Page last updated: 2024-09-19

endolysin

Description

lysine-4,4,5,5-d4 : A deuterated compound that is lysne in which the methylene hydrogens at positions 4, 4, 5 and 5 have been replaced by deuterium. [Chemical Entities of Biological Interest (ChEBI), Hastings J, Owen G, Dekker A, Ennis M, Kale N, Muthukrishnan V, Turner S, Swainston N, Mendes P, Steinbeck C. (2016). ChEBI in 2016: Improved services and an expanding collection of metabolites. Nucleic Acids Res]

Cross-References

ID SourceID
PubMed CID866
CHEMBL ID28328
CHEBI ID25094
CHEBI ID132486
MeSH IDM0041233

Synonyms (71)

Synonym
lysine, dl-
EN300-34227
AKOS005441647
nsc-620353
dl-lysine
70-54-2
CHEBI:25094 ,
alpha,epsilon-diaminocaproic acid
nsc620353
2,6-diaminohexanoic acid
NCGC00166296-01
NCGC00164527-01
STK387123
(4,4,5,5-(2)h4)lysine
lysine-4,4,5,5-d4
CHEBI:132486
4D4E4503-F6A2-417D-A303-BDCAF08D1EBE
CHEMBL28328
L001250
FT-0693447
FT-0695058
2,6-bis(azanyl)hexanoic acid
A836916
NCGC00164527-02
BBL002414
2,6-diamino-hexanoic acid
h-dl-lys-oh
(+-)-lysine
ai4rt59273 ,
ec 200-740-6
einecs 200-740-6
ccris 8600
(rs)-lysine
unii-ai4rt59273
dl-alpha,epsilon-diaminocaproic acid
(+-)-2,6-diaminohexanoic acid
FT-0625483
FT-0625535
FT-0627942
AM20100662
dl-.alpha.,.epsilon.-diaminocaproic acid
(+/-)-lysine
(+/-)-2,6-diaminohexanoic acid
l-lysine base
Q-201026
CS-7806
mfcd00064433
F8880-9052
mfcd00064432
sr-01000944856
SR-01000944856-1
dl-lysine base
dl-lysine, 98%
dl-lysine, purum, >=95.0% (nt)
endolysin
SY006101
Z57127389
HY-B2236
FT-0772133
Q178430
tetrodotoxincitrate
DTXSID90859004 ,
SB23228
( inverted exclamation marka)-2,6-diaminocaproic acid
lys106
AS-56068
SY006447
SY279831
(+/-)-2,6-diaminocaproic acid
dtxcid00196790
l-lysine-2-15n dihydrochloride

Research Excerpts

Overview

ExcerptReference
"Endolysin is a phage-encoded cell-wall hydrolase which degrades the peptidoglycan layer of the bacterial cell wall. "( Chanarat, S; Chankhamhaengdecha, S; Fagan, RP; Janvilisri, T; Nuadthaisong, J; Phetruen, T; Phothichaisri, W, 2022)
"Endolysins are a novel class of antibacterials with proven efficacy in combating various bacterial infections, in vitro and in vivo. "( Chhibber, S; Harjai, K; Kaur, J; Kour, A; Panda, JJ, 2020)
"Endolysins prove to be a promising class of antibacterials due to their specificity and less chances of resistance development in bacterial pathogens."( Basit, A; Qadir, S; Qureshi, S; Rehman, SU, 2021)
"Endolysin is a promising antibiotic agent against gram-positive bacteria pathogen, such as Streptococcus pneumoniae, Streptococcus pyogenes and Staphylococcus aureus."( Lu, C; Wang, Y, 2009)

Effects

ExcerptReference
"This endolysin has a modular structure with an enzymatically active domain and a cell wall binding domain."( Briers, Y; Gerstmans, H; Lavigne, R; Mesnage, S; Rodríguez-Rubio, L; Thorpe, S, 2016)
"The endolysin has a lysozyme-like superfamily domain, and its activity was much stronger than that of lysozyme from chicken egg white."( Kang, DH; Lim, JA; Ryu, S; Shin, H, 2012)
"Endolysins have been proposed as a potential antibacterial alternative for aquaculture, especially against Vibrio; the bacterial-agents that most frequently cause disease. "( Barraza, A; Cardona-Félix, CS; Loera-Muro, A; Melo-López, FN; Zermeño-Cervantes, LA, 2021)
"Endolysins have been studied against a number of drug-resistant pathogens to assess their therapeutic ability."( Chhibber, S; Gondil, VS; Harjai, K, 2020)
"Endolysins have been proven to have efficient bactericidal activity against pathogens with low incidence of resistance."( Jiang, Y; Li, F; Qu, M; Tan, Z; Wang, L; Xu, D; Yao, L, 2021)
"This endolysin has a modular structure with an enzymatically active domain and a cell wall binding domain."( Briers, Y; Gerstmans, H; Lavigne, R; Mesnage, S; Rodríguez-Rubio, L; Thorpe, S, 2016)
"The endolysin has a lysozyme-like superfamily domain, and its activity was much stronger than that of lysozyme from chicken egg white."( Kang, DH; Lim, JA; Ryu, S; Shin, H, 2012)
"Endolysin engineering has opened a range of new applications for these proteins from food safety to environmental decontamination to more effective antimicrobials that are believed refractory to resistance development."( Dong, S; Donovan, DM; Klumpp, J; Nelson, DC; Pritchard, DG; Rodriguez-Rubio, L; Schmelcher, M, 2012)

Treatment

ExcerptReference
"So endolysin treatment may be a new approach for preventing and controlling of bacteria pathogen."( Lu, C; Wang, Y, 2009)

Roles (1)

RoleDescription
Daphnia magna metaboliteA Daphnia metabolite produced by the species Daphnia magna.
[role information is derived from Chemical Entities of Biological Interest (ChEBI), Hastings J, Owen G, Dekker A, Ennis M, Kale N, Muthukrishnan V, Turner S, Swainston N, Mendes P, Steinbeck C. (2016). ChEBI in 2016: Improved services and an expanding collection of metabolites. Nucleic Acids Res]

Drug Classes (3)

ClassDescription
alpha-amino acidAn amino acid in which the amino group is located on the carbon atom at the position alpha to the carboxy group.
diamino acidAny amino acid carrying two amino groups.
polar amino acidAny amino acid whose side chain is capable of forming one or more hydrogen bonds.
[compound class information is derived from Chemical Entities of Biological Interest (ChEBI), Hastings J, Owen G, Dekker A, Ennis M, Kale N, Muthukrishnan V, Turner S, Swainston N, Mendes P, Steinbeck C. (2016). ChEBI in 2016: Improved services and an expanding collection of metabolites. Nucleic Acids Res]

Pathways (4)

endolysin is involved in 4 pathway(s), involving a total of 25 unique proteins and 92 unique compounds

PathwayProteinsCompounds
22q11.2 copy number variation syndrome228
Biotin metabolism, including IMDs912
Amino acid transport defects (IEMs)925
Cerebral organic acidurias, including diseases527

Protein Targets (2)

Potency Measurements

ProteinTaxonomyMeasurementAverage (µ)Min (ref.)Avg (ref.)Max (ref.)Bioassay(s)
Chain A, MAJOR APURINIC/APYRIMIDINIC ENDONUCLEASEHomo sapiens (human)Potency0.14130.003245.467312,589.2998AID2517
lamin isoform A-delta10Homo sapiens (human)Potency28.18380.891312.067628.1838AID1487
[prepared from compound, protein, and bioassay information from National Library of Medicine (NLM), extracted Dec-2023]

Bioassays (1)

Assay IDTitleYearJournalArticle
AID504749qHTS profiling for inhibitors of Plasmodium falciparum proliferation2011Science (New York, N.Y.), Aug-05, Volume: 333, Issue:6043
Chemical genomic profiling for antimalarial therapies, response signatures, and molecular targets.
[information is prepared from bioassay data collected from National Library of Medicine (NLM), extracted Dec-2023]

Research

Studies (468)

TimeframeStudies, This Drug (%)All Drugs %
pre-199010 (2.14)18.7374
1990's14 (2.99)18.2507
2000's59 (12.61)29.6817
2010's250 (53.42)24.3611
2020's135 (28.85)2.80
[information is prepared from research data collected from National Library of Medicine (NLM), extracted Dec-2023]

Study Types

Publication TypeThis drug (%)All Drugs (%)
Trials3 (0.63%)5.53%
Reviews46 (9.73%)6.00%
Case Studies0 (0.00%)4.05%
Observational0 (0.00%)0.25%
Other424 (89.64%)84.16%
[information is prepared from research data collected from National Library of Medicine (NLM), extracted Dec-2023]

Research Highlights

Safety/Toxicity (4)

ArticleYear
Phage Endolysins: Advances in the World of Food Safety.
Cells, 08-29, Volume: 12, Issue: 17
2023
Safety Studies of Pneumococcal Endolysins Cpl-1 and Pal.
Viruses, 11-15, Volume: 10, Issue: 11
2018
Bacteriophage endolysins: applications for food safety.
Current opinion in biotechnology, Volume: 37
2016
Preclinical safety evaluation of intravenously administered SAL200 containing the recombinant phage endolysin SAL-1 as a pharmaceutical ingredient.
Antimicrobial agents and chemotherapy, Volume: 58, Issue: 4
2014
[information is derived through text-mining from research data collected from National Library of Medicine (NLM), extracted Dec-2023]

Pharmacokinetics (3)

ArticleYear
Pharmacokinetics and Tolerance of the Phage Endolysin-Based Candidate Drug SAL200 after a Single Intravenous Administration among Healthy Volunteers.
Antimicrobial agents and chemotherapy, Volume: 61, Issue: 6
2017
Pharmacokinetics of the phage endolysin-based candidate drug SAL200 in monkeys and its appropriate intravenous dosing period.
Clinical and experimental pharmacology & physiology, Volume: 43, Issue: 10
2016
A stable phage lysin (Cpl-1) dimer with increased antipneumococcal activity and decreased plasma clearance.
International journal of antimicrobial agents, Volume: 38, Issue: 6
2011
[information is derived through text-mining from research data collected from National Library of Medicine (NLM), extracted Dec-2023]

Bioavailability (2)

ArticleYear
Advanced engineering of third-generation lysins and formulation strategies for clinical applications.
Critical reviews in microbiology, Volume: 46, Issue: 5
2020
Comprehensive evaluation of chitosan nanoparticle based phage lysin delivery system; a novel approach to counter S. pneumoniae infections.
International journal of pharmaceutics, Jan-05, Volume: 573
2020
[information is derived through text-mining from research data collected from National Library of Medicine (NLM), extracted Dec-2023]

Dosage (4)

ArticleYear
Determination of Bactericidal Activity Spectrum of Recombinant Endolysins of ECD7, Am24, Ap22, Si3, and St11 Bacteriophages.
Bulletin of experimental biology and medicine, Volume: 170, Issue: 5
2021
Recent advances in therapeutic delivery systems of bacteriophage and bacteriophage-encoded endolysins.
Therapeutic delivery, Volume: 8, Issue: 7
2017
Pharmacokinetics and Tolerance of the Phage Endolysin-Based Candidate Drug SAL200 after a Single Intravenous Administration among Healthy Volunteers.
Antimicrobial agents and chemotherapy, Volume: 61, Issue: 6
2017
Pharmacokinetics of the phage endolysin-based candidate drug SAL200 in monkeys and its appropriate intravenous dosing period.
Clinical and experimental pharmacology & physiology, Volume: 43, Issue: 10
2016
[information is derived through text-mining from research data collected from National Library of Medicine (NLM), extracted Dec-2023]

Interactions (4)

ArticleYear
Characterization of Salmonella endolysin XFII produced by recombinant Escherichia coli and its application combined with chitosan in lysing Gram-negative bacteria.
Microbial cell factories, Aug-23, Volume: 21, Issue: 1
2022
Endolysin LysSTG2: Characterization and application to control Salmonella Typhimurium biofilm alone and in combination with slightly acidic hypochlorous water.
Food microbiology, Volume: 98
2021
Efficacy of nisin derivatives with improved biochemical characteristics, alone and in combination with endolysin PlyP100 to control Listeria monocytogenes in laboratory-scale Queso Fresco.
Food microbiology, Volume: 94
2021
Evaluation of paramagnetic beads coated with recombinant Listeria phage endolysin-derived cell-wall-binding domain proteins for separation of Listeria monocytogenes from raw milk in combination with culture-based and real-time polymerase chain reaction-ba
Foodborne pathogens and disease, Volume: 7, Issue: 9
2010
[information is derived through text-mining from research data collected from National Library of Medicine (NLM), extracted Dec-2023]