Page last updated: 2024-12-10

9-deoxy-delta-9-prostaglandin d2

Description Research Excerpts Clinical Trials Roles Classes Pathways Study Profile Bioassays Related Drugs Related Conditions Protein Interactions Research Growth Market Indicators

Description

9-deoxy-delta-9-prostaglandin D2: has potent antineoplastic & weak smooth muscle contracting activities; structure given in first source [Medical Subject Headings (MeSH), National Library of Medicine, extracted Dec-2023]

prostaglandin J2 : A member of the class of prostaglandins J that consists of prosta-5,9,13-trien-1-oic acid substituted by an oxo group at position 11 and a hydroxy group at position 15 (the 5Z,13E,15S stereoisomer). [Chemical Entities of Biological Interest (ChEBI), Hastings J, Owen G, Dekker A, Ennis M, Kale N, Muthukrishnan V, Turner S, Swainston N, Mendes P, Steinbeck C. (2016). ChEBI in 2016: Improved services and an expanding collection of metabolites. Nucleic Acids Res]

Cross-References

ID SourceID
PubMed CID5280884
CHEMBL ID1397260
CHEBI ID27485
SCHEMBL ID5700581
MeSH IDM0112520

Synonyms (45)

Synonym
(5z,13e,15s)-15-hydroxy-11-oxoprosta-5,9,13-trien-1-oic acid
CHEBI:27485 ,
9-deoxy-delta-9-pgd2
BRD-K56811497-001-03-2
(z)-7-[(1s,5r)-5-[(e,3s)-3-hydroxyoct-1-enyl]-4-oxo-1-cyclopent-2-enyl]hept-5-enoic acid
gtpl1885
IDI1_033968
8-epi-15-j2t-isop
LMFA03010019
11-oxo-15s-hydroxy-5z,9,13e-prostatrienoic acid
11-oxo-15s-hydroxy-5z,9,13e-prostatrienoic acid-cyclo[8s,12r]
SMP2_000100
C05957
60203-57-8
prostaglandin j2
pgj2
prosta-5,9,13-trien-1-oic acid, 15-hydroxy-11-oxo-, (5z,13e,15s)-
(z)-7-[(1s,5r)-5-[(e,3s)-3-hydroxyoct-1-enyl]-4-oxo-cyclopent-2-en-1-yl]hept-5-enoic acid
9-deoxy-delta-9-prostaglandin d2
BSPBIO_001498
NCGC00161294-01
NCGC00161294-02
NCGC00161294-03
HMS1989K20
BML1-G07
HMS1361K20
HMS1791K20
(z)-7-[(1s,5r)-5-[(e,3s)-3-hydroxyoct-1-enyl]-4-oxocyclopent-2-en-1-yl]hept-5-enoic acid
SCHEMBL5700581
AKOS024418774
CHEMBL1397260 ,
HMS3402K20
HMS3648L18
DTXSID4041105
pgj2 (prostaglandin j2)
11-oxo-15s-hydroxy-5z,8z,13e-prostatrienoate
11-oxo-15s-hydroxy-5z,8z,13e-prostatrienoic acid
sr-05000002330
SR-05000002330-2
prostaglandin j2 lipid maps(r) ms standard
Q27088353
SR-05000002330-3
bdbm50594729
CS-0062302
HY-113366

Research Excerpts

Dosage Studied

ExcerptRelevanceReference
" Lipid microspheres and Lipiodol formulation were examined as dosage form of the PGs and lipid microspheres were selected for further study."( Preparation and evaluation of o/w type emulsions containing antitumor prostaglandin.
Fukushima, M; Fukushima, S; Kishimoto, S; Takeuchi, Y, 2000
)
0.31
[information is derived through text-mining from research data collected from National Library of Medicine (NLM), extracted Dec-2023]

Roles (1)

RoleDescription
human metaboliteAny mammalian metabolite produced during a metabolic reaction in humans (Homo sapiens).
[role information is derived from Chemical Entities of Biological Interest (ChEBI), Hastings J, Owen G, Dekker A, Ennis M, Kale N, Muthukrishnan V, Turner S, Swainston N, Mendes P, Steinbeck C. (2016). ChEBI in 2016: Improved services and an expanding collection of metabolites. Nucleic Acids Res]

Drug Classes (1)

ClassDescription
prostaglandins J
[compound class information is derived from Chemical Entities of Biological Interest (ChEBI), Hastings J, Owen G, Dekker A, Ennis M, Kale N, Muthukrishnan V, Turner S, Swainston N, Mendes P, Steinbeck C. (2016). ChEBI in 2016: Improved services and an expanding collection of metabolites. Nucleic Acids Res]

Pathways (50)

PathwayProteinsCompounds
Metabolism14961108
Metabolism of lipids500463
Fatty acid metabolism113203
Arachidonic acid metabolism3682
Synthesis of Prostaglandins (PG) and Thromboxanes (TX)1135
Arachidonic Acid Metabolism2966
Leukotriene C4 Synthesis Deficiency2966
Piroxicam Action Pathway2967
Acetylsalicylic Acid Action Pathway2967
Etodolac Action Pathway2967
Ketoprofen Action Pathway2967
Ibuprofen Action Pathway5076
Rofecoxib Action Pathway2967
Diclofenac Action Pathway2967
Sulindac Action Pathway2967
Celecoxib Action Pathway3573
Ketorolac Action Pathway2967
Suprofen Action Pathway2967
Bromfenac Action Pathway2967
Indomethacin Action Pathway3067
Mefenamic Acid Action Pathway2967
Oxaprozin Action Pathway2967
Nabumetone Action Pathway2967
Naproxen Action Pathway2967
Diflunisal Action Pathway2967
Meloxicam Action Pathway2967
Valdecoxib Action Pathway2967
Antipyrine Action Pathway2967
Antrafenine Action Pathway2967
Carprofen Action Pathway2967
Etoricoxib Action Pathway2967
Fenoprofen Action Pathway2967
Flurbiprofen Action Pathway2967
Magnesium Salicylate Action Pathway2967
Lumiracoxib Action Pathway2967
Lornoxicam Action Pathway2967
Phenylbutazone Action Pathway2967
Nepafenac Action Pathway2967
Trisalicylate-Choline Action Pathway2967
Tolmetin Action Pathway2967
Tiaprofenic Acid Action Pathway2967
Tenoxicam Action Pathway2967
Salsalate Action Pathway2967
Salicylate-Sodium Action Pathway2967
Salicylic Acid Action Pathway2967
Acetaminophen Action Pathway2967
Eicosanoid metabolism via cyclooxygenases (COX)137
Arachidonic acid (AA, ARA) oxylipin metabolism076
Eicosanoid synthesis026
Arachidonic acid metabolism pathway011
Arachidonic acid metabolism via COX (Cyclooxygenase) pathway035

Protein Targets (3)

Potency Measurements

ProteinTaxonomyMeasurementAverage (µ)Min (ref.)Avg (ref.)Max (ref.)Bioassay(s)
Microtubule-associated protein tauHomo sapiens (human)Potency35.48130.180013.557439.8107AID1460
vitamin D3 receptor isoform VDRAHomo sapiens (human)Potency33.55210.354828.065989.1251AID504847
[prepared from compound, protein, and bioassay information from National Library of Medicine (NLM), extracted Dec-2023]

Inhibition Measurements

ProteinTaxonomyMeasurementAverageMin (ref.)Avg (ref.)Max (ref.)Bioassay(s)
Ubiquitin carboxyl-terminal hydrolase isozyme L3Homo sapiens (human)IC50 (µMol)10.00000.05003.908310.0000AID1871601
[prepared from compound, protein, and bioassay information from National Library of Medicine (NLM), extracted Dec-2023]

Biological Processes (5)

Processvia Protein(s)Taxonomy
ubiquitin-dependent protein catabolic processUbiquitin carboxyl-terminal hydrolase isozyme L3Homo sapiens (human)
protein ubiquitinationUbiquitin carboxyl-terminal hydrolase isozyme L3Homo sapiens (human)
protein deubiquitinationUbiquitin carboxyl-terminal hydrolase isozyme L3Homo sapiens (human)
protein catabolic processUbiquitin carboxyl-terminal hydrolase isozyme L3Homo sapiens (human)
post-translational protein modificationUbiquitin carboxyl-terminal hydrolase isozyme L3Homo sapiens (human)
[Information is prepared from geneontology information from the June-17-2024 release]

Molecular Functions (5)

Processvia Protein(s)Taxonomy
cysteine-type deubiquitinase activityUbiquitin carboxyl-terminal hydrolase isozyme L3Homo sapiens (human)
protein bindingUbiquitin carboxyl-terminal hydrolase isozyme L3Homo sapiens (human)
peptidase activityUbiquitin carboxyl-terminal hydrolase isozyme L3Homo sapiens (human)
deNEDDylase activityUbiquitin carboxyl-terminal hydrolase isozyme L3Homo sapiens (human)
ubiquitin bindingUbiquitin carboxyl-terminal hydrolase isozyme L3Homo sapiens (human)
[Information is prepared from geneontology information from the June-17-2024 release]

Ceullar Components (3)

Processvia Protein(s)Taxonomy
nucleoplasmUbiquitin carboxyl-terminal hydrolase isozyme L3Homo sapiens (human)
cytosolUbiquitin carboxyl-terminal hydrolase isozyme L3Homo sapiens (human)
cytoplasmUbiquitin carboxyl-terminal hydrolase isozyme L3Homo sapiens (human)
[Information is prepared from geneontology information from the June-17-2024 release]

Bioassays (8)

Assay IDTitleYearJournalArticle
AID1347154Primary screen GU AMC qHTS for Zika virus inhibitors2020Proceedings of the National Academy of Sciences of the United States of America, 12-08, Volume: 117, Issue:49
Therapeutic candidates for the Zika virus identified by a high-throughput screen for Zika protease inhibitors.
AID1508630Primary qHTS for small molecule stabilizers of the endoplasmic reticulum resident proteome: Secreted ER Calcium Modulated Protein (SERCaMP) assay2021Cell reports, 04-27, Volume: 35, Issue:4
A target-agnostic screen identifies approved drugs to stabilize the endoplasmic reticulum-resident proteome.
AID588519A screen for compounds that inhibit viral RNA polymerase binding and polymerization activities2011Antiviral research, Sep, Volume: 91, Issue:3
High-throughput screening identification of poliovirus RNA-dependent RNA polymerase inhibitors.
AID1346326Human DP2 receptor (Prostanoid receptors)2002British journal of pharmacology, Dec, Volume: 137, Issue:8
Molecular pharmacology of the human prostaglandin D2 receptor, CRTH2.
AID1346401Mouse DP2 receptor (Prostanoid receptors)2003The Journal of pharmacology and experimental therapeutics, Aug, Volume: 306, Issue:2
Expression and molecular pharmacology of the mouse CRTH2 receptor.
AID1346377Human DP1 receptor (Prostanoid receptors)1998British journal of pharmacology, Apr, Volume: 123, Issue:7
Characterization of the recombinant human prostanoid DP receptor and identification of L-644,698, a novel selective DP agonist.
AID1871601Inhibition of UCHL3 (unknown origin) using Ub-AMC as substrate preincubated for 30 mins followed by substrate addition by fluorescence assay2022European journal of medicinal chemistry, Jan-05, Volume: 227UCH-L3 structure and function: Insights about a promising drug target.
AID540299A screen for compounds that inhibit the MenB enzyme of Mycobacterium tuberculosis2010Bioorganic & medicinal chemistry letters, Nov-01, Volume: 20, Issue:21
Synthesis and SAR studies of 1,4-benzoxazine MenB inhibitors: novel antibacterial agents against Mycobacterium tuberculosis.
[information is prepared from bioassay data collected from National Library of Medicine (NLM), extracted Dec-2023]

Research

Studies (281)

TimeframeStudies, This Drug (%)All Drugs %
pre-199018 (6.41)18.7374
1990's60 (21.35)18.2507
2000's136 (48.40)29.6817
2010's54 (19.22)24.3611
2020's13 (4.63)2.80
[information is prepared from research data collected from National Library of Medicine (NLM), extracted Dec-2023]

Market Indicators

Research Demand Index: 9.29

According to the monthly volume, diversity, and competition of internet searches for this compound, as well the volume and growth of publications, there is estimated to be weak demand-to-supply ratio for research on this compound.

MetricThis Compound (vs All)
Research Demand Index9.29 (24.57)
Research Supply Index5.65 (2.92)
Research Growth Index4.95 (4.65)
Search Engine Demand Index0.00 (26.88)
Search Engine Supply Index0.00 (0.95)

This Compound (9.29)

All Compounds (24.57)

Study Types

Publication TypeThis drug (%)All Drugs (%)
Trials1 (0.35%)5.53%
Reviews21 (7.42%)6.00%
Case Studies0 (0.00%)4.05%
Observational0 (0.00%)0.25%
Other261 (92.23%)84.16%
[information is prepared from research data collected from National Library of Medicine (NLM), extracted Dec-2023]