Page last updated: 2024-11-12

anticodon

Description Research Excerpts Clinical Trials Roles Classes Pathways Study Profile Bioassays Related Drugs Related Conditions Protein Interactions Research Growth Market Indicators

Description

Anticodon: The sequential set of three nucleotides in TRANSFER RNA that interacts with its complement in MESSENGER RNA, the CODON, during translation in the ribosome. [Medical Subject Headings (MeSH), National Library of Medicine, extracted Dec-2023]

FloraRankFlora DefinitionFamilyFamily Definition
CodongenusA set of three nucleotides in a protein coding sequence that specifies individual amino acids or a termination signal (CODON, TERMINATOR). Most codons are universal, but some organisms do not produce the transfer RNAs (RNA, TRANSFER) complementary to all codons. These codons are referred to as unassigned codons (CODONS, NONSENSE).[MeSH]BoraginaceaeThe Borage plant family is in the class Magnoliopsida, subclass Asteridae, order Lamiales. It is characterized by hairy foliage, usually alternate and simple; flowers are funnel-shaped or tubular. Some of the species contain PYRROLIZIDINE ALKALOIDS.[MeSH]

Cross-References

ID SourceID
PubMed CID16133935
MeSH IDM0001381

Synonyms (5)

Synonym
phosphorothioate oligonucleotide cag act ttt aat ctg
anticodon
198155-94-1
antisense to anticodon of primer trna(lys3)
5'-c sa sg sa sc st st st st sa sa st sc st sg-3'

Research Excerpts

Overview

The anticodon sequence is a major recognition element for most aminoacyl-tRNA synthetases. It acts as a three-dimensional hinge permitting rotation of the tRNA about a relatively fixed codon-anticodon pair.

ExcerptReferenceRelevance
"The anticodon sequence is a major recognition element for most aminoacyl-tRNA synthetases. "( Transfer RNA identity change in anticodon variants of E. coli tRNA(Phe) in vivo.
Kim, HS; Kim, IY; Lee, SY; Söll, D, 2000
)
1.15
"The anticodon loop acts as a three-dimensional hinge permitting rotation of the tRNA about a relatively fixed codon-anticodon pair."( The transorientation hypothesis for codon recognition during protein synthesis.
Lake, JA; Simonson, AB, 2002
)
0.8

Toxicity

ExcerptReferenceRelevance
" This enzyme is toxic when heterologously overexpressed in Escherichia coli."( The nondiscriminating aspartyl-tRNA synthetase from Helicobacter pylori: anticodon-binding domain mutations that impact tRNA specificity and heterologous toxicity.
Chuawong, P; Hendrickson, TL, 2006
)
0.57

Bioavailability

ExcerptReferenceRelevance
" melanogaster reflect bioavailability of the precursor queuine, which eukaryotes scavenge from the tRNAs of bacteria and absorb in the gut."( A nutrient-driven tRNA modification alters translational fidelity and genome-wide protein coding across an animal genus.
Aquadro, CF; Drummond, DA; DuMont, VL; Pan, T; Wallace, EW; Zaborske, JM, 2014
)
0.4

Dosage Studied

ExcerptRelevanceReference
" Downregulation of a GAL1-TRM112 allele protects against zymocin whereas LYS9, TRM11 and MTQ2 are dosage suppressors of zymocin."( tRNA and protein methylase complexes mediate zymocin toxicity in yeast.
Bär, C; Jablonowski, D; Schaffrath, R; Studte, P; Tuite, MF; von der Haar, T; Zink, S, 2008
)
0.35
[information is derived through text-mining from research data collected from National Library of Medicine (NLM), extracted Dec-2023]

Research

Studies (1,961)

TimeframeStudies, This Drug (%)All Drugs %
pre-1990565 (28.81)18.7374
1990's478 (24.38)18.2507
2000's425 (21.67)29.6817
2010's359 (18.31)24.3611
2020's134 (6.83)2.80
[information is prepared from research data collected from National Library of Medicine (NLM), extracted Dec-2023]

Market Indicators

Research Demand Index: 76.81

According to the monthly volume, diversity, and competition of internet searches for this compound, as well the volume and growth of publications, there is estimated to be very strong demand-to-supply ratio for research on this compound.

MetricThis Compound (vs All)
Research Demand Index76.81 (24.57)
Research Supply Index7.61 (2.92)
Research Growth Index4.53 (4.65)
Search Engine Demand Index138.36 (26.88)
Search Engine Supply Index2.00 (0.95)

This Compound (76.81)

All Compounds (24.57)

Study Types

Publication TypeThis drug (%)All Drugs (%)
Trials0 (0.00%)5.53%
Reviews191 (9.45%)6.00%
Case Studies11 (0.54%)4.05%
Observational0 (0.00%)0.25%
Other1,820 (90.01%)84.16%
[information is prepared from research data collected from National Library of Medicine (NLM), extracted Dec-2023]