Page last updated: 2024-09-27

desthiobiotin

Description

desthiobiotin: RN given refers to cpd without isomeric designation; structure [Medical Subject Headings (MeSH), National Library of Medicine, extracted Dec-2023]

(4R,5S)-dethiobiotin : The (4R,5S)-isomer of dethiobiotin. [Chemical Entities of Biological Interest (ChEBI), Hastings J, Owen G, Dekker A, Ennis M, Kale N, Muthukrishnan V, Turner S, Swainston N, Mendes P, Steinbeck C. (2016). ChEBI in 2016: Improved services and an expanding collection of metabolites. Nucleic Acids Res]

Cross-References

ID SourceID
PubMed CID445027
CHEMBL ID1232381
CHEBI ID42280
SCHEMBL ID143996
SCHEMBL ID20548075
MeSH IDM0045899

Synonyms (72)

Synonym
d-desthiobiotin
MLS001066403 ,
smr000471877
CHEMBL1232381
nsc-3085
dl-dethiobiotin
nsc-203773
636-20-4
biotin, dethio-
ai3-26390
5-methyl-2-oxo-4-imidazolidinecaproic acid
4-methyl-5-(omega-carboxyamyl)imidazolidone-2
(+)-dethiobiotin
d-dethiobiotin
6-(5-methyl-2-oxo-imidazolidin-4-yl)-hexanoic acid
4-imidazolidinehexanoic acid, 5-methyl-2-oxo-, (4r-cis)-
4-imidazolidinehexanoic acid, 5-methyl-2-oxo-, (4r,5s)-
epsilon-(4-methyl-5-imidazolidone-2)caproic acid
5-methyl-2-oxo-4-imidazolidinehexanoic acid
(4r-cis)-5-methyl-2-oxoimidazolidine-4-hexanoic acid
4-imidazolidinehexanoic acid, 5-methyl-2-oxo-, (4r,5s)- (8ci,9ci)
desthiobiotin
DTB ,
533-48-2
d-desthiobiotin, >=98% (tlc)
D1411_SIGMA ,
CHEBI:42280 ,
(4r,5s)-dethiobiotin
DB03775
(4r,5s)-5-methyl-2-oxo-4-imidazolidinehexanoic acid
(4r-cis)-5-methyl-2-oxo-4-imidazolidinehexanoic acid
einecs 208-566-2
F91C55D1-259D-437E-A748-A08C722D274F
6-[(4r,5s)-5-methyl-2-oxoimidazolidin-4-yl]hexanoic acid
BMSE000314
expt01280
nsc 3085
unii-71u5jb52ks
71u5jb52ks ,
HMS2235J03
desthiobiotin [mi]
.epsilon.-(4-methyl-5-imidazolidone-2)caproic acid
desthiobiotin, (+)-
unii-i64p0b487b
i64p0b487b ,
(+/-)-desthiobiotin
desthiobiotin, dl-
desthiobiotin, (+/-)-
4-imidazolidinehexanoic acid, 5-methyl-2-oxo-, cis-(+/-)-
4-imidazolidinehexanoic acid, 5-methyl-2-oxo-, (4r,5s)-rel-
SCHEMBL143996
6-[(4r,5s)-5-methyl-2-oxidanylidene-imidazolidin-4-yl]hexanoic acid
6-[(4r,5s)-5-methyl-2-oxo-4-imidazolidinyl]hexanoic acid
cid_445027
bdbm66184
6-[(4r,5s)-2-keto-5-methyl-imidazolidin-4-yl]hexanoic acid
AKOS030240689
AT20607
rac-desthio biotin
12022-42-3
DTXSID50876136
6-((4r,5s)-5-methyl-2-oxoimidazolidin-4-yl)hexanoic acid
SCHEMBL20548075
Q27094671
HY-128699
CS-0098609
iron potassium sulfide)
BS-48946
mfcd00213804
EN300-19745876
6-((4r,5s)-5-methyl-2-oxoimidazolidin-4-yl)hexanoicacid
(+)-desthiobiotin

Research Excerpts

Overview

ExcerptReference
"Desthiobiotin is a biotin analogue that binds less tightly to biotin-binding proteins and is easily displaced by biotin."( Beechem, JM; Eslamizar, L; Filanoski, BJ; Haugland, RP; Hirsch, JD; Malekzadeh, N, 2002)

Drug Classes (1)

ClassDescription
dethiobiotinA hexanoic acid having a 5-methyl-2-oxoimidazolidin-4-yl group at the 6-position.
[compound class information is derived from Chemical Entities of Biological Interest (ChEBI), Hastings J, Owen G, Dekker A, Ennis M, Kale N, Muthukrishnan V, Turner S, Swainston N, Mendes P, Steinbeck C. (2016). ChEBI in 2016: Improved services and an expanding collection of metabolites. Nucleic Acids Res]

Protein Targets (16)

Potency Measurements

ProteinTaxonomyMeasurementAverage (µ)Min (ref.)Avg (ref.)Max (ref.)Bioassay(s)
Chain A, JmjC domain-containing histone demethylation protein 3AHomo sapiens (human)Potency1.00000.631035.7641100.0000AID504339
WRNHomo sapiens (human)Potency24.85320.168331.2583100.0000AID651768; AID720497
Smad3Homo sapiens (human)Potency4.46680.00527.809829.0929AID588855
apical membrane antigen 1, AMA1Plasmodium falciparum 3D7Potency7.94330.707912.194339.8107AID720542
IDH1Homo sapiens (human)Potency58.04790.005210.865235.4813AID686970
Bloom syndrome protein isoform 1Homo sapiens (human)Potency19.18210.540617.639296.1227AID720503
chromobox protein homolog 1Homo sapiens (human)Potency0.70790.006026.168889.1251AID540317
DNA polymerase eta isoform 1Homo sapiens (human)Potency100.00000.100028.9256213.3130AID588591
gemininHomo sapiens (human)Potency0.01160.004611.374133.4983AID624296
[prepared from compound, protein, and bioassay information from National Library of Medicine (NLM), extracted Dec-2023]

Inhibition Measurements

ProteinTaxonomyMeasurementAverageMin (ref.)Avg (ref.)Max (ref.)Bioassay(s)
nonstructural protein 1Influenza A virus (A/California/07/2009(H1N1))IC50 (µMol)1.57000.200024.4540100.0000AID504329
photoreceptor-specific nuclear receptorHomo sapiens (human)IC50 (µMol)0.14910.03742.93408.9620AID2758
nuclear receptor corepressor 2 isoform 2Homo sapiens (human)IC50 (µMol)1.37801.02504.36119.9550AID2759
peroxisome proliferator-activated receptor gamma isoform 2Homo sapiens (human)IC50 (µMol)1.37801.02504.36119.9550AID2759
[prepared from compound, protein, and bioassay information from National Library of Medicine (NLM), extracted Dec-2023]

Activation Measurements

ProteinTaxonomyMeasurementAverageMin (ref.)Avg (ref.)Max (ref.)Bioassay(s)
insulin-degrading enzyme isoform 1Homo sapiens (human)EC50 (µMol)7.60152.02605.17858.9430AID588439; AID588681
[prepared from compound, protein, and bioassay information from National Library of Medicine (NLM), extracted Dec-2023]

Other Measurements

ProteinTaxonomyMeasurementAverageMin (ref.)Avg (ref.)Max (ref.)Bioassay(s)
protein AF-9 isoform aHomo sapiens (human)AC500.08000.08008.380217.9800AID720495
[prepared from compound, protein, and bioassay information from National Library of Medicine (NLM), extracted Dec-2023]

Bioassays (16)

Assay IDTitleYearJournalArticle
AID588499High-throughput multiplex microsphere screening for inhibitors of toxin protease, specifically Botulinum neurotoxin light chain A protease, MLPCN compound set2010Current protocols in cytometry, Oct, Volume: Chapter 13Microsphere-based flow cytometry protease assays for use in protease activity detection and high-throughput screening.
AID588499High-throughput multiplex microsphere screening for inhibitors of toxin protease, specifically Botulinum neurotoxin light chain A protease, MLPCN compound set2006Cytometry. Part A : the journal of the International Society for Analytical Cytology, May, Volume: 69, Issue:5
Microsphere-based protease assays and screening application for lethal factor and factor Xa.
AID588499High-throughput multiplex microsphere screening for inhibitors of toxin protease, specifically Botulinum neurotoxin light chain A protease, MLPCN compound set2010Assay and drug development technologies, Feb, Volume: 8, Issue:1
High-throughput multiplex flow cytometry screening for botulinum neurotoxin type a light chain protease inhibitors.
AID1745845Primary qHTS for Inhibitors of ATXN expression
AID1347082qHTS for Inhibitors of the Functional Ribonucleoprotein Complex (vRNP) of Lassa (LASV) Arenavirus: LASV Primary Screen - GLuc reporter signal2020Antiviral research, 01, Volume: 173A cell-based, infectious-free, platform to identify inhibitors of lassa virus ribonucleoprotein (vRNP) activity.
AID588501High-throughput multiplex microsphere screening for inhibitors of toxin protease, specifically Lethal Factor Protease, MLPCN compound set2010Current protocols in cytometry, Oct, Volume: Chapter 13Microsphere-based flow cytometry protease assays for use in protease activity detection and high-throughput screening.
AID588501High-throughput multiplex microsphere screening for inhibitors of toxin protease, specifically Lethal Factor Protease, MLPCN compound set2006Cytometry. Part A : the journal of the International Society for Analytical Cytology, May, Volume: 69, Issue:5
Microsphere-based protease assays and screening application for lethal factor and factor Xa.
AID588501High-throughput multiplex microsphere screening for inhibitors of toxin protease, specifically Lethal Factor Protease, MLPCN compound set2010Assay and drug development technologies, Feb, Volume: 8, Issue:1
High-throughput multiplex flow cytometry screening for botulinum neurotoxin type a light chain protease inhibitors.
AID1347083qHTS for Inhibitors of the Functional Ribonucleoprotein Complex (vRNP) of Lassa (LASV) Arenavirus: Viability assay - alamar blue signal for LASV Primary Screen2020Antiviral research, 01, Volume: 173A cell-based, infectious-free, platform to identify inhibitors of lassa virus ribonucleoprotein (vRNP) activity.
AID504787Counterscreen for agonists of nuclear receptor subfamily 2, group E, member 3 (NR2E3): TR-FRET-based biochemical high throughput assay to identify agonists of the interaction between peroxisome proliferator-activated receptor gamma (PPARg) and nuclear rec2006Assay and drug development technologies, Jun, Volume: 4, Issue:3
Development of the high throughput screening assay for identification of agonists of an orphan nuclear receptor.
AID1347086qHTS for Inhibitors of the Functional Ribonucleoprotein Complex (vRNP) of Lymphocytic Choriomeningitis Arenaviruses (LCMV): LCMV Primary Screen - GLuc reporter signal2020Antiviral research, 01, Volume: 173A cell-based, infectious-free, platform to identify inhibitors of lassa virus ribonucleoprotein (vRNP) activity.
AID588497High-throughput multiplex microsphere screening for inhibitors of toxin protease, specifically Botulinum neurotoxin light chain F protease, MLPCN compound set2010Current protocols in cytometry, Oct, Volume: Chapter 13Microsphere-based flow cytometry protease assays for use in protease activity detection and high-throughput screening.
AID588497High-throughput multiplex microsphere screening for inhibitors of toxin protease, specifically Botulinum neurotoxin light chain F protease, MLPCN compound set2006Cytometry. Part A : the journal of the International Society for Analytical Cytology, May, Volume: 69, Issue:5
Microsphere-based protease assays and screening application for lethal factor and factor Xa.
AID588497High-throughput multiplex microsphere screening for inhibitors of toxin protease, specifically Botulinum neurotoxin light chain F protease, MLPCN compound set2010Assay and drug development technologies, Feb, Volume: 8, Issue:1
High-throughput multiplex flow cytometry screening for botulinum neurotoxin type a light chain protease inhibitors.
AID651635Viability Counterscreen for Primary qHTS for Inhibitors of ATXN expression
AID1674226Inhibition of avidin (unknown origin)2020Journal of medicinal chemistry, 10-22, Volume: 63, Issue:20
Fragment Linking Strategies for Structure-Based Drug Design.
[information is prepared from bioassay data collected from National Library of Medicine (NLM), extracted Dec-2023]

Research

Studies (119)

TimeframeStudies, This Drug (%)All Drugs %
pre-199026 (21.85)18.7374
1990's21 (17.65)18.2507
2000's26 (21.85)29.6817
2010's37 (31.09)24.3611
2020's9 (7.56)2.80
[information is prepared from research data collected from National Library of Medicine (NLM), extracted Dec-2023]

Study Types

Publication TypeThis drug (%)All Drugs (%)
Trials0 (0.00%)5.53%
Reviews4 (3.25%)6.00%
Case Studies0 (0.00%)4.05%
Observational0 (0.00%)0.25%
Other119 (96.75%)84.16%
[information is prepared from research data collected from National Library of Medicine (NLM), extracted Dec-2023]