Page last updated: 2024-11-13

lly-507

Description Research Excerpts Clinical Trials Roles Classes Pathways Study Profile Bioassays Related Drugs Related Conditions Protein Interactions Research Growth Market Indicators

Description

LLY-507: inhibits methyltransferase SMYD2; structure in first source [Medical Subject Headings (MeSH), National Library of Medicine, extracted Dec-2023]

LLY-507 : A secondary carboxamide resulting from the formal condensation of the carboxy group of 5-cyano-2'-{4-[2-(3-methyl-1H-indol-1-yl)ethyl]piperazin-1-yl}[biphenyl]-3-carboxylic acid with the amino group of 3-(pyrrolidin-1-yl)propan-1-amine. It is a potent and selective inhibitor of SMYD2 and inhibits the ability of SMYD2 to methylate p53. It serves as a valuable chemical probe to aid in the dissection of SMYD2 function in cancer and other biological processes. [Chemical Entities of Biological Interest (ChEBI), Hastings J, Owen G, Dekker A, Ennis M, Kale N, Muthukrishnan V, Turner S, Swainston N, Mendes P, Steinbeck C. (2016). ChEBI in 2016: Improved services and an expanding collection of metabolites. Nucleic Acids Res]

Cross-References

ID SourceID
PubMed CID91623361
CHEMBL ID3414623
SCHEMBL ID19760400
MeSH IDM000608800

Synonyms (33)

Synonym
chembl3414623 ,
bdbm50075102
S7575
3-cyano-5-(2-{4-[2-(3-methyl-1h-indol-1-yl)ethyl]piperazin-1-yl}phenyl)-n-[3-(pyrrolidin-1-yl)propyl]benzamide
lly-507
gtpl8239
CS-5126
HY-19313
5-cyano-2'-{4-[2-(3-methyl-1h-indol-1-yl)ethyl]piperazin-1-yl}-n-[3-(pyrrolidin-1-yl)propyl]biphenyl-3-carboxamide
3uj ,
AC-29059
J-690247
EX-A899
lly 507
1793053-37-8
3-cyano-5-[2-[4-[2-(3-methyl-1h-indol-1-yl)ethyl]piperazin-1-yl]phenyl]-n-[3-(pyrrolidin-1-yl)propyl]benzamide
lly-507, >=97% (hplc)
lly507
AKOS027470175
5-cyano-2'-(4-(2-(3-methyl-1h-indol-1-yl)ethyl)piperazin-1-yl)-n-(3-(pyrrolidin-1-yl)propyl)-[1,1'-biphenyl]-3-carboxamide
mfcd28902312
NCGC00356417-04
NCGC00356417-06
3-cyano-5-[2-[4-[2-(3-methylindol-1-yl)ethyl]piperazin-1-yl]phenyl]-n-(3-pyrrolidin-1-ylpropyl)benzamide
BCP17114
Q27081031
SCHEMBL19760400
AMY18779
[1,1'-biphenyl]-3-carboxamide, 5-cyano-2'-[4-[2-(3-methyl-1h-indol-1-yl)ethyl]-1-piperazinyl]-n-[3-(1-pyrrolidinyl)propyl]-
CCG-270110
A858143
AS-77771
c36h42n6o

Research Excerpts

Compound-Compound Interactions

ExcerptReferenceRelevance
" These findings suggest that LLY-507 can be used alone or in combination with a PARP inhibitor for the treatment of patients with HGSOC."( Histone methyltransferase SMYD2 selective inhibitor LLY-507 in combination with poly ADP ribose polymerase inhibitor has therapeutic potential against high-grade serous ovarian carcinomas.
Asada, K; Fujii, T; Hamamoto, R; Honjoh, H; Kaneko, S; Kawata, Y; Kojima, M; Komatsu, M; Kukita, A; Matsumoto, Y; Miyasaka, A; Nagasaka, K; Oda, K; Oki, S; Osuga, Y; Sato, M; Sone, K; Taguchi, A; Tanikawa, M; Wada, M; Wada-Hiraike, O, 2019
)
1.06

Bioavailability

ExcerptReferenceRelevance
"Cell membrane permeability is an important determinant for oral absorption and bioavailability of a drug molecule."( Highly predictive and interpretable models for PAMPA permeability.
Jadhav, A; Kerns, E; Nguyen, K; Shah, P; Sun, H; Xu, X; Yan, Z; Yu, KR, 2017
)
0.46
"The ATP-binding cassette transporter P-glycoprotein (P-gp) is known to limit both brain penetration and oral bioavailability of many chemotherapy drugs."( A High-Throughput Screen of a Library of Therapeutics Identifies Cytotoxic Substrates of P-glycoprotein.
Ambudkar, SV; Brimacombe, KR; Chen, L; Gottesman, MM; Guha, R; Hall, MD; Klumpp-Thomas, C; Lee, OW; Lee, TD; Lusvarghi, S; Robey, RW; Shen, M; Tebase, BG, 2019
)
0.51
[information is derived through text-mining from research data collected from National Library of Medicine (NLM), extracted Dec-2023]

Protein Targets (3)

Potency Measurements

ProteinTaxonomyMeasurementAverage (µ)Min (ref.)Avg (ref.)Max (ref.)Bioassay(s)
PPM1D proteinHomo sapiens (human)Potency20.82120.00529.466132.9993AID1347411
Interferon betaHomo sapiens (human)Potency20.82120.00339.158239.8107AID1347411
[prepared from compound, protein, and bioassay information from National Library of Medicine (NLM), extracted Dec-2023]

Inhibition Measurements

ProteinTaxonomyMeasurementAverageMin (ref.)Avg (ref.)Max (ref.)Bioassay(s)
N-lysine methyltransferase SMYD2Homo sapiens (human)IC50 (µMol)0.31350.01500.769210.0000AID1199201; AID1199203; AID1234090; AID1308097; AID1308098; AID1308100; AID1308102; AID1602199; AID1698453; AID1863577; AID1863578; AID1863579; AID1863580; AID1887903
[prepared from compound, protein, and bioassay information from National Library of Medicine (NLM), extracted Dec-2023]

Biological Processes (38)

Processvia Protein(s)Taxonomy
cell surface receptor signaling pathway via JAK-STATInterferon betaHomo sapiens (human)
response to exogenous dsRNAInterferon betaHomo sapiens (human)
B cell activation involved in immune responseInterferon betaHomo sapiens (human)
cell surface receptor signaling pathwayInterferon betaHomo sapiens (human)
cell surface receptor signaling pathway via JAK-STATInterferon betaHomo sapiens (human)
response to virusInterferon betaHomo sapiens (human)
positive regulation of autophagyInterferon betaHomo sapiens (human)
cytokine-mediated signaling pathwayInterferon betaHomo sapiens (human)
natural killer cell activationInterferon betaHomo sapiens (human)
positive regulation of peptidyl-serine phosphorylation of STAT proteinInterferon betaHomo sapiens (human)
cellular response to interferon-betaInterferon betaHomo sapiens (human)
B cell proliferationInterferon betaHomo sapiens (human)
negative regulation of viral genome replicationInterferon betaHomo sapiens (human)
innate immune responseInterferon betaHomo sapiens (human)
positive regulation of innate immune responseInterferon betaHomo sapiens (human)
regulation of MHC class I biosynthetic processInterferon betaHomo sapiens (human)
negative regulation of T cell differentiationInterferon betaHomo sapiens (human)
positive regulation of transcription by RNA polymerase IIInterferon betaHomo sapiens (human)
defense response to virusInterferon betaHomo sapiens (human)
type I interferon-mediated signaling pathwayInterferon betaHomo sapiens (human)
neuron cellular homeostasisInterferon betaHomo sapiens (human)
cellular response to exogenous dsRNAInterferon betaHomo sapiens (human)
cellular response to virusInterferon betaHomo sapiens (human)
negative regulation of Lewy body formationInterferon betaHomo sapiens (human)
negative regulation of T-helper 2 cell cytokine productionInterferon betaHomo sapiens (human)
positive regulation of apoptotic signaling pathwayInterferon betaHomo sapiens (human)
response to exogenous dsRNAInterferon betaHomo sapiens (human)
B cell differentiationInterferon betaHomo sapiens (human)
natural killer cell activation involved in immune responseInterferon betaHomo sapiens (human)
adaptive immune responseInterferon betaHomo sapiens (human)
T cell activation involved in immune responseInterferon betaHomo sapiens (human)
humoral immune responseInterferon betaHomo sapiens (human)
negative regulation of transcription by RNA polymerase IIN-lysine methyltransferase SMYD2Homo sapiens (human)
chromatin remodelingN-lysine methyltransferase SMYD2Homo sapiens (human)
heart developmentN-lysine methyltransferase SMYD2Homo sapiens (human)
negative regulation of cell population proliferationN-lysine methyltransferase SMYD2Homo sapiens (human)
peptidyl-lysine monomethylationN-lysine methyltransferase SMYD2Homo sapiens (human)
peptidyl-lysine dimethylationN-lysine methyltransferase SMYD2Homo sapiens (human)
regulation of DNA damage response, signal transduction by p53 class mediatorN-lysine methyltransferase SMYD2Homo sapiens (human)
regulation of signal transduction by p53 class mediatorN-lysine methyltransferase SMYD2Homo sapiens (human)
[Information is prepared from geneontology information from the June-17-2024 release]

Molecular Functions (13)

Processvia Protein(s)Taxonomy
cytokine activityInterferon betaHomo sapiens (human)
cytokine receptor bindingInterferon betaHomo sapiens (human)
type I interferon receptor bindingInterferon betaHomo sapiens (human)
protein bindingInterferon betaHomo sapiens (human)
chloramphenicol O-acetyltransferase activityInterferon betaHomo sapiens (human)
RNA polymerase II complex bindingN-lysine methyltransferase SMYD2Homo sapiens (human)
p53 bindingN-lysine methyltransferase SMYD2Homo sapiens (human)
protein bindingN-lysine methyltransferase SMYD2Homo sapiens (human)
lysine N-methyltransferase activityN-lysine methyltransferase SMYD2Homo sapiens (human)
protein-lysine N-methyltransferase activityN-lysine methyltransferase SMYD2Homo sapiens (human)
metal ion bindingN-lysine methyltransferase SMYD2Homo sapiens (human)
histone H3K36 methyltransferase activityN-lysine methyltransferase SMYD2Homo sapiens (human)
histone H3 methyltransferase activityN-lysine methyltransferase SMYD2Homo sapiens (human)
histone H3K4 trimethyltransferase activityN-lysine methyltransferase SMYD2Homo sapiens (human)
[Information is prepared from geneontology information from the June-17-2024 release]

Ceullar Components (6)

Processvia Protein(s)Taxonomy
extracellular spaceInterferon betaHomo sapiens (human)
extracellular regionInterferon betaHomo sapiens (human)
nucleusN-lysine methyltransferase SMYD2Homo sapiens (human)
nucleoplasmN-lysine methyltransferase SMYD2Homo sapiens (human)
cytoplasmN-lysine methyltransferase SMYD2Homo sapiens (human)
cytosolN-lysine methyltransferase SMYD2Homo sapiens (human)
nucleusN-lysine methyltransferase SMYD2Homo sapiens (human)
[Information is prepared from geneontology information from the June-17-2024 release]

Bioassays (33)

Assay IDTitleYearJournalArticle
AID1863581Antitumor activity against human KYSE-150 cells assessed as inhibition of cell proliferation incubated for 3 to 7 days by CellTiter-Glo assay2022Journal of medicinal chemistry, 08-11, Volume: 65, Issue:15
Protein Lysine Methyltransferase SMYD2: A Promising Small Molecule Target for Cancer Therapy.
AID1863582Antitumor activity against human KYSE-270 cells assessed as inhibition of cell proliferation incubated for 3 to 7 days by CellTiter-Glo assay2022Journal of medicinal chemistry, 08-11, Volume: 65, Issue:15
Protein Lysine Methyltransferase SMYD2: A Promising Small Molecule Target for Cancer Therapy.
AID1698454Antiproliferative activity against human AGS cells2020Bioorganic & medicinal chemistry letters, 11-15, Volume: 30, Issue:22
Synthesis and structure-activity relationship studies of LLY-507 analogues as SMYD2 inhibitors.
AID1698452Binding affinity to SMYD2 (unknown origin) assessed as change in melting temperature at compound to protein molar ratio of 5:1 ratio by fluorescence based thermal shift assay2020Bioorganic & medicinal chemistry letters, 11-15, Volume: 30, Issue:22
Synthesis and structure-activity relationship studies of LLY-507 analogues as SMYD2 inhibitors.
AID1863583Antitumor activity against human HCC cells assessed as inhibition of cell proliferation incubated for 3 to 7 days by CellTiter-Glo assay2022Journal of medicinal chemistry, 08-11, Volume: 65, Issue:15
Protein Lysine Methyltransferase SMYD2: A Promising Small Molecule Target for Cancer Therapy.
AID1863577Inhibition of SMYD2 (unknown origin) using [H3]-SAM and p53 (361 to 380 residues) as peptide substrate incubated for 1 hr by scintillation proximity assay2022Journal of medicinal chemistry, 08-11, Volume: 65, Issue:15
Protein Lysine Methyltransferase SMYD2: A Promising Small Molecule Target for Cancer Therapy.
AID1698451Binding affinity to SMYD2 (unknown origin) assessed as change in melting temperature at compound to protein molar ratio of 10:1 by fluorescence based thermal shift assay2020Bioorganic & medicinal chemistry letters, 11-15, Volume: 30, Issue:22
Synthesis and structure-activity relationship studies of LLY-507 analogues as SMYD2 inhibitors.
AID1698450Binding affinity to SMYD2 (unknown origin) assessed as change in melting temperature at compound to protein molar ratio of 20:1 by fluorescence based thermal shift assay2020Bioorganic & medicinal chemistry letters, 11-15, Volume: 30, Issue:22
Synthesis and structure-activity relationship studies of LLY-507 analogues as SMYD2 inhibitors.
AID1863580Inhibition of FLAG-tagged SMYD2 (unknown origin) expressed in human KYSE-150 cells mediated intracellular P53 methylation at lysine 370 incubated for 15 hrs using p53 as substrate by ELISA2022Journal of medicinal chemistry, 08-11, Volume: 65, Issue:15
Protein Lysine Methyltransferase SMYD2: A Promising Small Molecule Target for Cancer Therapy.
AID1602199Inhibition of SMYD2 (unknown origin) using [3H]-p53 (361 to 380 residues) as substrate after 1 hr in presence of [3H]-SAM by scintillation proximity assay2019European journal of medicinal chemistry, Mar-15, Volume: 166Histone methyl transferases: A class of epigenetic opportunities to counter uncontrolled cell proliferation.
AID1698453Inhibition of SMYD2 (unknown origin) transfected in human U2OS cells assessed as inhibition of methylation of monomethyl p53 peptide incubated for 24 hrs by immunofluorescence assay2020Bioorganic & medicinal chemistry letters, 11-15, Volume: 30, Issue:22
Synthesis and structure-activity relationship studies of LLY-507 analogues as SMYD2 inhibitors.
AID1863578Inhibition of SMYD2 (unknown origin) using [H3]-SAM and histone H4 as substrate incubated for 1 hr by scintillation proximity assay2022Journal of medicinal chemistry, 08-11, Volume: 65, Issue:15
Protein Lysine Methyltransferase SMYD2: A Promising Small Molecule Target for Cancer Therapy.
AID1863579Inhibition of FLAG-tagged SMYD2 (unknown origin) expressed in human U2OS cells mediated intracellular P53 methylation incubated for 15 hrs using p53 as substrate by ELISA2022Journal of medicinal chemistry, 08-11, Volume: 65, Issue:15
Protein Lysine Methyltransferase SMYD2: A Promising Small Molecule Target for Cancer Therapy.
AID1308097Inhibition of full length 6xHis-tagged SMYD2 (unknown origin) expressed in Escherichia coli using Btn-Ahx GSRAHSSHLKSKKGQSTSRH-amide as substrate after 30 mins in presence 3H-SAM of by scintillation proximity assay2016Journal of medicinal chemistry, 05-26, Volume: 59, Issue:10
Discovery and Characterization of a Highly Potent and Selective Aminopyrazoline-Based in Vivo Probe (BAY-598) for the Protein Lysine Methyltransferase SMYD2.
AID1308100Inhibition of SMYD2 (unknown origin) using H4 as substrate after 2hrs in presence 3H-SAM of by scintillation proximity assay2016Journal of medicinal chemistry, 05-26, Volume: 59, Issue:10
Discovery and Characterization of a Highly Potent and Selective Aminopyrazoline-Based in Vivo Probe (BAY-598) for the Protein Lysine Methyltransferase SMYD2.
AID1234090Inhibition of SMYD2 (unknown origin) using p53 (361 to 380) as substrate assessed as incorporation of tritium labeled methyl group from [3H]-SAM to p53 peptide substrate after 1 hr by scintillation proximity assay2015ACS medicinal chemistry letters, Jun-11, Volume: 6, Issue:6
Discovery of A-893, A New Cell-Active Benzoxazinone Inhibitor of Lysine Methyltransferase SMYD2.
AID1308098Inhibition of SMYD2 (unknown origin) expressed in Escherichia coli BL21 (DE3) using Biotinaminohexanoyl-GSRAHSSHLKSKKGQSTSRH as substrate after 75 mins by scintillation proximity assay2016Journal of medicinal chemistry, 05-26, Volume: 59, Issue:10
Discovery and Characterization of a Highly Potent and Selective Aminopyrazoline-Based in Vivo Probe (BAY-598) for the Protein Lysine Methyltransferase SMYD2.
AID1308102Inhibition of SMYD2 (unknown origin) expressed in human U2OS cells assessed as reduction in p53 methylation by Western blot analysis2016Journal of medicinal chemistry, 05-26, Volume: 59, Issue:10
Discovery and Characterization of a Highly Potent and Selective Aminopyrazoline-Based in Vivo Probe (BAY-598) for the Protein Lysine Methyltransferase SMYD2.
AID1698455Antiproliferative activity against human NCI-N87 cells2020Bioorganic & medicinal chemistry letters, 11-15, Volume: 30, Issue:22
Synthesis and structure-activity relationship studies of LLY-507 analogues as SMYD2 inhibitors.
AID1199201Inhibition of SMYD2 (unknown origin)2015Journal of medicinal chemistry, Feb-26, Volume: 58, Issue:4
Selective inhibitors of protein methyltransferases.
AID1199203Inhibition of SMYD2 in human KYSE-150 cells assessed as reduction of monomethylation of p53 K370 by sandwich ELISA method2015Journal of medicinal chemistry, Feb-26, Volume: 58, Issue:4
Selective inhibitors of protein methyltransferases.
AID1863584Antitumor activity against human BC cells assessed as inhibition of cell proliferation incubated for 3 to 7 days by CellTiter-Glo assay2022Journal of medicinal chemistry, 08-11, Volume: 65, Issue:15
Protein Lysine Methyltransferase SMYD2: A Promising Small Molecule Target for Cancer Therapy.
AID1887903Inhibition of SMYD2 (unknown origin) using 3H-SAM as substrate incubated for 1 hr by filter binding method2022European journal of medicinal chemistry, Jan-05, Volume: 227Positioning of an unprecedented 1,5-oxaza spiroquinone scaffold into SMYD2 inhibitors in epigenetic space.
AID1346987P-glycoprotein substrates identified in KB-8-5-11 adenocarcinoma cell line, qHTS therapeutic library screen2019Molecular pharmacology, 11, Volume: 96, Issue:5
A High-Throughput Screen of a Library of Therapeutics Identifies Cytotoxic Substrates of P-glycoprotein.
AID1296008Cytotoxic Profiling of Annotated Libraries Using Quantitative High-Throughput Screening2020SLAS discovery : advancing life sciences R & D, 01, Volume: 25, Issue:1
Cytotoxic Profiling of Annotated and Diverse Chemical Libraries Using Quantitative High-Throughput Screening.
AID1347160Primary screen NINDS Rhodamine qHTS for Zika virus inhibitors2020Proceedings of the National Academy of Sciences of the United States of America, 12-08, Volume: 117, Issue:49
Therapeutic candidates for the Zika virus identified by a high-throughput screen for Zika protease inhibitors.
AID1508612NCATS Parallel Artificial Membrane Permeability Assay (PAMPA) Profiling2017Bioorganic & medicinal chemistry, 02-01, Volume: 25, Issue:3
Highly predictive and interpretable models for PAMPA permeability.
AID1508591NCATS Rat Liver Microsome Stability Profiling2020Scientific reports, 11-26, Volume: 10, Issue:1
Retrospective assessment of rat liver microsomal stability at NCATS: data and QSAR models.
AID1346986P-glycoprotein substrates identified in KB-3-1 adenocarcinoma cell line, qHTS therapeutic library screen2019Molecular pharmacology, 11, Volume: 96, Issue:5
A High-Throughput Screen of a Library of Therapeutics Identifies Cytotoxic Substrates of P-glycoprotein.
AID1347159Primary screen GU Rhodamine qHTS for Zika virus inhibitors: Unlinked NS2B-NS3 protease assay2020Proceedings of the National Academy of Sciences of the United States of America, 12-08, Volume: 117, Issue:49
Therapeutic candidates for the Zika virus identified by a high-throughput screen for Zika protease inhibitors.
AID1645848NCATS Kinetic Aqueous Solubility Profiling2019Bioorganic & medicinal chemistry, 07-15, Volume: 27, Issue:14
Predictive models of aqueous solubility of organic compounds built on A large dataset of high integrity.
AID1347412qHTS assay to identify inhibitors of the type 1 interferon - major histocompatibility complex class I in skeletal muscle: Counter screen cell viability and HiBit confirmation2020ACS chemical biology, 07-17, Volume: 15, Issue:7
High-Throughput Screening to Identify Inhibitors of the Type I Interferon-Major Histocompatibility Complex Class I Pathway in Skeletal Muscle.
AID1347411qHTS to identify inhibitors of the type 1 interferon - major histocompatibility complex class I in skeletal muscle: primary screen against the NCATS Mechanism Interrogation Plate v5.0 (MIPE) Libary2020ACS chemical biology, 07-17, Volume: 15, Issue:7
High-Throughput Screening to Identify Inhibitors of the Type I Interferon-Major Histocompatibility Complex Class I Pathway in Skeletal Muscle.
[information is prepared from bioassay data collected from National Library of Medicine (NLM), extracted Dec-2023]

Research

Studies (17)

TimeframeStudies, This Drug (%)All Drugs %
pre-19900 (0.00)18.7374
1990's0 (0.00)18.2507
2000's0 (0.00)29.6817
2010's10 (58.82)24.3611
2020's7 (41.18)2.80
[information is prepared from research data collected from National Library of Medicine (NLM), extracted Dec-2023]

Market Indicators

Research Demand Index: 19.29

According to the monthly volume, diversity, and competition of internet searches for this compound, as well the volume and growth of publications, there is estimated to be moderate demand-to-supply ratio for research on this compound.

MetricThis Compound (vs All)
Research Demand Index19.29 (24.57)
Research Supply Index2.89 (2.92)
Research Growth Index4.55 (4.65)
Search Engine Demand Index15.26 (26.88)
Search Engine Supply Index2.00 (0.95)

This Compound (19.29)

All Compounds (24.57)

Study Types

Publication TypeThis drug (%)All Drugs (%)
Trials0 (0.00%)5.53%
Reviews2 (11.76%)6.00%
Case Studies0 (0.00%)4.05%
Observational0 (0.00%)0.25%
Other15 (88.24%)84.16%
[information is prepared from research data collected from National Library of Medicine (NLM), extracted Dec-2023]