Page last updated: 2024-11-06

stachyose

Description Research Excerpts Clinical Trials Roles Classes Pathways Study Profile Bioassays Related Drugs Related Conditions Protein Interactions Research Growth

Description

stachyose: RN given refers to parent cpd [Medical Subject Headings (MeSH), National Library of Medicine, extracted Dec-2023]

stachyose : A tetrasaccharide consisting of sucrose having an alpha-D-galactosyl-(1->6)-alpha-D-galactosyl moiety attached at the 6-position of the glucose. [Chemical Entities of Biological Interest (ChEBI), Hastings J, Owen G, Dekker A, Ennis M, Kale N, Muthukrishnan V, Turner S, Swainston N, Mendes P, Steinbeck C. (2016). ChEBI in 2016: Improved services and an expanding collection of metabolites. Nucleic Acids Res]

Cross-References

ID SourceID
PubMed CID439531
CHEMBL ID1625803
CHEBI ID17164
SCHEMBL ID32922
MeSH IDM0047401
PubMed CID24981346
CHEMBL ID1592729
MeSH IDM0047401

Synonyms (51)

Synonym
o-alpha-d-galactopyranosyl-(1->6)o-alpha-d-galactopyranosyl-(1->6)o-alpha-d-galactopyranosyl-beta-d-fructofuranoside
beta-d-fructofuranosyl alpha-d-galactopyranosyl-(1->6)-alpha-d-galactopyranosyl-(1->6)-alpha-d-glucopyranoside
CHEBI:17164 ,
alpha-d-galp-(1->6)-alpha-d-galp-(1->6)-alpha-d-glcp-(1<->2)-beta-d-fruf
stachyose hydrate from stachys tuberifera
stachyose
C01613 ,
(2r,3r,4s,5s,6r)-2-[[(2r,3s,4s,5r,6r)-6-[(2r,3r,4s,5r,6r)-6-[(2s,3s,4r,5s)-3,4-dihydroxy-2,5-bis(hydroxymethyl)oxolan-2-yl]oxy-4,5-dihydroxy-2-(hydroxymethyl)oxan-3-yl]oxy-3,4,5-trihydroxy-oxan-2-yl]methoxy]-6-(hydroxymethyl)oxane-3,4,5-triol
alpha-d-galp-(1->6)-alpha-d-galp-(1->6)-alpha-d-glcp-(1->2)-beta-d-fruf
BMSE000240
lupeose
manneotetrose
beta-d-fructofuranosyl o-alpha-d-galactopyranosyl-(1-6)-o-alpha-d-galactopyranosyl-(1-6)-alpha-d-glucopyranoside
S0397
NCGC00246978-01
einecs 207-427-3
unii-25vx64653n
alpha-d-glucopyranoside, beta-d-fructofuranosyl o-alpha-d-galactopyranosyl-(1->6)-o-alpha-d-galactopyranosyl-(1->6)-
AKOS016009597
EPITOPE ID:150068
SCHEMBL32922
d-stachyose
CHEMBL1625803
mfcd00006631
(2s,3r,4s,5r,6r)-2-{[(2r,3r,4s,5r,6s)-6-{[(2r,3s,4s,5r,6r)-6-{[(2s,3s,4s,5r)-3,4-dihydroxy-2,5-bis(hydroxymethyl)oxolan-2-yl]oxy}-3,4,5-trihydroxyoxan-2-yl]methoxy}-3,4,5-trihydroxyoxan-2-yl]methoxy}-6-(hydroxymethyl)oxane-3,4,5-triol
beta-d-fructofuranosyl o-alpha-d-galactopyranosyl-(1->6)-o-alpha-d-galactopyranosyl-(1->6)-alpha-d-glucopyranoside
DTXSID30889345 ,
(2r,3r,4s,5s,6r)-2-(((2s,3s,4s,5r)-3,4-dihydroxy-2,5-bis(hydroxymethyl)tetrahydrofuran-2-yl)oxy)-6-((((2s,3r,4s,5r,6r)-3,4,5-trihydroxy-6-((((2s,3r,4s,5r,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)tetrahydro-2h-pyran-2-yl)oxy)methyl)tetrahydro-2h-pyran-2-yl)ox
UQZIYBXSHAGNOE-XNSRJBNMSA-N
Q283435
CS-0138789
(2r,3r,4s,5s,6r)-2-{[(2s,3s,4s,5r)-3,4-dihydroxy-2,5-bis(hydroxymethyl)oxolan-2-yl]oxy}-6-({[(2s,3r,4s,5r,6r)-3,4,5-trihydroxy-6-({[(2s,3r,4s,5r,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}methyl)oxan-2-yl]oxy}methyl)oxane-3,4,5-triol
HY-N7910
F77877
alpha-d-gal-(1->6)-alpha-d-gal-(1->6)-alpha-d-glc-(1->2)-beta-d-fru
beta-d-fructofuranosyl o-alpha-d-galactopyranosyl-(1-6)-o-alpha-d-galactopyranosyl-(1-6)-alpha-d-galactopyranoside
dtxcid601324144
alpha-d-galp-(1->6)-alpha-d-galp-(1->6)-alpha-d-glcp-(12)-beta-d-fruf
(2r,3r,4s,5s,6r)-2-(((2r,3s,4s,5r,6r)-6-((2r,3r,4s,5r,6r)-6-((2s,3s,4r,5s)-3,4-dihydroxy-2,5-bis(hydroxymethyl)oxolan-2-yl)oxy-4,5-dihydroxy-2-(hydroxymethyl)oxan-3-yl)oxy-3,4,5-trihydroxy-oxan-2-yl)methoxy)-6-(hydroxymethyl)oxane-3,4,5-triol
gal(alpha1->6)gal(alpha1->6)glc(alpha1->2beta)fru
MLS001333085
MLS001333086
smr000875265
stachyose hydrate from stachys tuberifera, >=98%
stachyose hydrate from stachys tuberifera, 98%
HMS2236P03
CHEMBL1592729
AC-34785
mfcd00071593
(2s,3r,4s,5r,6r)-2-[[(2r,3r,4s,5r,6s)-6-[[(2r,3s,4s,5r,6r)-6-[(2s,3s,4s,5r)-3,4-dihydroxy-2,5-bis(hydroxymethyl)oxolan-2-yl]oxy-3,4,5-trihydroxyoxan-2-yl]methoxy]-3,4,5-trihydroxyoxan-2-yl]methoxy]-6-(hydroxymethyl)oxane-3,4,5-triol;hydrate
stachyose (hydrate)

Research Excerpts

Toxicity

ExcerptReferenceRelevance
" Moreover, clinical safety assessment showed that DSG at 5 g per day did not cause significant adverse effects in both healthy and constipated volunteers."( Evaluation of clinical safety and beneficial effects of stachyose-enriched α-galacto-oligosaccharides on gut microbiota and bowel function in humans.
Li, T; Lu, X; Yang, X, 2017
)
0.46

Pharmacokinetics

ExcerptReferenceRelevance
" The method was successfully applied to a pharmacokinetic study involving pulmonary administration of micronized Rehmannia glutinosa oligosaccharides (RGOS) to rats."( A LC-MS/MS method for the determination of stachyose in rat plasma and its application to a pharmacokinetic study.
Chen, JL; Liu, L; Qiu, FR; Xu, DS; Xu, GL; Zhou, Y, 2016
)
0.43

Compound-Compound Interactions

Berberine combined with stachyose significantly improved glucose metabolism and reshaped gut microbiota in ZDF rats. It decreased the abundance of pathogenic Desulfovibrionaceae and Proteobacteria compared to berberine alone, providing a novel strategy for treating T2DM.

ExcerptReferenceRelevance
" This study aimed to evaluate whether BBR combined with Sta produced better glycometabolism than BBR alone, and explored the effects on gut microbiota and metabolomics."( Berberine combined with stachyose induces better glycometabolism than berberine alone through modulating gut microbiota and fecal metabolomics in diabetic mice.
Bai, GL; Cao, H; Han, YW; Huan, Y; Lei, L; Li, CN; Li, RC; Liu, MZ; Liu, Q; Liu, SN; Shen, ZF; Sun, SJ; Wang, X; Zhou, T, 2020
)
0.56
" This study aims to evaluate the effect of berberine combined with stachyose on glycolipid metabolism and gut microbiota and to explore the underlying mechanisms in diabetic rats."( Berberine combined with stachyose improves glycometabolism and gut microbiota through regulating colonic microRNA and gene expression in diabetic rats.
Cao, H; Fu, Y; Gao, X; Huan, Y; Ji, W; Lei, L; Li, C; Li, P; Liu, M; Liu, Q; Liu, S; Shen, Z; Sun, S, 2021
)
0.62
"Zucker diabetic fatty (ZDF) rats were orally administered berberine, stachyose and berberine combined with stachyose once daily for 69 days."( Berberine combined with stachyose improves glycometabolism and gut microbiota through regulating colonic microRNA and gene expression in diabetic rats.
Cao, H; Fu, Y; Gao, X; Huan, Y; Ji, W; Lei, L; Li, C; Li, P; Liu, M; Liu, Q; Liu, S; Shen, Z; Sun, S, 2021
)
0.62
"Repeated treatments with berberine alone and combined with stachyose significantly reduced the blood glucose, improved the impaired glucose tolerance, and increased the abundance of beneficial Akkermansiaceae, decreased that of pathogenic Enterobacteriaceae in ZDF rats."( Berberine combined with stachyose improves glycometabolism and gut microbiota through regulating colonic microRNA and gene expression in diabetic rats.
Cao, H; Fu, Y; Gao, X; Huan, Y; Ji, W; Lei, L; Li, C; Li, P; Liu, M; Liu, Q; Liu, S; Shen, Z; Sun, S, 2021
)
0.62
"Berberine combined with stachyose significantly improved glucose metabolism and reshaped gut microbiota in ZDF rats, especially decreased the abundance of pathogenic Desulfovibrionaceae and Proteobacteria compared to berberine alone, providing a novel strategy for treating T2DM."( Berberine combined with stachyose improves glycometabolism and gut microbiota through regulating colonic microRNA and gene expression in diabetic rats.
Cao, H; Fu, Y; Gao, X; Huan, Y; Ji, W; Lei, L; Li, C; Li, P; Liu, M; Liu, Q; Liu, S; Shen, Z; Sun, S, 2021
)
0.62

Bioavailability

The intestinal absorption rate of stachyose is low, the main absorption site is the upper portion of small intestine. A new amphiphilic oligosaccharide derivative was prepared and used to improve the oral bioavailability of lutein.

ExcerptReferenceRelevance
"The intestinal absorption rate of stachyose is low, the main absorption site is the upper portion of small intestine."( [Pharmacokinetic study on absorption of stachyose].
Ruan, J; Zhang, Y; Zheng, N, 2000
)
0.31
" These and other short-chain carbohydrates can also be poorly absorbed in the small intestine (named fermentable oligo-, di- and monosaccharides and polyols; FODMAPs) and may have important implications for the health of the gut."( Quantification of fructans, galacto-oligosacharides and other short-chain carbohydrates in processed grains and cereals.
Barrett, JS; Biesiekierski, JR; Gibson, PR; Liels, K; Muir, JG; Rose, R; Rosella, O; Shepherd, SJ, 2011
)
0.37
" Application of Lactobacillus in the fermentation procedure increased tempeh protein and in vitro protein bioavailability by 18 and 17% respectively."( Effect of controlled lactic acid fermentation on selected bioactive and nutritional parameters of tempeh obtained from unhulled common bean (Phaseolus vulgaris) seeds.
Mickowska, B; Starzyńska-Janiszewska, A; Stodolak, B, 2014
)
0.4
"A new amphiphilic oligosaccharide derivative, based on lutein modification onto the OH position of stachyose with facile and mild esterification, was prepared and used to improve the oral bioavailability of lutein."( Lutein-stachyose (LS) amphiphilic oligosaccharide derivatives improve the oral bioavailability of lutein.
Li, S; Li, Y; Liu, B; Liu, Y; Wang, S; Zhang, X; Zhao, X, 2023
)
0.91

Dosage Studied

ExcerptRelevanceReference
" In this study, the effects of gene dosage and endoplasmic reticulum secretion-associated factors (ERSAs) on the secretory expression of an α-galactosidase gene derived from a Aspergillus oryzae strain were investigated by constructing multicopy expression cassettes and coexpressing the α-galactosidase gene with ERSAs."( Gene dosage and coexpression with endoplasmic reticulum secretion-associated factors improved the secretory expression of α-galactosidase.
Han, ZG; Jiang, XF; Yang, JK; Zhang, JW, 2019
)
0.51
[information is derived through text-mining from research data collected from National Library of Medicine (NLM), extracted Dec-2023]

Roles (2)

RoleDescription
plant metaboliteAny eukaryotic metabolite produced during a metabolic reaction in plants, the kingdom that include flowering plants, conifers and other gymnosperms.
mouse metaboliteAny mammalian metabolite produced during a metabolic reaction in a mouse (Mus musculus).
[role information is derived from Chemical Entities of Biological Interest (ChEBI), Hastings J, Owen G, Dekker A, Ennis M, Kale N, Muthukrishnan V, Turner S, Swainston N, Mendes P, Steinbeck C. (2016). ChEBI in 2016: Improved services and an expanding collection of metabolites. Nucleic Acids Res]

Drug Classes (2)

ClassDescription
tetrasaccharideAn oligosaccharide comprising four monomeric monosaccharide units.
raffinose family oligosaccharideAny oligosaccharide that has a biosynthetic pathway in common with that of raffinose.
[compound class information is derived from Chemical Entities of Biological Interest (ChEBI), Hastings J, Owen G, Dekker A, Ennis M, Kale N, Muthukrishnan V, Turner S, Swainston N, Mendes P, Steinbeck C. (2016). ChEBI in 2016: Improved services and an expanding collection of metabolites. Nucleic Acids Res]

Pathways (7)

PathwayProteinsCompounds
Galactose Metabolism1234
Galactosemia1234
stachyose biosynthesis523
ajugose biosynthesis II (galactinol-independent)16
stachyose degradation514
ajugose biosynthesis I (galactinol-dependent)25
The impact of Nsp14 on metabolism (COVID-19 Disease Map)084
ajugose biosynthesis I (galactinol-dependent)15
stachyose biosynthesis323
Stachyose biosynthesis27

Protein Targets (6)

Potency Measurements

ProteinTaxonomyMeasurementAverage (µ)Min (ref.)Avg (ref.)Max (ref.)Bioassay(s)
Chain A, Beta-lactamaseEscherichia coli K-12Potency112.20200.044717.8581100.0000AID485294
urokinase-type plasminogen activator precursorMus musculus (house mouse)Potency3.54810.15855.287912.5893AID540303
plasminogen precursorMus musculus (house mouse)Potency3.54810.15855.287912.5893AID540303
urokinase plasminogen activator surface receptor precursorMus musculus (house mouse)Potency3.54810.15855.287912.5893AID540303
gemininHomo sapiens (human)Potency0.74150.004611.374133.4983AID624296; AID624297
TAR DNA-binding protein 43Homo sapiens (human)Potency22.38721.778316.208135.4813AID652104
[prepared from compound, protein, and bioassay information from National Library of Medicine (NLM), extracted Dec-2023]

Biological Processes (18)

Processvia Protein(s)Taxonomy
negative regulation of protein phosphorylationTAR DNA-binding protein 43Homo sapiens (human)
mRNA processingTAR DNA-binding protein 43Homo sapiens (human)
RNA splicingTAR DNA-binding protein 43Homo sapiens (human)
negative regulation of gene expressionTAR DNA-binding protein 43Homo sapiens (human)
regulation of protein stabilityTAR DNA-binding protein 43Homo sapiens (human)
positive regulation of insulin secretionTAR DNA-binding protein 43Homo sapiens (human)
response to endoplasmic reticulum stressTAR DNA-binding protein 43Homo sapiens (human)
positive regulation of protein import into nucleusTAR DNA-binding protein 43Homo sapiens (human)
regulation of circadian rhythmTAR DNA-binding protein 43Homo sapiens (human)
regulation of apoptotic processTAR DNA-binding protein 43Homo sapiens (human)
negative regulation by host of viral transcriptionTAR DNA-binding protein 43Homo sapiens (human)
rhythmic processTAR DNA-binding protein 43Homo sapiens (human)
regulation of cell cycleTAR DNA-binding protein 43Homo sapiens (human)
3'-UTR-mediated mRNA destabilizationTAR DNA-binding protein 43Homo sapiens (human)
3'-UTR-mediated mRNA stabilizationTAR DNA-binding protein 43Homo sapiens (human)
nuclear inner membrane organizationTAR DNA-binding protein 43Homo sapiens (human)
amyloid fibril formationTAR DNA-binding protein 43Homo sapiens (human)
regulation of gene expressionTAR DNA-binding protein 43Homo sapiens (human)
[Information is prepared from geneontology information from the June-17-2024 release]

Molecular Functions (10)

Processvia Protein(s)Taxonomy
RNA polymerase II cis-regulatory region sequence-specific DNA bindingTAR DNA-binding protein 43Homo sapiens (human)
DNA bindingTAR DNA-binding protein 43Homo sapiens (human)
double-stranded DNA bindingTAR DNA-binding protein 43Homo sapiens (human)
RNA bindingTAR DNA-binding protein 43Homo sapiens (human)
mRNA 3'-UTR bindingTAR DNA-binding protein 43Homo sapiens (human)
protein bindingTAR DNA-binding protein 43Homo sapiens (human)
lipid bindingTAR DNA-binding protein 43Homo sapiens (human)
identical protein bindingTAR DNA-binding protein 43Homo sapiens (human)
pre-mRNA intronic bindingTAR DNA-binding protein 43Homo sapiens (human)
molecular condensate scaffold activityTAR DNA-binding protein 43Homo sapiens (human)
[Information is prepared from geneontology information from the June-17-2024 release]

Ceullar Components (9)

Processvia Protein(s)Taxonomy
intracellular non-membrane-bounded organelleTAR DNA-binding protein 43Homo sapiens (human)
nucleusTAR DNA-binding protein 43Homo sapiens (human)
nucleoplasmTAR DNA-binding protein 43Homo sapiens (human)
perichromatin fibrilsTAR DNA-binding protein 43Homo sapiens (human)
mitochondrionTAR DNA-binding protein 43Homo sapiens (human)
cytoplasmic stress granuleTAR DNA-binding protein 43Homo sapiens (human)
nuclear speckTAR DNA-binding protein 43Homo sapiens (human)
interchromatin granuleTAR DNA-binding protein 43Homo sapiens (human)
nucleoplasmTAR DNA-binding protein 43Homo sapiens (human)
chromatinTAR DNA-binding protein 43Homo sapiens (human)
[Information is prepared from geneontology information from the June-17-2024 release]

Bioassays (13)

Assay IDTitleYearJournalArticle
AID588499High-throughput multiplex microsphere screening for inhibitors of toxin protease, specifically Botulinum neurotoxin light chain A protease, MLPCN compound set2010Current protocols in cytometry, Oct, Volume: Chapter 13Microsphere-based flow cytometry protease assays for use in protease activity detection and high-throughput screening.
AID588499High-throughput multiplex microsphere screening for inhibitors of toxin protease, specifically Botulinum neurotoxin light chain A protease, MLPCN compound set2006Cytometry. Part A : the journal of the International Society for Analytical Cytology, May, Volume: 69, Issue:5
Microsphere-based protease assays and screening application for lethal factor and factor Xa.
AID588499High-throughput multiplex microsphere screening for inhibitors of toxin protease, specifically Botulinum neurotoxin light chain A protease, MLPCN compound set2010Assay and drug development technologies, Feb, Volume: 8, Issue:1
High-throughput multiplex flow cytometry screening for botulinum neurotoxin type a light chain protease inhibitors.
AID588497High-throughput multiplex microsphere screening for inhibitors of toxin protease, specifically Botulinum neurotoxin light chain F protease, MLPCN compound set2010Current protocols in cytometry, Oct, Volume: Chapter 13Microsphere-based flow cytometry protease assays for use in protease activity detection and high-throughput screening.
AID588497High-throughput multiplex microsphere screening for inhibitors of toxin protease, specifically Botulinum neurotoxin light chain F protease, MLPCN compound set2006Cytometry. Part A : the journal of the International Society for Analytical Cytology, May, Volume: 69, Issue:5
Microsphere-based protease assays and screening application for lethal factor and factor Xa.
AID588497High-throughput multiplex microsphere screening for inhibitors of toxin protease, specifically Botulinum neurotoxin light chain F protease, MLPCN compound set2010Assay and drug development technologies, Feb, Volume: 8, Issue:1
High-throughput multiplex flow cytometry screening for botulinum neurotoxin type a light chain protease inhibitors.
AID504812Inverse Agonists of the Thyroid Stimulating Hormone Receptor: HTS campaign2010Endocrinology, Jul, Volume: 151, Issue:7
A small molecule inverse agonist for the human thyroid-stimulating hormone receptor.
AID651635Viability Counterscreen for Primary qHTS for Inhibitors of ATXN expression
AID588501High-throughput multiplex microsphere screening for inhibitors of toxin protease, specifically Lethal Factor Protease, MLPCN compound set2010Current protocols in cytometry, Oct, Volume: Chapter 13Microsphere-based flow cytometry protease assays for use in protease activity detection and high-throughput screening.
AID588501High-throughput multiplex microsphere screening for inhibitors of toxin protease, specifically Lethal Factor Protease, MLPCN compound set2006Cytometry. Part A : the journal of the International Society for Analytical Cytology, May, Volume: 69, Issue:5
Microsphere-based protease assays and screening application for lethal factor and factor Xa.
AID588501High-throughput multiplex microsphere screening for inhibitors of toxin protease, specifically Lethal Factor Protease, MLPCN compound set2010Assay and drug development technologies, Feb, Volume: 8, Issue:1
High-throughput multiplex flow cytometry screening for botulinum neurotoxin type a light chain protease inhibitors.
AID504810Antagonists of the Thyroid Stimulating Hormone Receptor: HTS campaign2010Endocrinology, Jul, Volume: 151, Issue:7
A small molecule inverse agonist for the human thyroid-stimulating hormone receptor.
AID1745845Primary qHTS for Inhibitors of ATXN expression
[information is prepared from bioassay data collected from National Library of Medicine (NLM), extracted Dec-2023]

Research

Studies (185)

TimeframeStudies, This Drug (%)All Drugs %
pre-19909 (4.86)18.7374
1990's32 (17.30)18.2507
2000's54 (29.19)29.6817
2010's70 (37.84)24.3611
2020's20 (10.81)2.80
[information is prepared from research data collected from National Library of Medicine (NLM), extracted Dec-2023]

Study Types

Publication TypeThis drug (%)All Drugs (%)
Trials5 (2.63%)5.53%
Trials0 (0.00%)5.53%
Reviews3 (1.58%)6.00%
Reviews0 (0.00%)6.00%
Case Studies0 (0.00%)4.05%
Case Studies0 (0.00%)4.05%
Observational0 (0.00%)0.25%
Observational0 (0.00%)0.25%
Other182 (95.79%)84.16%
Other5 (100.00%)84.16%
[information is prepared from research data collected from National Library of Medicine (NLM), extracted Dec-2023]