification of viable bacteria in wastewater treatment plants by using propidium monoazide combined with quantitative PCR (PMA-qPCR).
He, M; Li, D; Lin, Y; Tong, T; Wu, S; Zeng, S, 2014
)
0.91
" Among all the methods for detecting viability, propidium monoazide (PMA) combined with real-time PCR is popular because of its specificity, sensitivity, and speed."( Enumeration of viable non-culturable Vibrio cholerae using propidium monoazide combined with quantitative PCR.
Kan, B; Liang, W; Wu, B, 2015
)
0.92
" Shifts in the bacterial community compositions in secondary effluent samples upon chlorine disinfection, both immediately and after 24 h of storage, were investigated using Illumina MiSeq sequencing combined with propidium monoazide (PMA) treatment."( Shifts of live bacterial community in secondary effluent by chlorine disinfection revealed by Miseq high-throughput sequencing combined with propidium monoazide treatment.
Hu, HY; Huo, ZY; Pang, YC; Xi, JY; Xu, Y, 2016
)
0.82
"19 kV/cm sub-microsecond pulses was used to permeabilize pathogenic yeast Candida albicans separately and in combination with conventional square wave electroporation (8-17 kV/cm, 100 μs)."( Membrane Permeabilization of Pathogenic Yeast in Alternating Sub-microsecond Electromagnetic Fields in Combination with Conventional Electroporation.
Girkontaitė, I; Grainys, A; Lastauskienė, E; Markovskaja, S; Novickij, J; Novickij, V; Paškevičius, A; Staigvila, G; Švedienė, J; Zinkevičienė, A, 2018
)
0.48
" paracasei) in fermented milk accurately and quickly, propidium monoazide combined with quantitative loop-mediated isothermal amplification (PMA-qLAMP) was applied."( Detection of viable Lacticaseibacillus paracasei in fermented milk using propidium monoazide combined with quantitative loop-mediated isothermal amplification.
Cui, L; Feng, L; Hu, L; Wang, S; Xue, Y; Zhang, D; Zhang, W, 2021
)
1.1

Bioavailability

ExcerptReferenceRelevance
" The dosimetry analysis revealed that the EMF threshold level required to induce the uptake of the large (46 nm) nanopsheres was between three and six EMF doses, with a specific absorption rate (SAR) of 3 kW/kg and 5 kW/kg per exposure, respectively, depending on the bacterial taxa being studied."( The Bioeffects Resulting from Prokaryotic Cells and Yeast Being Exposed to an 18 GHz Electromagnetic Field.
Baulin, V; Crawford, RJ; Croft, RJ; Ivanova, EP; Nguyen, SH; Nguyen, TH; Pham, VT; Phillips, B, 2016
)
0.43

Dosage Studied

Propidium iodide (PI) penetration into the cytoplasm of individual cells during dosing with chlorhexidine.

ExcerptRelevanceReference
" Reproducible dose-response curves were obtained for 6 drugs tested."( The PIT method: an automated in vitro technique for drug toxicity testing.
Lelieveld, P; van Lambalgen, R, 1987
)
0.27
" A reproducible dose-response curve with FM3A was obtained between crude CPE at 13."( Flow cytometric assay for cytotoxic activity of crude Clostridium perfringens enterotoxin using non-adherent cell FM3A.
Hu, D; Kusunoki, H; Sugii, S; Uemura, T, 1995
)
0.29
" Moreover, the assessment of cellular functions in parasites treated with increasing concentrations of drugs certified the capacity of these techniques to establish dose-response curves and to permit the detection of side effects."( Leishmania infantum promastigotes: flow cytometry as a possible tool for assessing the effects of drugs on cellular functions.
Azas, N; Delmas, F; Di Giorgio, C; Gasquet, M; Timon-David, P, 1997
)
0.3
"Our aim was to compare and evaluate apoptosis formation as detected by propidium-iodide (PI)/annexin-V or PI/fluorescein-diacetate (FDA) as dose-response parameters in a human promyelocytic leukemia cell line, HL60."( Comparative analysis of apoptosis in HL60 detected by annexin-V and fluorescein-diacetate.
Bartkowiak, D; Baust, H; Högner, S; Nothdurft, W; Röttinger, EM, 1999
)
0.54
" To evaluate the effect of these modifications on assay sensitivity, dose-response curves are presented for DNA damage induced by exposure of TK6 cells to low concentrations of hydrogen peroxide (0-10 microM) and for exposure of human lymphocytes to X-irradiation (0-100 cGy)."( Comet assay: rapid processing of multiple samples.
Bellier, PV; Ferrarotto, CL; McLean, JR; McNamee, JP, 2000
)
0.31
" Clear dose-response relationships were found in all of the performed experiments and interesting differential cytotoxicity patterns were observed."( Antiproliferative activity of an aqueous mistletoe extract in human tumor cell lines and xenografts in vitro.
Burger, AM; Fiebig, HH; Mengs, U; Schüler, JB, 2001
)
0.31
" Detection relies on monitoring the kinetics of propidium iodide (PI) penetration into the cytoplasm of individual cells during dosing with chlorhexidine."( Action of chlorhexidine digluconate against yeast and filamentous forms in an early-stage Candida albicans biofilm.
Suci, PA; Tyler, BJ, 2002
)
0.57
" Also, the dual-luciferase reporter vectors encoding Photinus pyralis firefly or Renilla reniformis luciferase showed a linear increase in dose-response with increasing amounts of transfected DNA, but at higher levels of transfected DNA, a reduction in expressed levels of luciferase activity resulted."( Inhibitory effects associated with use of modified Photinus pyralis and Renilla reniformis luciferase vectors in dual reporter assays and implications for analysis of ISGs.
Cutler, SJ; Ghazawi, I; Low, P; Mellick, AS; Ralph, SJ, 2005
)
0.33
" PI+ exhibited a high variation from 230 to 10mOsm/kg which was considered as a dose-response curve."( Response of goat sperm to hypoosmotic steps modelled probit analysis.
Furstoss, V; Guillouet, P; Kerboeuf, D; Le Vern, Y; Leboeuf, B; Magistrini, M, 2006
)
0.33
" Cells were dosed with a concentration range of nickel and chromium (0-10,000 microM) and cellular mitochondrial activity, viability, metal uptake and cytokine release were measured."( The effects of nickel and chromium on human keratinocytes: differences in viability, cell associated metal and IL-1alpha release.
Balafa, C; Curtis, A; Evans, GS; Gawkrodger, DJ; MacNeil, S; Morton, J; Warren, ND, 2007
)
0.34
" Their combination induced very potent cytotoxic action on rat thymocytes with "bell-shape" dose-response relation."( Synergic cytotoxic action induced by simultaneous application of zinc and clotrimazole in rat thymocytes.
Ishida, S; Matsui, H; Morimoto, M; Nishimura, Y; Okano, Y; Oyama, Y; Sakanashi, Y, 2007
)
0.34
" Here, we report that long-term treatment of lower dosage LPS mainly causes upregulation of Id2 protein."( Long-term intraperitoneal injection of lipopolysaccharide induces high expression of Id2 in the brain of mice.
Hu, BX; Hu, XF; Huang, WH; Jiang, X; Niu, ZZ; Ouyang, J; Qiu, XZ; Wang, LY; Wu, JM; Yu, L, 2011
)
0.37
"The clinical efficacy of conventional chemotherapeutic agent, methotrexate (MTX), can be limited by its very short plasma half-life, the drug resistance, and the high dosage required for cancer cell suppression."( Inorganic nanovehicle targets tumor in an orthotopic breast cancer model.
Choi, G; Choy, JH; Kwon, OJ; Oh, Y; Yun, CO, 2014
)
0.4
"25 g L(-1) dosage increased from 8 to 68 %, the percentage of intact cells decreased from 94."( Effects of Fructus ligustri lucidi on the growth, cell integrity, and metabolic activity of the Microcystis aeruginosa.
Ge, H; Wu, Y; Zhou, Z, 2015
)
0.42
" Previously, we have shown that ribavirin when applied in clinically relevant dosage (10 μM) modulates activated microglia in complex fashion inducing both anti- and proinflammatory effects, simultaneously causing cytotoxicity."( Low-dose ribavirin treatments attenuate neuroinflammatory activation of BV-2 Cells by interfering with inducible nitric oxide synthase.
Bjelobaba, I; Bozic, I; Jovanovic, M; Laketa, D; Lavrnja, I; Nedeljkovic, N; Pekovic, S; Savic, D; Stojiljkovic, M, 2015
)
0.42
[information is derived through text-mining from research data collected from National Library of Medicine (NLM), extracted Dec-2023]

Roles (2)

RoleDescription
intercalatorA role played by a chemical agent which exhibits the capability of occupying space between DNA base pairs due to particular properties in size, shape and charge. Intercalation of chemical compounds in DNA helix can result in replication errors (shift, mutation) or DNA damages.
fluorochromeA fluorescent dye used to stain biological specimens.
[role information is derived from Chemical Entities of Biological Interest (ChEBI), Hastings J, Owen G, Dekker A, Ennis M, Kale N, Muthukrishnan V, Turner S, Swainston N, Mendes P, Steinbeck C. (2016). ChEBI in 2016: Improved services and an expanding collection of metabolites. Nucleic Acids Res]

Drug Classes (2)

ClassDescription
phenanthridinesAny dibenzopyridine based on the skeleton of phenanthridine and its substituted derivatives thereof.
quaternary ammonium ionA derivative of ammonium, NH4(+), in which all four of the hydrogens bonded to nitrogen have been replaced with univalent (usually organyl) groups.
[compound class information is derived from Chemical Entities of Biological Interest (ChEBI), Hastings J, Owen G, Dekker A, Ennis M, Kale N, Muthukrishnan V, Turner S, Swainston N, Mendes P, Steinbeck C. (2016). ChEBI in 2016: Improved services and an expanding collection of metabolites. Nucleic Acids Res]

Protein Targets (45)

Potency Measurements

ProteinTaxonomyMeasurementAverage (µ)Min (ref.)Avg (ref.)Max (ref.)Bioassay(s)
Chain A, MAJOR APURINIC/APYRIMIDINIC ENDONUCLEASEHomo sapiens (human)Potency18.16950.003245.467312,589.2998AID2517
Chain A, 2-oxoglutarate OxygenaseHomo sapiens (human)Potency2.51190.177814.390939.8107AID2147
Chain A, ATP-DEPENDENT DNA HELICASE Q1Homo sapiens (human)Potency23.35070.125919.1169125.8920AID2549
phosphopantetheinyl transferaseBacillus subtilisPotency39.15120.141337.9142100.0000AID1490
USP1 protein, partialHomo sapiens (human)Potency7.94330.031637.5844354.8130AID504865
TDP1 proteinHomo sapiens (human)Potency2.58070.000811.382244.6684AID686978; AID686979
Microtubule-associated protein tauHomo sapiens (human)Potency3.78420.180013.557439.8107AID1460; AID1468
euchromatic histone-lysine N-methyltransferase 2Homo sapiens (human)Potency5.01190.035520.977089.1251AID504332
Bloom syndrome protein isoform 1Homo sapiens (human)Potency5.01190.540617.639296.1227AID2528
cytochrome P450 2D6 isoform 1Homo sapiens (human)Potency6.30960.00207.533739.8107AID891
cytochrome P450 2C19 precursorHomo sapiens (human)Potency1.58490.00255.840031.6228AID899
cytochrome P450 2C9 precursorHomo sapiens (human)Potency12.58930.00636.904339.8107AID883
15-hydroxyprostaglandin dehydrogenase [NAD(+)] isoform 1Homo sapiens (human)Potency15.84890.001815.663839.8107AID894
runt-related transcription factor 1 isoform AML1bHomo sapiens (human)Potency1.00260.02007.985839.8107AID504374; AID504375
vitamin D3 receptor isoform VDRAHomo sapiens (human)Potency8.91250.354828.065989.1251AID504847
thyroid hormone receptor beta isoform aHomo sapiens (human)Potency34.42220.010039.53711,122.0200AID1469; AID1479
core-binding factor subunit beta isoform 2Homo sapiens (human)Potency1.00260.02007.985839.8107AID504374; AID504375
nuclear receptor ROR-gamma isoform 1Mus musculus (house mouse)Potency2.83710.00798.23321,122.0200AID2546; AID2551
DNA polymerase kappa isoform 1Homo sapiens (human)Potency5.26900.031622.3146100.0000AID588579
cytochrome P450 3A4 isoform 1Homo sapiens (human)Potency15.84890.031610.279239.8107AID884; AID885
histone acetyltransferase KAT2A isoform 1Homo sapiens (human)Potency11.22020.251215.843239.8107AID504327
caspase-1 isoform alpha precursorHomo sapiens (human)Potency2.51190.000311.448431.6228AID900
Gamma-aminobutyric acid receptor subunit piRattus norvegicus (Norway rat)Potency15.84891.000012.224831.6228AID885
Gamma-aminobutyric acid receptor subunit beta-1Rattus norvegicus (Norway rat)Potency15.84891.000012.224831.6228AID885
Gamma-aminobutyric acid receptor subunit deltaRattus norvegicus (Norway rat)Potency15.84891.000012.224831.6228AID885
Gamma-aminobutyric acid receptor subunit gamma-2Rattus norvegicus (Norway rat)Potency15.84891.000012.224831.6228AID885
Gamma-aminobutyric acid receptor subunit alpha-5Rattus norvegicus (Norway rat)Potency15.84891.000012.224831.6228AID885
Gamma-aminobutyric acid receptor subunit alpha-3Rattus norvegicus (Norway rat)Potency15.84891.000012.224831.6228AID885
Gamma-aminobutyric acid receptor subunit gamma-1Rattus norvegicus (Norway rat)Potency15.84891.000012.224831.6228AID885
Gamma-aminobutyric acid receptor subunit alpha-2Rattus norvegicus (Norway rat)Potency15.84891.000012.224831.6228AID885
Gamma-aminobutyric acid receptor subunit alpha-4Rattus norvegicus (Norway rat)Potency15.84891.000012.224831.6228AID885
Gamma-aminobutyric acid receptor subunit gamma-3Rattus norvegicus (Norway rat)Potency15.84891.000012.224831.6228AID885
Gamma-aminobutyric acid receptor subunit alpha-6Rattus norvegicus (Norway rat)Potency15.84891.000012.224831.6228AID885
Histamine H2 receptorCavia porcellus (domestic guinea pig)Potency12.58930.00638.235039.8107AID883
Caspase-7Homo sapiens (human)Potency2.51193.981118.585631.6228AID889
Gamma-aminobutyric acid receptor subunit alpha-1Rattus norvegicus (Norway rat)Potency15.84891.000012.224831.6228AID885
Gamma-aminobutyric acid receptor subunit beta-3Rattus norvegicus (Norway rat)Potency15.84891.000012.224831.6228AID885
Gamma-aminobutyric acid receptor subunit beta-2Rattus norvegicus (Norway rat)Potency15.84891.000012.224831.6228AID885
Inositol monophosphatase 1Rattus norvegicus (Norway rat)Potency28.18381.000010.475628.1838AID1457
GABA theta subunitRattus norvegicus (Norway rat)Potency15.84891.000012.224831.6228AID885
Gamma-aminobutyric acid receptor subunit epsilonRattus norvegicus (Norway rat)Potency15.84891.000012.224831.6228AID885
[prepared from compound, protein, and bioassay information from National Library of Medicine (NLM), extracted Dec-2023]

Inhibition Measurements

ProteinTaxonomyMeasurementAverageMin (ref.)Avg (ref.)Max (ref.)Bioassay(s)
CholinesteraseHomo sapiens (human)IC50 (µMol)17.26300.00001.559910.0000AID1799184
CholinesteraseHomo sapiens (human)Ki4.06330.00001.51739.7300AID1799827; AID1886742
AcetylcholinesteraseMus musculus (house mouse)Ki0.66000.00001.42829.3000AID1800423
AcetylcholinesteraseHomo sapiens (human)IC50 (µMol)17.26300.00000.933210.0000AID1799184
AcetylcholinesteraseHomo sapiens (human)Ki4.14000.00001.27869.7300AID1799827; AID1800423
Acetylcholinesterase Bos taurus (cattle)IC50 (µMol)17.26300.00000.61068.7000AID1799184
[prepared from compound, protein, and bioassay information from National Library of Medicine (NLM), extracted Dec-2023]

Biological Processes (42)

Processvia Protein(s)Taxonomy
xenobiotic metabolic processCholinesteraseHomo sapiens (human)
learningCholinesteraseHomo sapiens (human)
negative regulation of cell population proliferationCholinesteraseHomo sapiens (human)
neuroblast differentiationCholinesteraseHomo sapiens (human)
peptide hormone processingCholinesteraseHomo sapiens (human)
response to alkaloidCholinesteraseHomo sapiens (human)
cocaine metabolic processCholinesteraseHomo sapiens (human)
negative regulation of synaptic transmissionCholinesteraseHomo sapiens (human)
response to glucocorticoidCholinesteraseHomo sapiens (human)
response to folic acidCholinesteraseHomo sapiens (human)
choline metabolic processCholinesteraseHomo sapiens (human)
acetylcholine catabolic processCholinesteraseHomo sapiens (human)
acetylcholine catabolic process in synaptic cleftAcetylcholinesteraseHomo sapiens (human)
regulation of receptor recyclingAcetylcholinesteraseHomo sapiens (human)
osteoblast developmentAcetylcholinesteraseHomo sapiens (human)
acetylcholine catabolic processAcetylcholinesteraseHomo sapiens (human)
cell adhesionAcetylcholinesteraseHomo sapiens (human)
nervous system developmentAcetylcholinesteraseHomo sapiens (human)
synapse assemblyAcetylcholinesteraseHomo sapiens (human)
receptor internalizationAcetylcholinesteraseHomo sapiens (human)
negative regulation of synaptic transmission, cholinergicAcetylcholinesteraseHomo sapiens (human)
amyloid precursor protein metabolic processAcetylcholinesteraseHomo sapiens (human)
positive regulation of protein secretionAcetylcholinesteraseHomo sapiens (human)
retina development in camera-type eyeAcetylcholinesteraseHomo sapiens (human)
acetylcholine receptor signaling pathwayAcetylcholinesteraseHomo sapiens (human)
positive regulation of cold-induced thermogenesisAcetylcholinesteraseHomo sapiens (human)
proteolysisCaspase-7Homo sapiens (human)
apoptotic processCaspase-7Homo sapiens (human)
heart developmentCaspase-7Homo sapiens (human)
response to UVCaspase-7Homo sapiens (human)
protein processingCaspase-7Homo sapiens (human)
protein catabolic processCaspase-7Homo sapiens (human)
defense response to bacteriumCaspase-7Homo sapiens (human)
fibroblast apoptotic processCaspase-7Homo sapiens (human)
striated muscle cell differentiationCaspase-7Homo sapiens (human)
neuron apoptotic processCaspase-7Homo sapiens (human)
protein maturationCaspase-7Homo sapiens (human)
lymphocyte apoptotic processCaspase-7Homo sapiens (human)
cellular response to lipopolysaccharideCaspase-7Homo sapiens (human)
cellular response to staurosporineCaspase-7Homo sapiens (human)
execution phase of apoptosisCaspase-7Homo sapiens (human)
positive regulation of plasma membrane repairCaspase-7Homo sapiens (human)
positive regulation of neuron apoptotic processCaspase-7Homo sapiens (human)
[Information is prepared from geneontology information from the June-17-2024 release]

Molecular Functions (22)

Processvia Protein(s)Taxonomy
amyloid-beta bindingCholinesteraseHomo sapiens (human)
catalytic activityCholinesteraseHomo sapiens (human)
acetylcholinesterase activityCholinesteraseHomo sapiens (human)
cholinesterase activityCholinesteraseHomo sapiens (human)
protein bindingCholinesteraseHomo sapiens (human)
hydrolase activity, acting on ester bondsCholinesteraseHomo sapiens (human)
enzyme bindingCholinesteraseHomo sapiens (human)
choline bindingCholinesteraseHomo sapiens (human)
identical protein bindingCholinesteraseHomo sapiens (human)
amyloid-beta bindingAcetylcholinesteraseHomo sapiens (human)
acetylcholinesterase activityAcetylcholinesteraseHomo sapiens (human)
cholinesterase activityAcetylcholinesteraseHomo sapiens (human)
protein bindingAcetylcholinesteraseHomo sapiens (human)
collagen bindingAcetylcholinesteraseHomo sapiens (human)
hydrolase activityAcetylcholinesteraseHomo sapiens (human)
serine hydrolase activityAcetylcholinesteraseHomo sapiens (human)
acetylcholine bindingAcetylcholinesteraseHomo sapiens (human)
protein homodimerization activityAcetylcholinesteraseHomo sapiens (human)
laminin bindingAcetylcholinesteraseHomo sapiens (human)
amyloid-beta bindingAcetylcholinesterase Bos taurus (cattle)
protein bindingAcetylcholinesterase Bos taurus (cattle)
RNA bindingCaspase-7Homo sapiens (human)
aspartic-type endopeptidase activityCaspase-7Homo sapiens (human)
cysteine-type endopeptidase activityCaspase-7Homo sapiens (human)
protein bindingCaspase-7Homo sapiens (human)
peptidase activityCaspase-7Homo sapiens (human)
cysteine-type peptidase activityCaspase-7Homo sapiens (human)
cysteine-type endopeptidase activity involved in apoptotic processCaspase-7Homo sapiens (human)
cysteine-type endopeptidase activity involved in execution phase of apoptosisCaspase-7Homo sapiens (human)
[Information is prepared from geneontology information from the June-17-2024 release]

Ceullar Components (19)

Processvia Protein(s)Taxonomy
extracellular regionCholinesteraseHomo sapiens (human)
nuclear envelope lumenCholinesteraseHomo sapiens (human)
endoplasmic reticulum lumenCholinesteraseHomo sapiens (human)
blood microparticleCholinesteraseHomo sapiens (human)
plasma membraneCholinesteraseHomo sapiens (human)
extracellular spaceCholinesteraseHomo sapiens (human)
plasma membraneGamma-aminobutyric acid receptor subunit gamma-2Rattus norvegicus (Norway rat)
extracellular regionAcetylcholinesteraseHomo sapiens (human)
basement membraneAcetylcholinesteraseHomo sapiens (human)
extracellular spaceAcetylcholinesteraseHomo sapiens (human)
nucleusAcetylcholinesteraseHomo sapiens (human)
Golgi apparatusAcetylcholinesteraseHomo sapiens (human)
plasma membraneAcetylcholinesteraseHomo sapiens (human)
cell surfaceAcetylcholinesteraseHomo sapiens (human)
membraneAcetylcholinesteraseHomo sapiens (human)
neuromuscular junctionAcetylcholinesteraseHomo sapiens (human)
synaptic cleftAcetylcholinesteraseHomo sapiens (human)
synapseAcetylcholinesteraseHomo sapiens (human)
perinuclear region of cytoplasmAcetylcholinesteraseHomo sapiens (human)
side of membraneAcetylcholinesteraseHomo sapiens (human)
synapseAcetylcholinesterase Bos taurus (cattle)
side of membraneAcetylcholinesterase Bos taurus (cattle)
extracellular spaceCaspase-7Homo sapiens (human)
nucleusCaspase-7Homo sapiens (human)
cytoplasmCaspase-7Homo sapiens (human)
cytosolCaspase-7Homo sapiens (human)
nucleusCaspase-7Homo sapiens (human)
nucleoplasmCaspase-7Homo sapiens (human)
cytosolCaspase-7Homo sapiens (human)
plasma membraneGamma-aminobutyric acid receptor subunit alpha-1Rattus norvegicus (Norway rat)
plasma membraneGamma-aminobutyric acid receptor subunit beta-2Rattus norvegicus (Norway rat)
[Information is prepared from geneontology information from the June-17-2024 release]

Bioassays (10)

Assay IDTitleYearJournalArticle
AID1347154Primary screen GU AMC qHTS for Zika virus inhibitors2020Proceedings of the National Academy of Sciences of the United States of America, 12-08, Volume: 117, Issue:49
Therapeutic candidates for the Zika virus identified by a high-throughput screen for Zika protease inhibitors.
AID1508630Primary qHTS for small molecule stabilizers of the endoplasmic reticulum resident proteome: Secreted ER Calcium Modulated Protein (SERCaMP) assay2021Cell reports, 04-27, Volume: 35, Issue:4
A target-agnostic screen identifies approved drugs to stabilize the endoplasmic reticulum-resident proteome.
AID651635Viability Counterscreen for Primary qHTS for Inhibitors of ATXN expression
AID1886742Inhibition of human BChE assessed as inhibition constant
AID1799184AChE Inhibition Assay from Article 10.1021/jm900859q: \\Pyrano[3,2-c]quinoline-6-chlorotacrine hybrids as a novel family of acetylcholinesterase- and beta-amyloid-directed anti-Alzheimer compounds.\\2009Journal of medicinal chemistry, Sep-10, Volume: 52, Issue:17
Pyrano[3,2-c]quinoline-6-chlorotacrine hybrids as a novel family of acetylcholinesterase- and beta-amyloid-directed anti-Alzheimer compounds.
AID1799827Inhibition Assay from Article 10.1021/bi300955k: \\Probing the peripheral site of human butyrylcholinesterase.\\2012Biochemistry, Sep-11, Volume: 51, Issue:36
Probing the peripheral site of human butyrylcholinesterase.
AID1800423Assay of Substrate Hydrolysis from Article 10.1021/bi401043w: \\The natural product dihydrotanshinone I provides a prototype for uncharged inhibitors that bind specifically to the acetylcholinesterase peripheral site with nanomolar affinity.\\2013Biochemistry, Oct-22, Volume: 52, Issue:42
The natural product dihydrotanshinone I provides a prototype for uncharged inhibitors that bind specifically to the acetylcholinesterase peripheral site with nanomolar affinity.
AID588519A screen for compounds that inhibit viral RNA polymerase binding and polymerization activities2011Antiviral research, Sep, Volume: 91, Issue:3
High-throughput screening identification of poliovirus RNA-dependent RNA polymerase inhibitors.
AID540299A screen for compounds that inhibit the MenB enzyme of Mycobacterium tuberculosis2010Bioorganic & medicinal chemistry letters, Nov-01, Volume: 20, Issue:21
Synthesis and SAR studies of 1,4-benzoxazine MenB inhibitors: novel antibacterial agents against Mycobacterium tuberculosis.
AID1159607Screen for inhibitors of RMI FANCM (MM2) intereaction2016Journal of biomolecular screening, Jul, Volume: 21, Issue:6
A High-Throughput Screening Strategy to Identify Protein-Protein Interaction Inhibitors That Block the Fanconi Anemia DNA Repair Pathway.
[information is prepared from bioassay data collected from National Library of Medicine (NLM), extracted Dec-2023]

Research

Studies (2,797)

TimeframeStudies, This Drug (%)All Drugs %
pre-1990164 (5.86)18.7374
1990's527 (18.84)18.2507
2000's1076 (38.47)29.6817
2010's880 (31.46)24.3611
2020's150 (5.36)2.80
[information is prepared from research data collected from National Library of Medicine (NLM), extracted Dec-2023]

Market Indicators

Research Demand Index: 73.69

According to the monthly volume, diversity, and competition of internet searches for this compound, as well the volume and growth of publications, there is estimated to be very strong demand-to-supply ratio for research on this compound.

MetricThis Compound (vs All)
Research Demand Index73.69 (24.57)
Research Supply Index7.97 (2.92)
Research Growth Index4.97 (4.65)
Search Engine Demand Index132.13 (26.88)
Search Engine Supply Index2.00 (0.95)

This Compound (73.69)

All Compounds (24.57)

Study Types

Publication TypeThis drug (%)All Drugs (%)
Trials10 (0.35%)5.53%
Reviews12 (0.42%)6.00%
Case Studies2 (0.07%)4.05%
Observational2 (0.07%)0.25%
Other2,851 (99.10%)84.16%
[information is prepared from research data collected from National Library of Medicine (NLM), extracted Dec-2023]