Page last updated: 2024-11-04

indole

Description Research Excerpts Clinical Trials Roles Classes Pathways Study Profile Bioassays Related Drugs Related Conditions Protein Interactions Research Growth Market Indicators

Cross-References

ID SourceID
PubMed CID798
CHEMBL ID15844
CHEBI ID16881
SCHEMBL ID698
SCHEMBL ID1921769
SCHEMBL ID940818
SCHEMBL ID9559244
MeSH IDM0096122

Synonyms (101)

Synonym
BIDD:GT0304
wln: t56 bmj
nsc-1964
ketole
nsc1964
1h-indole
benzopyrrole
indol
1-benzazole
1-azaindene
CHEBI:16881 ,
einecs 204-420-7
1-benzo(b)pyrrole
indole (natural)
nsc 1964
ai3-01540
indol [german]
IND ,
indole benzo-pyrrole
inchi=1/c8h7n/c1-2-4-8-7(3-1)5-6-9-8/h1-6,9
ccris 4421
epa pesticide chemical code 025000
2,3-benzopyrole
benzo[b]pyrrole
indole (8ci)
fema no. 2593
1h-indole (9ci)
hsdb 599
caswell no. 498b
120-72-9
indole ,
C00463
2,3-benzopyrrole
indole, >=99%, fg
indole, >=99%
indole, analytical standard
DB04532
indole, 98%
NCGC00167539-01
indole (white flake)
I-0810
I-0800
bdbm50094702
indole, 7
BMSE000097
CHEMBL15844 ,
I0021
AKOS000119629
NCGC00167539-02
NCGC00256348-01
tox21_302937
dtxsid0020737 ,
dtxcid40737
cas-120-72-9
tox21_112536
NCGC00259226-01
tox21_201677
STL163380
BBL011739
8724fjw4m5 ,
unii-8724fjw4m5
BP-10563
FT-0627211
indolum [hpus]
indole [usp-rs]
indole [mi]
indole [hsdb]
indole [fcc]
indole [fhfi]
indolum
185L
S6358
SCHEMBL698
NCGC00167539-03
tox21_112536_1
CG-0501
SCHEMBL1921769
1-h-indole
benzazole
SCHEMBL940818
SCHEMBL9559244
STR01201
1h-benzo[b]pyrrole
mfcd00005607
F2190-0647
CS-W001132
SR-01000944736-1
sr-01000944736
indole, puriss., >=98.5% (gc)
Z57833933
Q319541
HY-W001132
indole 100 microg/ml in acetonitrile
BCP27232
AMY3411
mono-indole
AT36838
82451-55-6
EN300-18285
indole, 3-benzopyrrole, 1-benzazole
indole (usp-rs)

Research Excerpts

Overview

Indole signaling is an important cross-species communication pathway in the mammalian gut. Indole is a typical nitrogen-containing aromatic pollutant in coking wastewater. It can be used for the microbial production of indigo.

ExcerptReferenceRelevance
"Indole signaling is an important cross-species communication pathway in the mammalian gut. "( Dynamics of transcription-translation coordination tune bacterial indole signaling.
Ji, H; Wang, T; Wang, TL; Xing, XH; Zhang, C; Zheng, X, 2020
)
2.24
"Indole is a microbiota metabolite that exerts anti-inflammatory responses. "( Indole Alleviates Diet-Induced Hepatic Steatosis and Inflammation in a Manner Involving Myeloid Cell 6-Phosphofructo-2-Kinase/Fructose-2,6-Biphosphatase 3.
Alpini, G; Athrey, G; Botchlett, R; Chen, L; Francis, H; Glaser, S; Hu, J; Li, H; Li, Q; Ma, L; Matthews, D; Meng, F; Threadgill, DW; Wu, C; Xiao, X; Zeng, T; Zheng, J; Zhou, J, 2020
)
3.44
"Indole is an intercellular signaling molecule that is produced by oral bacteria other than S."( Biofilm Formation by Streptococcus mutans is Enhanced by Indole via the Quorum Sensing Pathway.
Habe, H; Inaba, T; Nomura, N; Obana, N, 2020
)
1.52
"Indole is a molecule of considerable biochemical significance, acting as both an interspecies signal molecule and a building block of biological elements. "( Indole Biodegradation in Acinetobacter sp. Strain O153: Genetic and Biochemical Characterization.
Gasparavičiūtė, R; Meškys, R; Sadauskas, M; Vaitekūnas, J, 2017
)
3.34
"Indole is a signaling molecule that increases the antibiotic resistance of bacteria, at least in part, through activation of efflux pumps."( Characterization and regulation of AcrABR, a RND-type multidrug efflux system, in Agrobacterium tumefaciens C58.
Dokpikul, T; Khemthong, S; Mongkolsuk, S; Nuonming, P; Sukchawalit, R, 2018
)
1.2
"Indole is a typical nitrogen-containing aromatic pollutant in coking wastewater, and it can be used for the microbial production of indigo, one of the oldest dyestuffs. "( Performance and Microbial Community Analysis of Bioaugmented Activated Sludge System for Indigo Production from Indole.
Dai, C; Li, S; Lian, S; Ma, Q; Qu, Y; Zhang, X; Zhou, J, 2019
)
2.17
"Indole is a degradation product of tryptophan that functions as a signaling molecule in many bacteria. "( Indole Inhibits ToxR Regulon Expression in
Bina, JE; Bina, XR; Howard, MF, 2019
)
3.4
"Indole is an aromatic molecule with diverse signalling roles."( Indole Pulse Signalling Regulates the Cytoplasmic pH of E. coli in a Memory-Like Manner.
Al Nahas, K; Cama, J; Caño-Muñiz, S; Keyser, UF; Summers, DK; Zarkan, A; Zhu, J, 2019
)
2.68
"Indole is a versatile pharmacophore, a privileged scaffold and an outstanding heterocyclic compound with wide ranges of pharmacological activities due to different mechanisms of action. "( Medicinal chemistry of indole derivatives: Current to future therapeutic prospectives.
Kumari, A; Singh, RK, 2019
)
2.27
"Indole is a universal signal that regulates various bacterial behaviors, such as biofilm formation and antibiotic resistance. "( Highly active modulators of indole signaling alter pathogenic behaviors in Gram-negative and Gram-positive bacteria.
Eguren, K; Melander, C; Minvielle, MJ, 2013
)
2.13
"Indole is an organic compound that is widespread in microbial communities inhabiting diverse habitats, like the soil environment and human intestines. "( Indole: a signaling molecule or a mere metabolic byproduct that alters bacterial physiology at a high concentration?
Kim, J; Park, W, 2015
)
3.3
"Indole is a characteristic volatile constituent in oolong tea. "( Formation of Volatile Tea Constituent Indole During the Oolong Tea Manufacturing Process.
Dong, F; Du, B; Fu, X; Gui, J; Mei, X; Watanabe, N; Yang, Z; Ye, T; Zeng, L; Zhen, Y; Zhou, Y, 2016
)
2.15
"The indole ring system is an essential part of several tubulin inhibitors identified in the recent years."( Indole molecules as inhibitors of tubulin polymerization: potential new anticancer agents, an update (2013-2015).
Beaman, KD; Patil, R; Patil, SA, 2016
)
2.36
"As indole nucleus is a central component of many natural and synthetic molecules with extensive biological activity, this review incorporates a variety of such hybrid compounds with indole moiety as one of the active units, where better therapeutic effect has been successfully achieved, by either simultaneous or sequential action of individual functional pharmacore."( Multi-Target Directed Indole Based Hybrid Molecules in Cancer Therapy : An Up-To-Date Evidence-Based Review.
Kamath, PR; Sunil, D, 2017
)
1.28
"Indole is an important signal molecule in intra- or interspecies relationships, regulating a variety of bacterial behaviours such as cell aggregation and stress resistance; however, the regulatory mechanism remains an ongoing area of investigation."( Poly(A) polymerase I participates in the indole regulatory pathway of Pantoea agglomerans YS19.
Feng, Y; Jiang, J; Li, Z; Shen, D; Wu, C; Yu, X, 2017
)
1.44
"Indole is an intercellular and interkingdom signalling molecule found in diverse ecological niches. "( Indole-associated predator-prey interactions between the nematode Caenorhabditis elegans and bacteria.
Choi, H; Kim, E; Kim, M; Kim, Y; Kim, YG; Lee, J; Lee, JH, 2017
)
3.34
"Indole is a bacterial signalling molecule that blocks E. "( Indole prevents Escherichia coli cell division by modulating membrane potential.
Chimerel, C; Field, CM; Keyser, UF; Piñero-Fernandez, S; Summers, DK, 2012
)
3.26
"Indole is a signalling molecule, produced by a number of Gram-positive and Gram-negative bacteria both in nature as well as clinical environments. "( The bacterial signalling molecule indole attenuates the virulence of the fungal pathogen Candida albicans.
Go, GW; Kim, Y; Mylonakis, E; Oh, S, 2012
)
2.1
"Indole is an important biological signalling molecule produced by many Gram positive and Gram negative bacterial species, including Escherichia coli. "( The effect of bacterial signal indole on the electrical properties of lipid membranes.
Chimerel, C; Keyser, UF; Murray, AJ; Oldewurtel, ER; Summers, DK, 2013
)
2.12
"Indole is an interspecies signal that decreases E. "( Indole is an inter-species biofilm signal mediated by SdiA.
Jayaraman, A; Lee, J; Wood, TK, 2007
)
3.23
"Indole-diterpenes are a structurally diverse group of secondary metabolites with a common cyclic diterpene backbone derived from geranylgeranyl diphosphate and an indole group derived from indole-3-glycerol phosphate. "( The genetic basis for indole-diterpene chemical diversity in filamentous fungi.
Nicholson, MJ; Parker, EJ; Saikia, S; Scott, B; Young, C, 2008
)
2.1

Effects

Indole has received considerable attention because of its remarkable effects on various biological functions of the microbial communities. Indole has been proposed to act as an extracellular signal molecule influencing biofilm formation in a range of bacteria.

ExcerptReferenceRelevance
"Indole signalling has been proposed as a potential target for the development of novel virulence inhibitors to control bacterial infections. "( Indole analogues decreasing the virulence of Vibrio campbellii towards brine shrimp larvae.
Defoirdt, T; Yang, Q; Zhang, S, 2022
)
3.61
"Indole derivatives have been the focus of many researchers in the study of pharmaceutical compounds for many years. "( Synthetic strategies, SAR studies, and computer modeling of indole 2 and 3-carboxamides as the strong enzyme inhibitors: a review.
Bahmani, A; Chehardoli, G, 2021
)
2.31
"Indole and skatole have been associated with the detection of oviposition sites and animal hosts."( The evolutionarily conserved indolergic receptors of the non-hematophagous elephant mosquito Toxorhynchites amboinensis.
Bohbot, JD; Dekel, A; Yakir, E, 2019
)
1.53
"Indole has indiscriminate irritating effect on the respiratory tract: Limir is at Limac (77,8 mg/m3)."( [Toxicological characteristic of indole as a basis for its hygienic regulation].
Gorokhova, LG; Martynova, NA,
)
1.13
"Indole has diverse signalling roles, including modulation of biofilm formation, virulence and stress responses. "( The indole pulse: a new perspective on indole signalling in Escherichia coli.
Cama, J; Gaimster, H; Hernández-Ainsa, S; Keyser, UF; Summers, DK, 2014
)
2.4
"Indole has received considerable attention because of its remarkable effects on various biological functions of the microbial communities, for example, biofilm formation, motility, virulence, plasmid stability, and antibiotic resistance."( Indole: a signaling molecule or a mere metabolic byproduct that alters bacterial physiology at a high concentration?
Kim, J; Park, W, 2015
)
2.58
"Indole has been used as a tractable model to study the hydration structures of biomolecules as well as the interplay of non-covalent interactions within ion-biomolecule-water complexes, which largely determine their structure and dynamics."( Influence of hydration on ion-biomolecule interactions: M(+)(indole)(H2O)(n) (M = Na, K; n = 3-6).
Ke, H; Lisy, JM, 2015
)
1.38
"Indole has been proposed to act as an extracellular signal molecule influencing biofilm formation in a range of bacteria. "( Indole acts as an extracellular cue regulating gene expression in Vibrio cholerae.
Bartlett, DH; Beyhan, S; Mueller, RS; Saini, SG; Yildiz, FH, 2009
)
3.24
"Indole has many, diverse roles in bacterial signaling. "( Indole transport across Escherichia coli membranes.
Chimerel, C; Keyser, UF; Piñero-Fernandez, S; Summers, DK, 2011
)
3.25
"Indole has recently been implicated in cell-cell signaling and biofilm repression through a putative interaction with the LuxR homologue SdiA."( Characterization of the induction and cellular role of the BaeSR two-component envelope stress response of Escherichia coli.
Leblanc, SK; Oates, CW; Raivio, TL, 2011
)
1.09
"Five indole compounds have been isolated from bovine pineal tissue and characterized as 5-methoxytryptophol, N-acetyl-5-methoxytryptamine (melatonin), 5-hydroxytryptophol, 5-methoxyindole-3-acetic acid, and 5-hydroxyindole-3-acetic acid. "( INDOLE COMPOUNDS: ISOLATION FROM PINEAL TISSUE.
FARRELL, G; MCISAAC, WM; TABORSKY, RG; TAYLOR, AN, 1965
)
2.2

Actions

Indole signaling plays an important role in bacterial pathogenesis. Indole at lower doses increased PBP and PBF.

ExcerptReferenceRelevance
"Indole signaling plays an important role in bacterial pathogenesis. "( Indole decreases the virulence of the bivalve model pathogens Vibrio tasmaniensis LGP32 and Vibrio crassostreae J2-9.
Defoirdt, T; Eggermont, M; Fu, S; Janssen, CR; Yang, Q; Zhang, S, 2022
)
3.61
"Indole at lower doses increased PBP and PBF."( Colonic indole, gut bacteria metabolite of tryptophan, increases portal blood pressure in rats.
Huc, T; Konop, M; Onyszkiewicz, M; Podsadni, P; Szczepańska, A; Turło, J; Ufnal, M, 2018
)
1.64
"Indole level was lower (P<0.05) in the adipose tissue of T30 than C pigs with intermediate levels in T15."( Hydrolysable tannin-based diet rich in gallotannins has a minimal impact on pig performance but significantly reduces salivary and bulbourethral gland size.
Ampuero-Kragten, S; Bee, G; Čandek-Potokar, M; Litten-Brown, J; Mueller-Harvey, I; Salminen, JP; Silacci, P; Wealleans, AL, 2017
)
1.18

Treatment

ExcerptReferenceRelevance
"Azaindole-1 treatment resulted in a decreased immunoreactivity for phospho-myosin phosphatase target subunit 1 and proliferating cell nuclear antigen in pulmonary vessels of MCT-injected rats, suggesting an impaired ROCK activity and reduced proliferating cells."( Therapeutic efficacy of azaindole-1 in experimental pulmonary hypertension.
Dahal, BK; Ghofrani, HA; Grimminger, F; Kast, R; Kosanovic, D; Lai, YJ; Pamarthi, PK; Schermuly, RT; Schirok, H; Seeger, W; Stasch, JP; Sydykov, A; Weissmann, N, 2010
)
1.17

Toxicity

ExcerptReferenceRelevance
"Many nitrogen-heterocyclic compounds (NHCs) are toxic and recalcitrant contaminants that need to be degraded by advanced oxidation processes."( Toxicity change patterns and its mechanism during the degradation of nitrogen-heterocyclic compounds by O(3)/UV.
Huang, X; Wang, XM, 2007
)
0.34
" It represents a practical and safe cyanation method."( The palladium-catalyzed cyanation of indole C-H bonds with the combination of NH4HCO3 and DMSO as a safe cyanide source.
Chen, F; Chen, J; Cheng, J; Ren, X, 2011
)
0.64
"High concentrations of indole are known to be toxic to cells due to perturbations in membrane potential."( Indole toxicity involves the inhibition of adenosine triphosphate production and protein folding in Pseudomonas putida.
Heo, A; Hong, H; Kim, J; Park, W, 2013
)
2.14

Compound-Compound Interactions

ExcerptReferenceRelevance
" Since tetrahydro-β-carbolines and β-carbolines target receptors, ion channels and neuronal membranes which are common to anesthetic agents, we propose a hypothesis that they may pharmacodynamically interact at GABAA receptors, NMDA receptors, voltage-gated Na(+) channels and membrane lipid bilayers to attenuate anesthetics-induced positive allosteric GABAA receptor modulation, NMDA receptor antagonism, ion channel blockade and neuronal membrane modification, thereby affecting anesthetic efficacy."( Anesthetic effects changeable in habitual drinkers: Mechanistic drug interactions with neuro-active indoleamine-aldehyde condensation products associated with alcoholic beverage consumption.
Tsuchiya, H, 2016
)
0.65

Bioavailability

Hydrophobic substitution such as isopropyl at 1-position of the indole moiety without any substitution at 2-position has an essential role for enhancing bioavailability. The hexahydropyridoindole scaffold represents a valuable lead with a great deal of knowledge on molecular mechanisms of free radical scavenging, on bioavailability and toxicity.

ExcerptReferenceRelevance
" Agonistic 5-HT(1A) receptor activity was confirmed in vivo in the ultrasonic vocalization test, and the results suggest that the introduction of the carboxamide residue leads to better bioavailability than the corresponding methyl ether."( Indolebutylamines as selective 5-HT(1A) agonists.
Bartoszyk, GD; Böttcher, H; Greiner, HE; Heinrich, T; Seyfried, CA; Van Amsterdam, C, 2004
)
1.77
" Compound 49 also displayed excellent selectivity over a wide panel of MMPs as well as excellent oral bioavailability (F%>90%) in rat n-in-1 PK studies."( Potent, selective, orally bioavailable inhibitors of tumor necrosis factor-alpha converting enzyme (TACE): discovery of indole, benzofuran, imidazopyridine and pyrazolopyridine P1' substituents.
Anand, R; Christ, DD; Covington, MB; Duan, JJ; Liu, RQ; Lu, Z; Newton, RC; Ott, GR; Qian, M; Trzaskos, J; Vaddi, K, 2008
)
0.55
" Compound 18c demonstrates in vivo CB1 antagonist efficacy (CB1 agonist induced hypothermia model) and is orally bioavailable in rat."( Identification and hit-to-lead optimization of a novel class of CB1 antagonists.
Baker, J; Cowley, P; Edwards, D; Ho, KK; Jokiel, P; Letourneau, JJ; McAleer, L; Ohlmeyer, MH; Olson, J; Riviello, CM; Swanson, RN; Ward, N; Webb, ML; Yang, J, 2010
)
0.36
" Pharmacokinetic data in dog for representative compounds demonstrated moderate oral bioavailability and reasonable half-lives."( Azaindole N-methyl hydroxamic acids as HIV-1 integrase inhibitors-II. The impact of physicochemical properties on ADME and PK.
Butler, SL; Dalvie, D; DeLisle, D; Dress, KR; Hu, Q; Huang, B; Johnson, TW; Kuehler, JE; Kuki, A; Liu, W; Peng, Q; Plewe, MB; Smith, GL; Solowiej, J; Tanis, SP; Tran, KT; Wang, H; Yang, A; Yin, C; Yu, X; Zhang, J; Zhu, H, 2010
)
0.98
" The hexahydropyridoindole scaffold represents a valuable lead with a great deal of knowledge on molecular mechanisms of free radical scavenging, on bioavailability and toxicity."( Substituted pyridoindoles as biological antioxidants: drug design, chemical synthesis, and biological activity.
Kovacikova, L; Majekova, M; Stefek, M, 2015
)
1.07
" Hydrophobic substitution such as isopropyl at 1-position of the indole moiety without any substitution at 2-position has an essential role for enhancing bioavailability and therefore for high in vivo efficacy."( Design and synthesis of novel 2-(indol-5-yl)thiazole derivatives as xanthine oxidase inhibitors.
Choi, SP; Jung, CK; Jung, SH; Kim, GT; Kim, TH; Lee, JY; Song, JU, 2015
)
0.65
" In this review, we discuss the possible influence of carbohydrates, polyphenols, lipids and proteins colonic fermentation on production, bioavailability and biological activity of metabolites linked to the gut-microbiota-brain axis."( Current evidence linking diet to gut microbiota and brain development and function.
Ceppa, F; Mancini, A; Tuohy, K, 2019
)
0.51
"The ATP-binding cassette transporter P-glycoprotein (P-gp) is known to limit both brain penetration and oral bioavailability of many chemotherapy drugs."( A High-Throughput Screen of a Library of Therapeutics Identifies Cytotoxic Substrates of P-glycoprotein.
Ambudkar, SV; Brimacombe, KR; Chen, L; Gottesman, MM; Guha, R; Hall, MD; Klumpp-Thomas, C; Lee, OW; Lee, TD; Lusvarghi, S; Robey, RW; Shen, M; Tebase, BG, 2019
)
0.51

Dosage Studied

The metabolic pathways of EPT shifted from in vitro hydroxylation of the alkyl amine group to an increased in vivo hydroxilation of the indole ring with several N-dealkyl metabolites. The compounds 3-methylindole and indole-3-acetic acid were chosen as representative of indole derivatives.

ExcerptRelevanceReference
" Erythrocyte fragility appeared to increase in both groups at 8 hours after dosing and peaked at 16 hours after dosing."( Acute hemolytic anemia induced by oral administration of indole in ponies.
Bayly, WM; Breeze, RG; Counts, DF; Laegreid, WW; Paradis, MR, 1991
)
0.53
" Steer 1 was dosed twice resulting in a total of 45 absorption measurements."( Net absorption of 3-methylindole and indole in cattle after oral administration of L-tryptophan.
Breeze, RG; Hammond, AC; Huntington, GB, 1983
)
0.57
" The compounds 3-methylindole and indole-3-acetic acid were chosen as representative of indole derivatives in a dose-response study using purified MPO."( Indole ring oxidation by activated leukocytes prevents the production of hypochlorous acid.
Brunetti, IL; Faria-Oliveira, OM; Fonseca, LM; Paino, IM; Ximenes, VF, 2005
)
2.08
"080 μM), and afforded tumor regression when dosed (200 mpk SC BID) in an EZH2 dependent tumor xenograft model."( Discovery, design, and synthesis of indole-based EZH2 inhibitors.
Albrecht, BK; Audia, JE; Balasubramanian, S; Campbell, R; Cook, AS; Cummings, RT; Dakin, LA; Duplessis, M; Gagnon, A; Gehling, VS; Good, AC; Harmange, JC; Iyer, P; Lee, C; Nasveschuk, CG; Normant, E; Trojer, P; Vaswani, RG; Zhao, F, 2015
)
0.69
" Subsequently, we screened their cytotoxicity via CCK-8 assay in HepG2 cells, a human hepatoma cell line and chose compound 4p that showed the lowest dosage of IC50 to study the antitumor activities to HCC."( Oral administration of indole substituted dipyrido[2,3-d]pyrimidine derivative exhibits anti-tumor activity via inhibiting AKT and ERK1/2 on hepatocellular carcinoma.
Cen, L; Gao, X; Li, F; Wen, R; Yan, H; Yao, H; Zhu, S, 2018
)
0.79
"Hormesis is a dose-response relationship phenomenon characterized by low-dose stimulation and high-dose inhibition."( Multiple-species hormetic phenomena induced by indole: A case study on the toxicity of indole to bacteria, algae and human cells.
Gong, R; Huang, S; Lin, Z; Pan, Y; Song, J; Sun, H; Zheng, M, 2019
)
0.77
" Investigations using rat urine after oral dosing showed that the metabolic pathways of EPT shifted from in vitro hydroxylation of the alkyl amine group to an increased in vivo hydroxylation of the indole ring with several N-dealkyl metabolites."( Studies on the In Vitro and In Vivo Metabolic Fate of the New Psychoactive Substance N-Ethyl-N-Propyltryptamine for Analytical Purposes.
Eckstein, N; Felske, C; Manier, SK; Meyer, MR; Zapp, J, 2021
)
0.81
[information is derived through text-mining from research data collected from National Library of Medicine (NLM), extracted Dec-2023]

Roles (1)

RoleDescription
Escherichia coli metaboliteAny bacterial metabolite produced during a metabolic reaction in Escherichia coli.
[role information is derived from Chemical Entities of Biological Interest (ChEBI), Hastings J, Owen G, Dekker A, Ennis M, Kale N, Muthukrishnan V, Turner S, Swainston N, Mendes P, Steinbeck C. (2016). ChEBI in 2016: Improved services and an expanding collection of metabolites. Nucleic Acids Res]

Drug Classes (2)

ClassDescription
indoleEither of two isomeric forms comprising a benzene ring fused to a pyrrole ring.
polycyclic heteroarene
[compound class information is derived from Chemical Entities of Biological Interest (ChEBI), Hastings J, Owen G, Dekker A, Ennis M, Kale N, Muthukrishnan V, Turner S, Swainston N, Mendes P, Steinbeck C. (2016). ChEBI in 2016: Improved services and an expanding collection of metabolites. Nucleic Acids Res]

Pathways (23)

PathwayProteinsCompounds
Metabolism14961108
Biological oxidations150276
Phase I - Functionalization of compounds69175
Cytochrome P450 - arranged by substrate type30110
Miscellaneous substrates315
Tryptophan Metabolism II623
superpathway of phenylalanine, tyrosine and tryptophan biosynthesis2925
DIBOA-glucoside biosynthesis713
indigo biosynthesis08
indole degradation to anthranil and anthranilate012
superpathway of benzoxazinoid glucosides biosynthesis920
indican biosynthesis010
L-tryptophan biosynthesis1317
L-tryptophan degradation II (via pyruvate)211
superpathway of benzoxazinoid glucosides biosynthesis1020
indican biosynthesis011
indigo biosynthesis09
DIBOA-glucoside biosynthesis813
indole degradation to anthranil and anthranilate015
L-tryptophan biosynthesis2027
superpathway of aromatic amino acid biosynthesis2184
superpathway of chorismate metabolism56186
superpathway of L-tryptophan biosynthesis1665
superpathway of phenylalanine, tyrosine and tryptophan biosynthesis1336
tryptophan biosynthesis517
IAA biosynthesis I025
superpathway of phenylalanine, tyrosine, and tryptophan biosynthesis038
superpathway of tryptophan biosynthesis030
tryptophan degradation II (via pyruvate)08
superpathway of chorismate576
Tryptophan biosynthesis216
IAA biosynthesis I021

Protein Targets (37)

Potency Measurements

ProteinTaxonomyMeasurementAverage (µ)Min (ref.)Avg (ref.)Max (ref.)Bioassay(s)
hypoxia-inducible factor 1 alpha subunitHomo sapiens (human)Potency5.40623.189029.884159.4836AID1224846
RAR-related orphan receptor gammaMus musculus (house mouse)Potency3.85820.006038.004119,952.5996AID1159521; AID1159523
SMAD family member 2Homo sapiens (human)Potency19.18180.173734.304761.8120AID1346924
SMAD family member 3Homo sapiens (human)Potency19.18180.173734.304761.8120AID1346924
GLI family zinc finger 3Homo sapiens (human)Potency6.01370.000714.592883.7951AID1259369
AR proteinHomo sapiens (human)Potency14.85000.000221.22318,912.5098AID1259243
estrogen receptor 2 (ER beta)Homo sapiens (human)Potency40.22990.000657.913322,387.1992AID1259377; AID1259378
nuclear receptor subfamily 1, group I, member 3Homo sapiens (human)Potency12.19610.001022.650876.6163AID1224838; AID1224839; AID1224893
progesterone receptorHomo sapiens (human)Potency6.74750.000417.946075.1148AID1346795
cytochrome P450 family 3 subfamily A polypeptide 4Homo sapiens (human)Potency33.78580.01237.983543.2770AID1645841
glucocorticoid receptor [Homo sapiens]Homo sapiens (human)Potency2.68320.000214.376460.0339AID720692
retinoic acid nuclear receptor alpha variant 1Homo sapiens (human)Potency39.77460.003041.611522,387.1992AID1159552; AID1159553; AID1159555
retinoid X nuclear receptor alphaHomo sapiens (human)Potency7.49670.000817.505159.3239AID1159527; AID1159531
estrogen-related nuclear receptor alphaHomo sapiens (human)Potency2.34110.001530.607315,848.9004AID1224841; AID1224842; AID1224848; AID1224849; AID1259401
pregnane X nuclear receptorHomo sapiens (human)Potency15.10580.005428.02631,258.9301AID1346982
estrogen nuclear receptor alphaHomo sapiens (human)Potency30.14000.000229.305416,493.5996AID1259244
aryl hydrocarbon receptorHomo sapiens (human)Potency26.97440.000723.06741,258.9301AID743085; AID743122
thyrotropin-releasing hormone receptorHomo sapiens (human)Potency38.27440.154917.870243.6557AID1346891
v-jun sarcoma virus 17 oncogene homolog (avian)Homo sapiens (human)Potency2.41480.057821.109761.2679AID1159526
Histone H2A.xCricetulus griseus (Chinese hamster)Potency99.12140.039147.5451146.8240AID1224845
potassium voltage-gated channel subfamily H member 2 isoform dHomo sapiens (human)Potency25.11890.01789.637444.6684AID588834
thyroid hormone receptor beta isoform 2Rattus norvegicus (Norway rat)Potency20.12170.000323.4451159.6830AID743065; AID743067
Voltage-dependent calcium channel gamma-2 subunitMus musculus (house mouse)Potency30.14000.001557.789015,848.9004AID1259244
Glutamate receptor 2Rattus norvegicus (Norway rat)Potency30.14000.001551.739315,848.9004AID1259244
[prepared from compound, protein, and bioassay information from National Library of Medicine (NLM), extracted Dec-2023]

Inhibition Measurements

ProteinTaxonomyMeasurementAverageMin (ref.)Avg (ref.)Max (ref.)Bioassay(s)
Carbonic anhydrase 1Homo sapiens (human)Ki27.40000.00001.372610.0000AID644084
Carbonic anhydrase 2Homo sapiens (human)Ki32.50000.00000.72369.9200AID644085
Carbonic anhydrase 4Homo sapiens (human)Ki2.33000.00021.97209.9200AID644086
Carbonic anhydrase 6Homo sapiens (human)Ki3.63000.00011.47109.9200AID644087
Carbonic anhydrase 3Bos taurus (cattle)Ki17.60000.11303.88159.7100AID644088
[prepared from compound, protein, and bioassay information from National Library of Medicine (NLM), extracted Dec-2023]

Activation Measurements

ProteinTaxonomyMeasurementAverageMin (ref.)Avg (ref.)Max (ref.)Bioassay(s)
Transient receptor potential cation channel subfamily A member 1Homo sapiens (human)EC50 (µMol)75.20000.00033.166210.0000AID1682372
EndolysinTequatrovirus T4Kd290.00003.00003.00003.0000AID238119
Integrin beta-2Homo sapiens (human)Kd300.00000.02000.02000.0200AID99593; AID99595
Intercellular adhesion molecule 1Homo sapiens (human)Kd300.00000.02000.02000.0200AID99593; AID99595
Integrin alpha-LHomo sapiens (human)Kd300.00000.02000.02000.0200AID99593; AID99595
Adenosine kinaseHomo sapiens (human)Kd3,000.00000.01301.83683.4930AID220591; AID34005
[prepared from compound, protein, and bioassay information from National Library of Medicine (NLM), extracted Dec-2023]

Biological Processes (91)

Processvia Protein(s)Taxonomy
monoatomic ion transportTransient receptor potential cation channel subfamily A member 1Homo sapiens (human)
intracellular calcium ion homeostasisTransient receptor potential cation channel subfamily A member 1Homo sapiens (human)
cell surface receptor signaling pathwayTransient receptor potential cation channel subfamily A member 1Homo sapiens (human)
response to coldTransient receptor potential cation channel subfamily A member 1Homo sapiens (human)
response to xenobiotic stimulusTransient receptor potential cation channel subfamily A member 1Homo sapiens (human)
response to organic substanceTransient receptor potential cation channel subfamily A member 1Homo sapiens (human)
response to organic cyclic compoundTransient receptor potential cation channel subfamily A member 1Homo sapiens (human)
sensory perception of painTransient receptor potential cation channel subfamily A member 1Homo sapiens (human)
calcium-mediated signalingTransient receptor potential cation channel subfamily A member 1Homo sapiens (human)
response to painTransient receptor potential cation channel subfamily A member 1Homo sapiens (human)
thermoceptionTransient receptor potential cation channel subfamily A member 1Homo sapiens (human)
detection of mechanical stimulus involved in sensory perception of painTransient receptor potential cation channel subfamily A member 1Homo sapiens (human)
detection of chemical stimulus involved in sensory perception of painTransient receptor potential cation channel subfamily A member 1Homo sapiens (human)
protein homotetramerizationTransient receptor potential cation channel subfamily A member 1Homo sapiens (human)
cellular response to hydrogen peroxideTransient receptor potential cation channel subfamily A member 1Homo sapiens (human)
calcium ion transmembrane transportTransient receptor potential cation channel subfamily A member 1Homo sapiens (human)
cellular response to organic substanceTransient receptor potential cation channel subfamily A member 1Homo sapiens (human)
one-carbon metabolic processCarbonic anhydrase 1Homo sapiens (human)
morphogenesis of an epitheliumCarbonic anhydrase 2Homo sapiens (human)
positive regulation of synaptic transmission, GABAergicCarbonic anhydrase 2Homo sapiens (human)
positive regulation of cellular pH reductionCarbonic anhydrase 2Homo sapiens (human)
angiotensin-activated signaling pathwayCarbonic anhydrase 2Homo sapiens (human)
regulation of monoatomic anion transportCarbonic anhydrase 2Homo sapiens (human)
secretionCarbonic anhydrase 2Homo sapiens (human)
regulation of intracellular pHCarbonic anhydrase 2Homo sapiens (human)
neuron cellular homeostasisCarbonic anhydrase 2Homo sapiens (human)
positive regulation of dipeptide transmembrane transportCarbonic anhydrase 2Homo sapiens (human)
regulation of chloride transportCarbonic anhydrase 2Homo sapiens (human)
carbon dioxide transportCarbonic anhydrase 2Homo sapiens (human)
one-carbon metabolic processCarbonic anhydrase 2Homo sapiens (human)
microglial cell activationIntegrin beta-2Homo sapiens (human)
receptor-mediated endocytosisIntegrin beta-2Homo sapiens (human)
phagocytosis, engulfmentIntegrin beta-2Homo sapiens (human)
apoptotic processIntegrin beta-2Homo sapiens (human)
inflammatory responseIntegrin beta-2Homo sapiens (human)
cell adhesionIntegrin beta-2Homo sapiens (human)
leukocyte cell-cell adhesionIntegrin beta-2Homo sapiens (human)
cell-matrix adhesionIntegrin beta-2Homo sapiens (human)
integrin-mediated signaling pathwayIntegrin beta-2Homo sapiens (human)
cell-cell signalingIntegrin beta-2Homo sapiens (human)
regulation of cell shapeIntegrin beta-2Homo sapiens (human)
neutrophil chemotaxisIntegrin beta-2Homo sapiens (human)
receptor internalizationIntegrin beta-2Homo sapiens (human)
positive regulation of superoxide anion generationIntegrin beta-2Homo sapiens (human)
heterotypic cell-cell adhesionIntegrin beta-2Homo sapiens (human)
endodermal cell differentiationIntegrin beta-2Homo sapiens (human)
receptor clusteringIntegrin beta-2Homo sapiens (human)
positive regulation of neutrophil degranulationIntegrin beta-2Homo sapiens (human)
negative regulation of dopamine metabolic processIntegrin beta-2Homo sapiens (human)
regulation of peptidyl-tyrosine phosphorylationIntegrin beta-2Homo sapiens (human)
cellular response to low-density lipoprotein particle stimulusIntegrin beta-2Homo sapiens (human)
positive regulation of protein targeting to membraneIntegrin beta-2Homo sapiens (human)
amyloid-beta clearanceIntegrin beta-2Homo sapiens (human)
cell-cell adhesionIntegrin beta-2Homo sapiens (human)
cell-cell adhesion via plasma-membrane adhesion moleculesIntegrin beta-2Homo sapiens (human)
positive regulation of leukocyte adhesion to vascular endothelial cellIntegrin beta-2Homo sapiens (human)
neutrophil migrationIntegrin beta-2Homo sapiens (human)
positive regulation of prostaglandin-E synthase activityIntegrin beta-2Homo sapiens (human)
cell adhesion mediated by integrinIntegrin beta-2Homo sapiens (human)
regulation of leukocyte mediated cytotoxicityIntercellular adhesion molecule 1Homo sapiens (human)
T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cellIntercellular adhesion molecule 1Homo sapiens (human)
T cell antigen processing and presentationIntercellular adhesion molecule 1Homo sapiens (human)
positive regulation of cellular extravasationIntercellular adhesion molecule 1Homo sapiens (human)
cell adhesionIntercellular adhesion molecule 1Homo sapiens (human)
heterophilic cell-cell adhesion via plasma membrane cell adhesion moleculesIntercellular adhesion molecule 1Homo sapiens (human)
leukocyte cell-cell adhesionIntercellular adhesion molecule 1Homo sapiens (human)
membrane to membrane dockingIntercellular adhesion molecule 1Homo sapiens (human)
cell adhesion mediated by integrinIntercellular adhesion molecule 1Homo sapiens (human)
adhesion of symbiont to hostIntercellular adhesion molecule 1Homo sapiens (human)
symbiont entry into host cellIntercellular adhesion molecule 1Homo sapiens (human)
receptor-mediated virion attachment to host cellIntercellular adhesion molecule 1Homo sapiens (human)
leukocyte migrationIntercellular adhesion molecule 1Homo sapiens (human)
establishment of endothelial barrierIntercellular adhesion molecule 1Homo sapiens (human)
positive regulation of ERK1 and ERK2 cascadeIntercellular adhesion molecule 1Homo sapiens (human)
cellular response to glucose stimulusIntercellular adhesion molecule 1Homo sapiens (human)
T cell extravasationIntercellular adhesion molecule 1Homo sapiens (human)
regulation of ruffle assemblyIntercellular adhesion molecule 1Homo sapiens (human)
negative regulation of extrinsic apoptotic signaling pathway via death domain receptorsIntercellular adhesion molecule 1Homo sapiens (human)
cellular response to amyloid-betaIntercellular adhesion molecule 1Homo sapiens (human)
cellular response to leukemia inhibitory factorIntercellular adhesion molecule 1Homo sapiens (human)
negative regulation of endothelial cell apoptotic processIntercellular adhesion molecule 1Homo sapiens (human)
regulation of DNA-templated transcriptionTrp operon repressorEscherichia coli K-12
regulation of DNA-templated transcriptionTrp operon repressorEscherichia coli K-12
negative regulation of DNA-templated transcriptionTrp operon repressorEscherichia coli K-12
T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cellIntegrin alpha-LHomo sapiens (human)
phagocytosisIntegrin alpha-LHomo sapiens (human)
inflammatory responseIntegrin alpha-LHomo sapiens (human)
cell adhesionIntegrin alpha-LHomo sapiens (human)
heterophilic cell-cell adhesion via plasma membrane cell adhesion moleculesIntegrin alpha-LHomo sapiens (human)
leukocyte cell-cell adhesionIntegrin alpha-LHomo sapiens (human)
cell-matrix adhesionIntegrin alpha-LHomo sapiens (human)
signal transductionIntegrin alpha-LHomo sapiens (human)
integrin-mediated signaling pathwayIntegrin alpha-LHomo sapiens (human)
memory T cell extravasationIntegrin alpha-LHomo sapiens (human)
receptor clusteringIntegrin alpha-LHomo sapiens (human)
cell-cell adhesionIntegrin alpha-LHomo sapiens (human)
cell adhesion mediated by integrinIntegrin alpha-LHomo sapiens (human)
bicarbonate transportCarbonic anhydrase 4Homo sapiens (human)
one-carbon metabolic processCarbonic anhydrase 4Homo sapiens (human)
detection of chemical stimulus involved in sensory perception of bitter tasteCarbonic anhydrase 6Homo sapiens (human)
one-carbon metabolic processCarbonic anhydrase 6Homo sapiens (human)
purine ribonucleoside salvageAdenosine kinaseHomo sapiens (human)
dATP biosynthetic processAdenosine kinaseHomo sapiens (human)
ribonucleoside monophosphate biosynthetic processAdenosine kinaseHomo sapiens (human)
GMP salvageAdenosine kinaseHomo sapiens (human)
AMP salvageAdenosine kinaseHomo sapiens (human)
dAMP salvageAdenosine kinaseHomo sapiens (human)
purine nucleobase metabolic processAdenosine kinaseHomo sapiens (human)
[Information is prepared from geneontology information from the June-17-2024 release]

Molecular Functions (30)

Processvia Protein(s)Taxonomy
calcium channel activityTransient receptor potential cation channel subfamily A member 1Homo sapiens (human)
channel activityTransient receptor potential cation channel subfamily A member 1Homo sapiens (human)
intracellularly gated calcium channel activityTransient receptor potential cation channel subfamily A member 1Homo sapiens (human)
identical protein bindingTransient receptor potential cation channel subfamily A member 1Homo sapiens (human)
temperature-gated cation channel activityTransient receptor potential cation channel subfamily A member 1Homo sapiens (human)
arylesterase activityCarbonic anhydrase 1Homo sapiens (human)
carbonate dehydratase activityCarbonic anhydrase 1Homo sapiens (human)
protein bindingCarbonic anhydrase 1Homo sapiens (human)
zinc ion bindingCarbonic anhydrase 1Homo sapiens (human)
hydro-lyase activityCarbonic anhydrase 1Homo sapiens (human)
cyanamide hydratase activityCarbonic anhydrase 1Homo sapiens (human)
arylesterase activityCarbonic anhydrase 2Homo sapiens (human)
carbonate dehydratase activityCarbonic anhydrase 2Homo sapiens (human)
protein bindingCarbonic anhydrase 2Homo sapiens (human)
zinc ion bindingCarbonic anhydrase 2Homo sapiens (human)
cyanamide hydratase activityCarbonic anhydrase 2Homo sapiens (human)
cargo receptor activityIntegrin beta-2Homo sapiens (human)
amyloid-beta bindingIntegrin beta-2Homo sapiens (human)
complement component C3b bindingIntegrin beta-2Homo sapiens (human)
integrin bindingIntegrin beta-2Homo sapiens (human)
protein bindingIntegrin beta-2Homo sapiens (human)
protein kinase bindingIntegrin beta-2Homo sapiens (human)
ICAM-3 receptor activityIntegrin beta-2Homo sapiens (human)
heat shock protein bindingIntegrin beta-2Homo sapiens (human)
metal ion bindingIntegrin beta-2Homo sapiens (human)
cell adhesion molecule bindingIntegrin beta-2Homo sapiens (human)
virus receptor activityIntercellular adhesion molecule 1Homo sapiens (human)
transmembrane signaling receptor activityIntercellular adhesion molecule 1Homo sapiens (human)
integrin bindingIntercellular adhesion molecule 1Homo sapiens (human)
protein bindingIntercellular adhesion molecule 1Homo sapiens (human)
signaling receptor activityIntercellular adhesion molecule 1Homo sapiens (human)
DNA bindingTrp operon repressorEscherichia coli K-12
DNA-binding transcription factor activityTrp operon repressorEscherichia coli K-12
sequence-specific DNA bindingTrp operon repressorEscherichia coli K-12
protein bindingIntegrin alpha-LHomo sapiens (human)
ICAM-3 receptor activityIntegrin alpha-LHomo sapiens (human)
metal ion bindingIntegrin alpha-LHomo sapiens (human)
cell adhesion molecule bindingIntegrin alpha-LHomo sapiens (human)
integrin bindingIntegrin alpha-LHomo sapiens (human)
protein bindingCarbonic anhydrase 4Homo sapiens (human)
zinc ion bindingCarbonic anhydrase 4Homo sapiens (human)
carbonate dehydratase activityCarbonic anhydrase 4Homo sapiens (human)
zinc ion bindingCarbonic anhydrase 6Homo sapiens (human)
carbonate dehydratase activityCarbonic anhydrase 6Homo sapiens (human)
RNA bindingAdenosine kinaseHomo sapiens (human)
deoxyadenosine kinase activityAdenosine kinaseHomo sapiens (human)
ATP bindingAdenosine kinaseHomo sapiens (human)
metal ion bindingAdenosine kinaseHomo sapiens (human)
adenosine kinase activityAdenosine kinaseHomo sapiens (human)
zinc ion bindingCarbonic anhydrase 3Bos taurus (cattle)
[Information is prepared from geneontology information from the June-17-2024 release]

Ceullar Components (38)

Processvia Protein(s)Taxonomy
plasma membraneTransient receptor potential cation channel subfamily A member 1Homo sapiens (human)
stereocilium bundleTransient receptor potential cation channel subfamily A member 1Homo sapiens (human)
cytosolCarbonic anhydrase 1Homo sapiens (human)
extracellular exosomeCarbonic anhydrase 1Homo sapiens (human)
cytoplasmCarbonic anhydrase 2Homo sapiens (human)
cytosolCarbonic anhydrase 2Homo sapiens (human)
plasma membraneCarbonic anhydrase 2Homo sapiens (human)
myelin sheathCarbonic anhydrase 2Homo sapiens (human)
apical part of cellCarbonic anhydrase 2Homo sapiens (human)
extracellular exosomeCarbonic anhydrase 2Homo sapiens (human)
cytoplasmCarbonic anhydrase 2Homo sapiens (human)
plasma membraneCarbonic anhydrase 2Homo sapiens (human)
apical part of cellCarbonic anhydrase 2Homo sapiens (human)
plasma membraneIntegrin beta-2Homo sapiens (human)
external side of plasma membraneIntegrin beta-2Homo sapiens (human)
cell surfaceIntegrin beta-2Homo sapiens (human)
membraneIntegrin beta-2Homo sapiens (human)
integrin alphaL-beta2 complexIntegrin beta-2Homo sapiens (human)
integrin alphaM-beta2 complexIntegrin beta-2Homo sapiens (human)
integrin alphaX-beta2 complexIntegrin beta-2Homo sapiens (human)
specific granule membraneIntegrin beta-2Homo sapiens (human)
plasma membrane raftIntegrin beta-2Homo sapiens (human)
extracellular exosomeIntegrin beta-2Homo sapiens (human)
tertiary granule membraneIntegrin beta-2Homo sapiens (human)
ficolin-1-rich granule membraneIntegrin beta-2Homo sapiens (human)
extracellular vesicleIntegrin beta-2Homo sapiens (human)
integrin complexIntegrin beta-2Homo sapiens (human)
receptor complexIntegrin beta-2Homo sapiens (human)
focal adhesionIntegrin beta-2Homo sapiens (human)
cell surfaceIntegrin beta-2Homo sapiens (human)
immunological synapseIntercellular adhesion molecule 1Homo sapiens (human)
extracellular spaceIntercellular adhesion molecule 1Homo sapiens (human)
plasma membraneIntercellular adhesion molecule 1Homo sapiens (human)
focal adhesionIntercellular adhesion molecule 1Homo sapiens (human)
external side of plasma membraneIntercellular adhesion molecule 1Homo sapiens (human)
cell surfaceIntercellular adhesion molecule 1Homo sapiens (human)
membraneIntercellular adhesion molecule 1Homo sapiens (human)
membrane raftIntercellular adhesion molecule 1Homo sapiens (human)
collagen-containing extracellular matrixIntercellular adhesion molecule 1Homo sapiens (human)
extracellular exosomeIntercellular adhesion molecule 1Homo sapiens (human)
plasma membraneIntercellular adhesion molecule 1Homo sapiens (human)
cytoplasmTrp operon repressorEscherichia coli K-12
plasma membraneGlutamate receptor 2Rattus norvegicus (Norway rat)
plasma membraneIntegrin alpha-LHomo sapiens (human)
cell surfaceIntegrin alpha-LHomo sapiens (human)
membraneIntegrin alpha-LHomo sapiens (human)
integrin alphaL-beta2 complexIntegrin alpha-LHomo sapiens (human)
specific granule membraneIntegrin alpha-LHomo sapiens (human)
extracellular exosomeIntegrin alpha-LHomo sapiens (human)
integrin complexIntegrin alpha-LHomo sapiens (human)
external side of plasma membraneIntegrin alpha-LHomo sapiens (human)
basolateral plasma membraneCarbonic anhydrase 4Homo sapiens (human)
rough endoplasmic reticulumCarbonic anhydrase 4Homo sapiens (human)
endoplasmic reticulum-Golgi intermediate compartmentCarbonic anhydrase 4Homo sapiens (human)
Golgi apparatusCarbonic anhydrase 4Homo sapiens (human)
trans-Golgi networkCarbonic anhydrase 4Homo sapiens (human)
plasma membraneCarbonic anhydrase 4Homo sapiens (human)
external side of plasma membraneCarbonic anhydrase 4Homo sapiens (human)
cell surfaceCarbonic anhydrase 4Homo sapiens (human)
membraneCarbonic anhydrase 4Homo sapiens (human)
apical plasma membraneCarbonic anhydrase 4Homo sapiens (human)
transport vesicle membraneCarbonic anhydrase 4Homo sapiens (human)
secretory granule membraneCarbonic anhydrase 4Homo sapiens (human)
brush border membraneCarbonic anhydrase 4Homo sapiens (human)
perinuclear region of cytoplasmCarbonic anhydrase 4Homo sapiens (human)
extracellular exosomeCarbonic anhydrase 4Homo sapiens (human)
plasma membraneCarbonic anhydrase 4Homo sapiens (human)
extracellular regionCarbonic anhydrase 6Homo sapiens (human)
extracellular spaceCarbonic anhydrase 6Homo sapiens (human)
cytosolCarbonic anhydrase 6Homo sapiens (human)
extracellular exosomeCarbonic anhydrase 6Homo sapiens (human)
extracellular spaceCarbonic anhydrase 6Homo sapiens (human)
nucleoplasmAdenosine kinaseHomo sapiens (human)
cytosolAdenosine kinaseHomo sapiens (human)
plasma membraneAdenosine kinaseHomo sapiens (human)
nucleusAdenosine kinaseHomo sapiens (human)
cytosolAdenosine kinaseHomo sapiens (human)
[Information is prepared from geneontology information from the June-17-2024 release]

Bioassays (123)

Assay IDTitleYearJournalArticle
AID504749qHTS profiling for inhibitors of Plasmodium falciparum proliferation2011Science (New York, N.Y.), Aug-05, Volume: 333, Issue:6043
Chemical genomic profiling for antimalarial therapies, response signatures, and molecular targets.
AID343398Octanol-water distribution coefficient, log D at pH 7.4 by shake-flask technique2008Journal of medicinal chemistry, Jul-10, Volume: 51, Issue:13
Toward prediction of alkane/water partition coefficients.
AID571750Ratio of EC50 for Hepatitis C virus 796 infected in HuH7 cells to EC50 for Hepatitis C virus 796 harboring NNI P495L mutant site in NS5B infected in HuH7 cells2008Antimicrobial agents and chemotherapy, Dec, Volume: 52, Issue:12
1,5-benzodiazepines, a novel class of hepatitis C virus polymerase nonnucleoside inhibitors.
AID475504Binding affinity to amyloid beta (1 to 42) fibrils by change in fluorescence at 100 uM after 10 mins2009Bioorganic & medicinal chemistry letters, Sep-01, Volume: 19, Issue:17
A chemical screening approach reveals that indole fluorescence is quenched by pre-fibrillar but not fibrillar amyloid-beta.
AID652685Cytotoxicity against human MDA-MB-231 cells after 48 hrs by MTT assay2012Bioorganic & medicinal chemistry letters, Apr-01, Volume: 22, Issue:7
Iodine-catalyzed condensation of isatin with indoles: a facile synthesis of di(indolyl)indolin-2-ones and evaluation of their cytotoxicity.
AID343680Hexadecane-water distribution coefficient, log D at pH 7.4 by shake-flask technique2008Journal of medicinal chemistry, Jul-10, Volume: 51, Issue:13
Toward prediction of alkane/water partition coefficients.
AID1776788Induction of insulin secretion in rat INS1 cells assessed as increase in PDX-1 expression at 5 uM measured after 24 hrs by western blot assay2021Bioorganic & medicinal chemistry letters, 07-01, Volume: 43Identification of bioactive compounds from mulberry enhancing glucose-stimulated insulin secretion.
AID571753Ratio of EC50 for Hepatitis C virus 796 infected in HuH7 cells to EC50 for Hepatitis C virus 796 harboring NNI Y448A mutant site in NS5B infected in HuH7 cells2008Antimicrobial agents and chemotherapy, Dec, Volume: 52, Issue:12
1,5-benzodiazepines, a novel class of hepatitis C virus polymerase nonnucleoside inhibitors.
AID1776784Induction of insulin secretion in rat INS1 cells assessed as increase in phosphorylation of PI3K at 5 uM measured after 24 hrs by western blot assay2021Bioorganic & medicinal chemistry letters, 07-01, Volume: 43Identification of bioactive compounds from mulberry enhancing glucose-stimulated insulin secretion.
AID1439697Cytotoxicity against human IN1760 cells assessed as decrease in cell proliferation after 72 hrs by SRB assay2017Bioorganic & medicinal chemistry letters, 04-01, Volume: 27, Issue:7
Preliminary SAR on indole-3-carbinol and related fragments reveals a novel anticancer lead compound against resistant glioblastoma cells.
AID1682372Agonist activity at TRPA1 (unknown origin) by calcium imaging assay2021Bioorganic & medicinal chemistry letters, 01-01, Volume: 31Discovery of natural TRPA1 activators through pharmacophore-based virtual screening and a biological assay.
AID475505Binding affinity to amyloid beta (1 to 42) oligomers by change in fluorescence at 100 uM after 10 mins2009Bioorganic & medicinal chemistry letters, Sep-01, Volume: 19, Issue:17
A chemical screening approach reveals that indole fluorescence is quenched by pre-fibrillar but not fibrillar amyloid-beta.
AID1519676Retention time of compound at pH 7.4 by LC-UV analysis2020European journal of medicinal chemistry, Jan-01, Volume: 185Design of novel monoamine oxidase-B inhibitors based on piperine scaffold: Structure-activity-toxicity, drug-likeness and efflux transport studies.
AID1571459Antiproliferative activity against human U87MG cells after 72 hrs by sulforhodamine B assay2018MedChemComm, Nov-01, Volume: 9, Issue:11
Towards identifying potent new hits for glioblastoma.
AID23714Partition coefficient (logP)1988Journal of medicinal chemistry, Oct, Volume: 31, Issue:10
A comprehensive method for determining hydrophobicity constants by reversed-phase high-performance liquid chromatography.
AID1092124Inhibition of immune responses in Spodoptera exigua fifth-instar larvae assessed as inhibition of hemocytic nodulation in response to Escherichia coli challenge by stereomicroscopy2012Applied and environmental microbiology, Jun, Volume: 78, Issue:11
Phospholipase A2 inhibitors synthesized by two entomopathogenic bacteria, Xenorhabdus nematophila and Photorhabdus temperata subsp. temperata.
AID1310270Cytotoxicity against human Hep2 cells after 72 hrs by MTT assay2016European journal of medicinal chemistry, Aug-08, Volume: 118Synthesis and preliminary evaluation of 3-thiocyanato-1H-indoles as potential anticancer agents.
AID73214Residual porcine GSK-3-alpha/beta kinase activity with wild-type cytochrome P450 2A6 extract2004Journal of medicinal chemistry, Jun-03, Volume: 47, Issue:12
Generation of new protein kinase inhibitors utilizing cytochrome p450 mutant enzymes for indigoid synthesis.
AID1310269Cytotoxicity against human HL60 cells after 72 hrs by MTT assay2016European journal of medicinal chemistry, Aug-08, Volume: 118Synthesis and preliminary evaluation of 3-thiocyanato-1H-indoles as potential anticancer agents.
AID1571463Antiproliferative activity against human IN1760 cells after 72 hrs by sulforhodamine B assay2018MedChemComm, Nov-01, Volume: 9, Issue:11
Towards identifying potent new hits for glioblastoma.
AID1092126Inhibition of PLA2 in hemocytes of Spodoptera exigua fifth-instar larvae using pyrene-labeled phospholipid substrate by spectrofluorometry2012Applied and environmental microbiology, Jun, Volume: 78, Issue:11
Phospholipase A2 inhibitors synthesized by two entomopathogenic bacteria, Xenorhabdus nematophila and Photorhabdus temperata subsp. temperata.
AID1776774Stimulation of glucose stimulated insulin secretion in rat INS1 cells assessed as glucose stimulation index at 5 uM in presence of glucose measured after 1 hr2021Bioorganic & medicinal chemistry letters, 07-01, Volume: 43Identification of bioactive compounds from mulberry enhancing glucose-stimulated insulin secretion.
AID281482Inhibition of human intestinal carboxylesterase expressed in sf21 cells up to 100 uM2007Journal of medicinal chemistry, Apr-19, Volume: 50, Issue:8
Selective inhibition of carboxylesterases by isatins, indole-2,3-diones.
AID23978Capacity ratio (log k'w)1988Journal of medicinal chemistry, Oct, Volume: 31, Issue:10
A comprehensive method for determining hydrophobicity constants by reversed-phase high-performance liquid chromatography.
AID288184Permeability coefficient through artificial membrane in presence of unstirred water layer by PAMPA2007Bioorganic & medicinal chemistry, Jun-01, Volume: 15, Issue:11
QSAR study on permeability of hydrophobic compounds with artificial membranes.
AID571752Ratio of EC50 for Hepatitis C virus 796 infected in HuH7 cells to EC50 for Hepatitis C virus 796 harboring NNI M414Q mutant site in NS5B infected in HuH7 cells2008Antimicrobial agents and chemotherapy, Dec, Volume: 52, Issue:12
1,5-benzodiazepines, a novel class of hepatitis C virus polymerase nonnucleoside inhibitors.
AID73213Residual porcine GSK-3-alpha/beta kinase activity with L240C/N297Q mutant cytochrome P450 2A6 extract2004Journal of medicinal chemistry, Jun-03, Volume: 47, Issue:12
Generation of new protein kinase inhibitors utilizing cytochrome p450 mutant enzymes for indigoid synthesis.
AID1776771Cytotoxicity against rat INS1 cells assessed as cell viability at 1 to 10 uM measured after 24 hrs by MTT assay2021Bioorganic & medicinal chemistry letters, 07-01, Volume: 43Identification of bioactive compounds from mulberry enhancing glucose-stimulated insulin secretion.
AID220591Inhibition of human adenosine kinase2000Journal of medicinal chemistry, Dec-14, Volume: 43, Issue:25
Design of adenosine kinase inhibitors from the NMR-based screening of fragments.
AID1891831Lipid-water distribution ratio of the compound2022Journal of medicinal chemistry, 05-12, Volume: 65, Issue:9
Development of Azaindole-Based Frameworks as Potential Antiviral Agents and Their Future Perspectives.
AID1776786Induction of insulin secretion in rat INS1 cells assessed as increase in phosphorylation of AKT at Ser 473 at 5 uM measured after 24 hrs by western blot assay2021Bioorganic & medicinal chemistry letters, 07-01, Volume: 43Identification of bioactive compounds from mulberry enhancing glucose-stimulated insulin secretion.
AID237685Lipophilicity determined as logarithm of the partition coefficient in the alkane/water system2005Journal of medicinal chemistry, May-05, Volume: 48, Issue:9
Calculating virtual log P in the alkane/water system (log P(N)(alk)) and its derived parameters deltalog P(N)(oct-alk) and log D(pH)(alk).
AID1092125Inhibition of phenoloxidase activity in hemolymph of Spodoptera exigua fifth-instar larvae using DOPA substrate2012Applied and environmental microbiology, Jun, Volume: 78, Issue:11
Phospholipase A2 inhibitors synthesized by two entomopathogenic bacteria, Xenorhabdus nematophila and Photorhabdus temperata subsp. temperata.
AID763542Antioxidant activity assessed as inhibition of ABTS free radical generation at 17 uM after 20 mins by UV spectrophotometric analysis relative to control2013Bioorganic & medicinal chemistry, Aug-01, Volume: 21, Issue:15
Indole derivatives as dual-effective agents for the treatment of neurodegenerative diseases: synthesis, biological evaluation, and molecular modeling studies.
AID1310272Cytotoxicity against human MCF7 cells after 72 hrs by MTT assay2016European journal of medicinal chemistry, Aug-08, Volume: 118Synthesis and preliminary evaluation of 3-thiocyanato-1H-indoles as potential anticancer agents.
AID644084Inhibition of human carbonic anhydrase 1 using 4-nitrophenylacetate as substrate after 3 mins using spectrophotometry by Lineweaver-Burk plot analysis2012European journal of medicinal chemistry, Mar, Volume: 49Structure-activity relationships for the interaction of 5,10-dihydroindeno[1,2-b]indole derivatives with human and bovine carbonic anhydrase isoforms I, II, III, IV and VI.
AID475508Inhibition of amyloid beta (1 to 42) aggregation induced by thioflavin after 48 hrs by fluorescence imaging2009Bioorganic & medicinal chemistry letters, Sep-01, Volume: 19, Issue:17
A chemical screening approach reveals that indole fluorescence is quenched by pre-fibrillar but not fibrillar amyloid-beta.
AID54189Residual Cyclin-dependent kinase 5-p35nck5a activity with wild-type cytochrome P450 2A6 extract2004Journal of medicinal chemistry, Jun-03, Volume: 47, Issue:12
Generation of new protein kinase inhibitors utilizing cytochrome p450 mutant enzymes for indigoid synthesis.
AID571755Ratio of EC50 for Hepatitis C virus 796 infected in HuH7 cells to EC50 for Hepatitis C virus 796 harboring NNI C316Y mutant site in NS5B infected in HuH7 cells2008Antimicrobial agents and chemotherapy, Dec, Volume: 52, Issue:12
1,5-benzodiazepines, a novel class of hepatitis C virus polymerase nonnucleoside inhibitors.
AID475507Binding affinity to amyloid beta (1 to 42) oligomers by fluorescence quenching after 30 mins2009Bioorganic & medicinal chemistry letters, Sep-01, Volume: 19, Issue:17
A chemical screening approach reveals that indole fluorescence is quenched by pre-fibrillar but not fibrillar amyloid-beta.
AID763541Antioxidant activity assessed as inhibition of ABTS free radical generation at 9 uM after 20 mins by UV spectrophotometric analysis relative to control2013Bioorganic & medicinal chemistry, Aug-01, Volume: 21, Issue:15
Indole derivatives as dual-effective agents for the treatment of neurodegenerative diseases: synthesis, biological evaluation, and molecular modeling studies.
AID281483Inhibition of human liver CE1 expressed in sf21 cells up to 100 uM2007Journal of medicinal chemistry, Apr-19, Volume: 50, Issue:8
Selective inhibition of carboxylesterases by isatins, indole-2,3-diones.
AID281484Inhibition of rabbit liver carboxylesterase expressed in sf21 cells up to 100 uM2007Journal of medicinal chemistry, Apr-19, Volume: 50, Issue:8
Selective inhibition of carboxylesterases by isatins, indole-2,3-diones.
AID644085Inhibition of human carbonic anhydrase 2 using 4-nitrophenylacetate as substrate after 3 mins using spectrophotometry by Lineweaver-Burk plot analysis2012European journal of medicinal chemistry, Mar, Volume: 49Structure-activity relationships for the interaction of 5,10-dihydroindeno[1,2-b]indole derivatives with human and bovine carbonic anhydrase isoforms I, II, III, IV and VI.
AID1133966Antiulcer activity in po dosed albino rat pyloric ligation model assessed as inhibition of gastric secretion administered as single dose 1 to 24 hrs prior to ligation1977Journal of medicinal chemistry, Apr, Volume: 20, Issue:4
Experimental antiulcer drugs. 1. Indole-1-alkanamides and pyrrole-1-alkanamides.
AID1571460Antiproliferative activity against human U251MG cells after 72 hrs by sulforhodamine B assay2018MedChemComm, Nov-01, Volume: 9, Issue:11
Towards identifying potent new hits for glioblastoma.
AID1776782Induction of insulin secretion in rat INS1 cells assessed as increase in phosphorylation of IRS 2 at Ser 731 at 5 uM measured after 24 hrs by western blot assay2021Bioorganic & medicinal chemistry letters, 07-01, Volume: 43Identification of bioactive compounds from mulberry enhancing glucose-stimulated insulin secretion.
AID1439695Cytotoxicity against human IN1472 cells assessed as decrease in cell proliferation after 72 hrs by SRB assay2017Bioorganic & medicinal chemistry letters, 04-01, Volume: 27, Issue:7
Preliminary SAR on indole-3-carbinol and related fragments reveals a novel anticancer lead compound against resistant glioblastoma cells.
AID1776783Induction of insulin secretion in rat INS1 cells assessed as increase in IRS-2 expression at 5 uM measured after 24 hrs by western blot assay2021Bioorganic & medicinal chemistry letters, 07-01, Volume: 43Identification of bioactive compounds from mulberry enhancing glucose-stimulated insulin secretion.
AID288192Partition coefficient, log P of the compound2007Bioorganic & medicinal chemistry, Jun-01, Volume: 15, Issue:11
QSAR study on permeability of hydrophobic compounds with artificial membranes.
AID332912Antimicrobial activity Propionibacterium acnes ATCC 11827 after 2 days by broth dilution method1994Journal of natural products, Jan, Volume: 57, Issue:1
Naturally occurring antiacne agents.
AID1439694Cytotoxicity against human U251 cells assessed as decrease in cell proliferation after 72 hrs by SRB assay2017Bioorganic & medicinal chemistry letters, 04-01, Volume: 27, Issue:7
Preliminary SAR on indole-3-carbinol and related fragments reveals a novel anticancer lead compound against resistant glioblastoma cells.
AID238119Dissociation constant against T4 lysozyme mutant L99A2005Journal of medicinal chemistry, Jun-02, Volume: 48, Issue:11
Decoys for docking.
AID19262Aqueous solubility2000Bioorganic & medicinal chemistry letters, Jun-05, Volume: 10, Issue:11
Prediction of drug solubility from Monte Carlo simulations.
AID1571461Antiproliferative activity against human IN1472 cells after 72 hrs by sulforhodamine B assay2018MedChemComm, Nov-01, Volume: 9, Issue:11
Towards identifying potent new hits for glioblastoma.
AID1776773Stimulation of glucose stimulated insulin secretion in rat INS1 cells assessed as glucose stimulation index at 2.5 uM in presence of glucose measured after 1 hr2021Bioorganic & medicinal chemistry letters, 07-01, Volume: 43Identification of bioactive compounds from mulberry enhancing glucose-stimulated insulin secretion.
AID1891830Basic dissociation constant, pKa of the compound2022Journal of medicinal chemistry, 05-12, Volume: 65, Issue:9
Development of Azaindole-Based Frameworks as Potential Antiviral Agents and Their Future Perspectives.
AID763540Antioxidant activity assessed as inhibition of ABTS free radical generation at 33 uM after 20 mins by UV spectrophotometric analysis relative to control2013Bioorganic & medicinal chemistry, Aug-01, Volume: 21, Issue:15
Indole derivatives as dual-effective agents for the treatment of neurodegenerative diseases: synthesis, biological evaluation, and molecular modeling studies.
AID23454Partition coefficient (logP)1990Journal of medicinal chemistry, Sep, Volume: 33, Issue:9
Synthesis and in vitro LTD4 antagonist activity of bicyclic and monocyclic cyclopentylurethane and cyclopentylacetamide N-arylsulfonyl amides.
AID571751Ratio of EC50 for Hepatitis C virus 796 infected in HuH7 cells to EC50 for Hepatitis C virus 796 harboring NNI M423T mutant site in NS5B infected in HuH7 cells2008Antimicrobial agents and chemotherapy, Dec, Volume: 52, Issue:12
1,5-benzodiazepines, a novel class of hepatitis C virus polymerase nonnucleoside inhibitors.
AID1439693Cytotoxicity against human U87 cells assessed as decrease in cell proliferation after 72 hrs by SRB assay2017Bioorganic & medicinal chemistry letters, 04-01, Volume: 27, Issue:7
Preliminary SAR on indole-3-carbinol and related fragments reveals a novel anticancer lead compound against resistant glioblastoma cells.
AID571754Ratio of EC50 for Hepatitis C virus 796 infected in HuH7 cells to EC50 for Hepatitis C virus 796 harboring NNI H95R mutant site in NS5B infected in HuH7 cells2008Antimicrobial agents and chemotherapy, Dec, Volume: 52, Issue:12
1,5-benzodiazepines, a novel class of hepatitis C virus polymerase nonnucleoside inhibitors.
AID1064677Antioxidant activity of the compound assessed as inhibition of ABTS radicals at 33 uM after 20 mins by spectrophotometric analysis2014Bioorganic & medicinal chemistry, Feb-01, Volume: 22, Issue:3
Synthesis, modelling and biological characterization of 3-substituted-1H-indoles as ligands of GluN2B-containing N-methyl-d-aspartate receptors.
AID236904Partition coefficient (logP)2005Bioorganic & medicinal chemistry letters, Jul-01, Volume: 15, Issue:13
Synthesis of selective SRPK-1 inhibitors: novel tricyclic quinoxaline derivatives.
AID203473Binding constant against bovine serum albumin1988Journal of medicinal chemistry, Oct, Volume: 31, Issue:10
A comprehensive method for determining hydrophobicity constants by reversed-phase high-performance liquid chromatography.
AID1092123Insecticidal activity against Plutella xylostella (diamondback moth) fourth-instar larvae fed on cabbage leaves soaked in compound solutions measured 48 hr post compound treatment by leaf-dipping method2012Applied and environmental microbiology, Jun, Volume: 78, Issue:11
Phospholipase A2 inhibitors synthesized by two entomopathogenic bacteria, Xenorhabdus nematophila and Photorhabdus temperata subsp. temperata.
AID1064674Antioxidant activity of the compound assessed as inhibition of ABTS radicals after 20 mins by spectrophotometric analysis2014Bioorganic & medicinal chemistry, Feb-01, Volume: 22, Issue:3
Synthesis, modelling and biological characterization of 3-substituted-1H-indoles as ligands of GluN2B-containing N-methyl-d-aspartate receptors.
AID475506Binding affinity to amyloid beta (1 to 42) fibrils by fluorescence quenching after 30 mins2009Bioorganic & medicinal chemistry letters, Sep-01, Volume: 19, Issue:17
A chemical screening approach reveals that indole fluorescence is quenched by pre-fibrillar but not fibrillar amyloid-beta.
AID1133965Antiulcer activity in sc dosed albino rat pyloric ligation model assessed as inhibition of gastric secretion administered as single dose 1 to 24 hrs prior to ligation1977Journal of medicinal chemistry, Apr, Volume: 20, Issue:4
Experimental antiulcer drugs. 1. Indole-1-alkanamides and pyrrole-1-alkanamides.
AID652686Cytotoxicity against human SK-N-SH cells after 48 hrs by MTT assay2012Bioorganic & medicinal chemistry letters, Apr-01, Volume: 22, Issue:7
Iodine-catalyzed condensation of isatin with indoles: a facile synthesis of di(indolyl)indolin-2-ones and evaluation of their cytotoxicity.
AID644087Inhibition of human carbonic anhydrase 6 using 4-nitrophenylacetate as substrate after 3 mins using spectrophotometry by Lineweaver-Burk plot analysis2012European journal of medicinal chemistry, Mar, Volume: 49Structure-activity relationships for the interaction of 5,10-dihydroindeno[1,2-b]indole derivatives with human and bovine carbonic anhydrase isoforms I, II, III, IV and VI.
AID652687Cytotoxicity against human A549 cells after 48 hrs by MTT assay2012Bioorganic & medicinal chemistry letters, Apr-01, Volume: 22, Issue:7
Iodine-catalyzed condensation of isatin with indoles: a facile synthesis of di(indolyl)indolin-2-ones and evaluation of their cytotoxicity.
AID1439696Cytotoxicity against human IN1528 cells assessed as decrease in cell proliferation after 72 hrs by SRB assay2017Bioorganic & medicinal chemistry letters, 04-01, Volume: 27, Issue:7
Preliminary SAR on indole-3-carbinol and related fragments reveals a novel anticancer lead compound against resistant glioblastoma cells.
AID99593Inhibition of JY-8 cell adhesion via leukocyte function associated antigen 1 (LFA-1) to ICAM-12001Journal of medicinal chemistry, Apr-12, Volume: 44, Issue:8
Novel p-arylthio cinnamides as antagonists of leukocyte function-associated antigen-1/intracellular adhesion molecule-1 interaction. 2. Mechanism of inhibition and structure-based improvement of pharmaceutical properties.
AID652688Cytotoxicity against human MRC5 cells after 48 hrs by MTT assay2012Bioorganic & medicinal chemistry letters, Apr-01, Volume: 22, Issue:7
Iodine-catalyzed condensation of isatin with indoles: a facile synthesis of di(indolyl)indolin-2-ones and evaluation of their cytotoxicity.
AID1776785Induction of insulin secretion in rat INS1 cells assessed as increase in PI3K expression at 5 uM measured after 24 hrs by western blot assay2021Bioorganic & medicinal chemistry letters, 07-01, Volume: 43Identification of bioactive compounds from mulberry enhancing glucose-stimulated insulin secretion.
AID1571462Antiproliferative activity against human IN1528 cells after 72 hrs by sulforhodamine B assay2018MedChemComm, Nov-01, Volume: 9, Issue:11
Towards identifying potent new hits for glioblastoma.
AID1682371Agonist activity at TRPA1 (unknown origin) by calcium imaging assay relative to allyl isothiocyanate2021Bioorganic & medicinal chemistry letters, 01-01, Volume: 31Discovery of natural TRPA1 activators through pharmacophore-based virtual screening and a biological assay.
AID34005Dissociation constant against adenosine kinase2004Journal of medicinal chemistry, Jul-01, Volume: 47, Issue:14
Fragment-based drug discovery.
AID1310271Cytotoxicity against human NCI-H292 cells after 72 hrs by MTT assay2016European journal of medicinal chemistry, Aug-08, Volume: 118Synthesis and preliminary evaluation of 3-thiocyanato-1H-indoles as potential anticancer agents.
AID99595Dissociation constant for Leukocyte function associated antigen 1 (LFA-1)2004Journal of medicinal chemistry, Jul-01, Volume: 47, Issue:14
Fragment-based drug discovery.
AID1776787Induction of insulin secretion in rat INS1 cells assessed as increase in AKT expression at 5 uM measured after 24 hrs by western blot assay2021Bioorganic & medicinal chemistry letters, 07-01, Volume: 43Identification of bioactive compounds from mulberry enhancing glucose-stimulated insulin secretion.
AID1254103Binding affinity to rabbit muscle glycogen phosphorylase measured for 0.5 to 4 secs by STD NMR spectrometric analysis2015Journal of medicinal chemistry, Nov-12, Volume: 58, Issue:21
Ligand-Orientation Based Fragment Selection in STD NMR Screening.
AID54188Residual Cyclin-dependent kinase 5-p35nck5a activity with L240C/N297Q mutant cytochrome P450 2A6 extract2004Journal of medicinal chemistry, Jun-03, Volume: 47, Issue:12
Generation of new protein kinase inhibitors utilizing cytochrome p450 mutant enzymes for indigoid synthesis.
AID644086Inhibition of human carbonic anhydrase 4 using 4-nitrophenylacetate as substrate after 3 mins using spectrophotometry by Lineweaver-Burk plot analysis2012European journal of medicinal chemistry, Mar, Volume: 49Structure-activity relationships for the interaction of 5,10-dihydroindeno[1,2-b]indole derivatives with human and bovine carbonic anhydrase isoforms I, II, III, IV and VI.
AID1092122Potentiation of 1000 ppm Bacillus thuringiensis-induced pathogenicity against Plutella xylostella (diamondback moth) fourth-instar larvae at 10000 ppm measured 48 hr post compound treatment2012Applied and environmental microbiology, Jun, Volume: 78, Issue:11
Phospholipase A2 inhibitors synthesized by two entomopathogenic bacteria, Xenorhabdus nematophila and Photorhabdus temperata subsp. temperata.
AID644088Inhibition of bovine carbonic anhydrase 3 using 4-nitrophenylacetate as substrate after 3 mins using spectrophotometry by Lineweaver-Burk plot analysis2012European journal of medicinal chemistry, Mar, Volume: 49Structure-activity relationships for the interaction of 5,10-dihydroindeno[1,2-b]indole derivatives with human and bovine carbonic anhydrase isoforms I, II, III, IV and VI.
AID1519674Chromatographic hydrophobicity index of compound at 250 uM at pH 7.4 by HPLC analysis2020European journal of medicinal chemistry, Jan-01, Volume: 185Design of novel monoamine oxidase-B inhibitors based on piperine scaffold: Structure-activity-toxicity, drug-likeness and efflux transport studies.
AID1347154Primary screen GU AMC qHTS for Zika virus inhibitors2020Proceedings of the National Academy of Sciences of the United States of America, 12-08, Volume: 117, Issue:49
Therapeutic candidates for the Zika virus identified by a high-throughput screen for Zika protease inhibitors.
AID1347094qHTS of pediatric cancer cell lines to identify multiple opportunities for drug repurposing: Primary screen for BT-37 cells2018Oncotarget, Jan-12, Volume: 9, Issue:4
Quantitative high-throughput phenotypic screening of pediatric cancer cell lines identifies multiple opportunities for drug repurposing.
AID1347108qHTS of pediatric cancer cell lines to identify multiple opportunities for drug repurposing: Primary screen for Rh41 cells2018Oncotarget, Jan-12, Volume: 9, Issue:4
Quantitative high-throughput phenotypic screening of pediatric cancer cell lines identifies multiple opportunities for drug repurposing.
AID1347097qHTS of pediatric cancer cell lines to identify multiple opportunities for drug repurposing: Primary screen for Saos-2 cells2018Oncotarget, Jan-12, Volume: 9, Issue:4
Quantitative high-throughput phenotypic screening of pediatric cancer cell lines identifies multiple opportunities for drug repurposing.
AID1347425Rhodamine-PBP qHTS Assay for Modulators of WT P53-Induced Phosphatase 1 (WIP1)2019The Journal of biological chemistry, 11-15, Volume: 294, Issue:46
Physiologically relevant orthogonal assays for the discovery of small-molecule modulators of WIP1 phosphatase in high-throughput screens.
AID1347098qHTS of pediatric cancer cell lines to identify multiple opportunities for drug repurposing: Primary screen for SK-N-SH cells2018Oncotarget, Jan-12, Volume: 9, Issue:4
Quantitative high-throughput phenotypic screening of pediatric cancer cell lines identifies multiple opportunities for drug repurposing.
AID1296008Cytotoxic Profiling of Annotated Libraries Using Quantitative High-Throughput Screening2020SLAS discovery : advancing life sciences R & D, 01, Volume: 25, Issue:1
Cytotoxic Profiling of Annotated and Diverse Chemical Libraries Using Quantitative High-Throughput Screening.
AID1347102qHTS of pediatric cancer cell lines to identify multiple opportunities for drug repurposing: Primary screen for Rh18 cells2018Oncotarget, Jan-12, Volume: 9, Issue:4
Quantitative high-throughput phenotypic screening of pediatric cancer cell lines identifies multiple opportunities for drug repurposing.
AID1508630Primary qHTS for small molecule stabilizers of the endoplasmic reticulum resident proteome: Secreted ER Calcium Modulated Protein (SERCaMP) assay2021Cell reports, 04-27, Volume: 35, Issue:4
A target-agnostic screen identifies approved drugs to stabilize the endoplasmic reticulum-resident proteome.
AID1347091qHTS of pediatric cancer cell lines to identify multiple opportunities for drug repurposing: Primary screen for SJ-GBM2 cells2018Oncotarget, Jan-12, Volume: 9, Issue:4
Quantitative high-throughput phenotypic screening of pediatric cancer cell lines identifies multiple opportunities for drug repurposing.
AID1347096qHTS of pediatric cancer cell lines to identify multiple opportunities for drug repurposing: Primary screen for U-2 OS cells2018Oncotarget, Jan-12, Volume: 9, Issue:4
Quantitative high-throughput phenotypic screening of pediatric cancer cell lines identifies multiple opportunities for drug repurposing.
AID1347093qHTS of pediatric cancer cell lines to identify multiple opportunities for drug repurposing: Primary screen for SK-N-MC cells2018Oncotarget, Jan-12, Volume: 9, Issue:4
Quantitative high-throughput phenotypic screening of pediatric cancer cell lines identifies multiple opportunities for drug repurposing.
AID1347095qHTS of pediatric cancer cell lines to identify multiple opportunities for drug repurposing: Primary screen for NB-EBc1 cells2018Oncotarget, Jan-12, Volume: 9, Issue:4
Quantitative high-throughput phenotypic screening of pediatric cancer cell lines identifies multiple opportunities for drug repurposing.
AID1347092qHTS of pediatric cancer cell lines to identify multiple opportunities for drug repurposing: Primary screen for A673 cells2018Oncotarget, Jan-12, Volume: 9, Issue:4
Quantitative high-throughput phenotypic screening of pediatric cancer cell lines identifies multiple opportunities for drug repurposing.
AID1347083qHTS for Inhibitors of the Functional Ribonucleoprotein Complex (vRNP) of Lassa (LASV) Arenavirus: Viability assay - alamar blue signal for LASV Primary Screen2020Antiviral research, 01, Volume: 173A cell-based, infectious-free, platform to identify inhibitors of lassa virus ribonucleoprotein (vRNP) activity.
AID1347101qHTS of pediatric cancer cell lines to identify multiple opportunities for drug repurposing: Primary screen for BT-12 cells2018Oncotarget, Jan-12, Volume: 9, Issue:4
Quantitative high-throughput phenotypic screening of pediatric cancer cell lines identifies multiple opportunities for drug repurposing.
AID1347104qHTS of pediatric cancer cell lines to identify multiple opportunities for drug repurposing: Primary screen for RD cells2018Oncotarget, Jan-12, Volume: 9, Issue:4
Quantitative high-throughput phenotypic screening of pediatric cancer cell lines identifies multiple opportunities for drug repurposing.
AID1347106qHTS of pediatric cancer cell lines to identify multiple opportunities for drug repurposing: Primary screen for control Hh wild type fibroblast cells2018Oncotarget, Jan-12, Volume: 9, Issue:4
Quantitative high-throughput phenotypic screening of pediatric cancer cell lines identifies multiple opportunities for drug repurposing.
AID1347103qHTS of pediatric cancer cell lines to identify multiple opportunities for drug repurposing: Primary screen for OHS-50 cells2018Oncotarget, Jan-12, Volume: 9, Issue:4
Quantitative high-throughput phenotypic screening of pediatric cancer cell lines identifies multiple opportunities for drug repurposing.
AID1347407qHTS to identify inhibitors of the type 1 interferon - major histocompatibility complex class I in skeletal muscle: primary screen against the NCATS Pharmaceutical Collection2020ACS chemical biology, 07-17, Volume: 15, Issue:7
High-Throughput Screening to Identify Inhibitors of the Type I Interferon-Major Histocompatibility Complex Class I Pathway in Skeletal Muscle.
AID1347089qHTS of pediatric cancer cell lines to identify multiple opportunities for drug repurposing: Primary screen for TC32 cells2018Oncotarget, Jan-12, Volume: 9, Issue:4
Quantitative high-throughput phenotypic screening of pediatric cancer cell lines identifies multiple opportunities for drug repurposing.
AID1347099qHTS of pediatric cancer cell lines to identify multiple opportunities for drug repurposing: Primary screen for NB1643 cells2018Oncotarget, Jan-12, Volume: 9, Issue:4
Quantitative high-throughput phenotypic screening of pediatric cancer cell lines identifies multiple opportunities for drug repurposing.
AID1347100qHTS of pediatric cancer cell lines to identify multiple opportunities for drug repurposing: Primary screen for LAN-5 cells2018Oncotarget, Jan-12, Volume: 9, Issue:4
Quantitative high-throughput phenotypic screening of pediatric cancer cell lines identifies multiple opportunities for drug repurposing.
AID1347082qHTS for Inhibitors of the Functional Ribonucleoprotein Complex (vRNP) of Lassa (LASV) Arenavirus: LASV Primary Screen - GLuc reporter signal2020Antiviral research, 01, Volume: 173A cell-based, infectious-free, platform to identify inhibitors of lassa virus ribonucleoprotein (vRNP) activity.
AID1347105qHTS of pediatric cancer cell lines to identify multiple opportunities for drug repurposing: Primary screen for MG 63 (6-TG R) cells2018Oncotarget, Jan-12, Volume: 9, Issue:4
Quantitative high-throughput phenotypic screening of pediatric cancer cell lines identifies multiple opportunities for drug repurposing.
AID1745845Primary qHTS for Inhibitors of ATXN expression
AID1347086qHTS for Inhibitors of the Functional Ribonucleoprotein Complex (vRNP) of Lymphocytic Choriomeningitis Arenaviruses (LCMV): LCMV Primary Screen - GLuc reporter signal2020Antiviral research, 01, Volume: 173A cell-based, infectious-free, platform to identify inhibitors of lassa virus ribonucleoprotein (vRNP) activity.
AID1347107qHTS of pediatric cancer cell lines to identify multiple opportunities for drug repurposing: Primary screen for Rh30 cells2018Oncotarget, Jan-12, Volume: 9, Issue:4
Quantitative high-throughput phenotypic screening of pediatric cancer cell lines identifies multiple opportunities for drug repurposing.
AID1347424RapidFire Mass Spectrometry qHTS Assay for Modulators of WT P53-Induced Phosphatase 1 (WIP1)2019The Journal of biological chemistry, 11-15, Volume: 294, Issue:46
Physiologically relevant orthogonal assays for the discovery of small-molecule modulators of WIP1 phosphatase in high-throughput screens.
AID1347090qHTS of pediatric cancer cell lines to identify multiple opportunities for drug repurposing: Primary screen for DAOY cells2018Oncotarget, Jan-12, Volume: 9, Issue:4
Quantitative high-throughput phenotypic screening of pediatric cancer cell lines identifies multiple opportunities for drug repurposing.
AID651635Viability Counterscreen for Primary qHTS for Inhibitors of ATXN expression
AID1346986P-glycoprotein substrates identified in KB-3-1 adenocarcinoma cell line, qHTS therapeutic library screen2019Molecular pharmacology, 11, Volume: 96, Issue:5
A High-Throughput Screen of a Library of Therapeutics Identifies Cytotoxic Substrates of P-glycoprotein.
AID1346987P-glycoprotein substrates identified in KB-8-5-11 adenocarcinoma cell line, qHTS therapeutic library screen2019Molecular pharmacology, 11, Volume: 96, Issue:5
A High-Throughput Screen of a Library of Therapeutics Identifies Cytotoxic Substrates of P-glycoprotein.
AID1799822Binding Assay from Article : \\The structural basis for the interaction between L-tryptophan and the Escherichia coli trp aporepressor.\\1987The Journal of biological chemistry, Apr-05, Volume: 262, Issue:10
The structural basis for the interaction between L-tryptophan and the Escherichia coli trp aporepressor.
AID977611Experimentally measured binding affinity data (Kd) for protein-ligand complexes derived from PDB2005Journal of medicinal chemistry, Jun-02, Volume: 48, Issue:11
Decoys for docking.
[information is prepared from bioassay data collected from National Library of Medicine (NLM), extracted Dec-2023]

Research

Studies (1,871)

TimeframeStudies, This Drug (%)All Drugs %
pre-1990484 (25.87)18.7374
1990's91 (4.86)18.2507
2000's320 (17.10)29.6817
2010's766 (40.94)24.3611
2020's210 (11.22)2.80
[information is prepared from research data collected from National Library of Medicine (NLM), extracted Dec-2023]

Market Indicators

Research Demand Index: 88.08

According to the monthly volume, diversity, and competition of internet searches for this compound, as well the volume and growth of publications, there is estimated to be very strong demand-to-supply ratio for research on this compound.

MetricThis Compound (vs All)
Research Demand Index88.08 (24.57)
Research Supply Index7.56 (2.92)
Research Growth Index5.01 (4.65)
Search Engine Demand Index159.96 (26.88)
Search Engine Supply Index2.00 (0.95)

This Compound (88.08)

All Compounds (24.57)

Study Types

Publication TypeThis drug (%)All Drugs (%)
Trials8 (0.42%)5.53%
Reviews76 (3.97%)6.00%
Case Studies5 (0.26%)4.05%
Observational0 (0.00%)0.25%
Other1,823 (95.35%)84.16%
[information is prepared from research data collected from National Library of Medicine (NLM), extracted Dec-2023]