Page last updated: 2024-11-07

aaptamine

Description Research Excerpts Clinical Trials Roles Classes Pathways Study Profile Bioassays Related Drugs Related Conditions Protein Interactions Research Growth Market Indicators

Description

aaptamine: natural product from sea sponge Aaptos aaptos; structure given in first source; RN from CA Index Guide 1984 [Medical Subject Headings (MeSH), National Library of Medicine, extracted Dec-2023]

Cross-References

ID SourceID
PubMed CID122826
CHEMBL ID234658
SCHEMBL ID8024280
MeSH IDM0128958

Synonyms (25)

Synonym
8,9-dimethoxy-4h-benzo[de][1,6]naphthyridine
SMP2_000065
8,9-dimethoxy-1h-benzo(de)(1,6)naphthyridine
brn 3550089
aaptamine
1h-benzo(de)(1,6)naphthyridine, 8,9-dimethoxy-
1h-benzo[de][1,6]naphthyridine, 8,9-dimethoxy-
85547-22-4
CHEMBL234658
8,9-dimethoxy-1h-benzo[de][1,6]naphthyridine
fgw9d01coe ,
unii-fgw9d01coe
bdbm50356012
IVXSXOFPZFVZTM-UHFFFAOYSA-N
SCHEMBL8024280
AKOS027381877
Q5682186
HY-N4225
CS-0032464
8,9-dimethoxy-1h-benzo[de][1,6]naphtyridine
F82184
MS-23294
DTXSID201006106
11,12-dimethoxy-2,6-diazatricyclo[7.3.1.05,13]trideca-1,3,5(13),7,9,11-hexaene
GLXC-19141

Research Excerpts

Overview

Aaptamine is a marine compound isolated from the sponge Aaptos aaptos showing antiproliferative properties via an undefined mode of action. It is a potent ocean-derived non-traditional drug candidate against human cancers.

ExcerptReferenceRelevance
"Aaptamine is a potent ocean-derived non-traditional drug candidate against human cancers. "( Aaptamine attenuates the proliferation and progression of non-small cell lung carcinoma.
Chen, W; Dai, J; Du, J; Gong, K; Guo, J; Miao, S; Wu, Y; Xi, S; Yang, L, 2020
)
3.44
"Aaptamine is a marine compound isolated from the sponge Aaptos aaptos showing antiproliferative properties via an undefined mode of action. "( Proteomic profiling of germ cell cancer cells treated with aaptamine, a marine alkaloid with antiproliferative activity.
Balabanov, S; Bokemeyer, C; Dyshlovoy, SA; Fedorov, SN; Gesell Salazar, M; Hauber, J; Honecker, F; Jacobsen, C; Krepstakies, M; Naeth, I; Preukschas, M; Priyadarshini, P; Scharf, C; Shubina, LK; Sievert, H; Stonik, VA; Venz, S; Walther, R, 2012
)
2.06

Effects

ExcerptReferenceRelevance
"Aaptamine has potent cytotoxicity that may be explained by its ability to intercalate DNA. "( Antiviral and anticancer optimization studies of the DNA-binding marine natural product aaptamine.
Bowling, JJ; Graves, DE; Hamann, MT; Ivey, K; Kelly, M; Pennaka, HK; Schinazi, RF; Valeriote, FA; Wahyuono, S, 2008
)
2.01

Treatment

ExcerptReferenceRelevance
"Aaptamine treatment at the IC50 for 48 h resulted in alteration of 10 proteins, of which five each showed up- and down-regulation."( Proteomic profiling of germ cell cancer cells treated with aaptamine, a marine alkaloid with antiproliferative activity.
Balabanov, S; Bokemeyer, C; Dyshlovoy, SA; Fedorov, SN; Gesell Salazar, M; Hauber, J; Honecker, F; Jacobsen, C; Krepstakies, M; Naeth, I; Preukschas, M; Priyadarshini, P; Scharf, C; Shubina, LK; Sievert, H; Stonik, VA; Venz, S; Walther, R, 2012
)
1.34

Toxicity

ExcerptReferenceRelevance
"Nephrotoxicity is the major dose-limiting adverse effect of cisplatin (CisPt) and results from CisPt-induced damage of tubular cells."( Spongean alkaloids protect rat kidney cells against cisplatin-induced cytotoxicity.
Fritz, G; Funk, F; Henninger, C; Krüger, K; Proksch, P; Thomale, J; Wätjen, W, 2014
)
0.4

Dosage Studied

ExcerptRelevanceReference
"In the rabbit isolated aorta and renal artery, aaptamine (3 X 10(-5)M), a novel heteroaromatic substance isolated from a sea sponge Aaptos aaptos produced a parallel, rightward shift of the dose-response curve for noradrenaline, whereas that for histamine or KCl was not affected."( Alpha-adrenoceptor blocking action of aaptamine, a novel marine natural product, in vascular smooth muscle.
Kajiwara, A; Kobayashi, J; Nakamura, H; Ohizumi, Y, 1984
)
0.8
[information is derived through text-mining from research data collected from National Library of Medicine (NLM), extracted Dec-2023]

Protein Targets (7)

Inhibition Measurements

ProteinTaxonomyMeasurementAverageMin (ref.)Avg (ref.)Max (ref.)Bioassay(s)
Acetylcholine receptor subunit alphaTetronarce californica (Pacific electric ray)Ki34.00000.00279.359634.0000AID743370
Acetylcholine receptor subunit betaTetronarce californica (Pacific electric ray)Ki34.00000.002711.753834.0000AID743370
Acetylcholine receptor subunit gammaTetronarce californica (Pacific electric ray)Ki34.00000.002711.753834.0000AID743370
Acetylcholine receptor subunit deltaTetronarce californica (Pacific electric ray)Ki34.00000.000110.074734.0000AID743370
Acetylcholine-binding proteinLymnaea stagnalis (great pond snail)Ki3.00000.00011.881128.0000AID743369
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1Homo sapiens (human)IC50 (µMol)120.00000.40000.40000.4000AID625573
[prepared from compound, protein, and bioassay information from National Library of Medicine (NLM), extracted Dec-2023]

Activation Measurements

ProteinTaxonomyMeasurementAverageMin (ref.)Avg (ref.)Max (ref.)Bioassay(s)
Endothelial PAS domain-containing protein 1Homo sapiens (human)EC50 (µMol)100.00000.02000.93303.3000AID707849
[prepared from compound, protein, and bioassay information from National Library of Medicine (NLM), extracted Dec-2023]

Biological Processes (29)

Processvia Protein(s)Taxonomy
UDP-N-acetylglucosamine biosynthetic processGlutamine--fructose-6-phosphate aminotransferase [isomerizing] 1Homo sapiens (human)
energy reserve metabolic processGlutamine--fructose-6-phosphate aminotransferase [isomerizing] 1Homo sapiens (human)
glutamine metabolic processGlutamine--fructose-6-phosphate aminotransferase [isomerizing] 1Homo sapiens (human)
circadian regulation of gene expressionGlutamine--fructose-6-phosphate aminotransferase [isomerizing] 1Homo sapiens (human)
UDP-N-acetylglucosamine metabolic processGlutamine--fructose-6-phosphate aminotransferase [isomerizing] 1Homo sapiens (human)
fructose 6-phosphate metabolic processGlutamine--fructose-6-phosphate aminotransferase [isomerizing] 1Homo sapiens (human)
protein N-linked glycosylationGlutamine--fructose-6-phosphate aminotransferase [isomerizing] 1Homo sapiens (human)
response to hypoxiaEndothelial PAS domain-containing protein 1Homo sapiens (human)
angiogenesisEndothelial PAS domain-containing protein 1Homo sapiens (human)
embryonic placenta developmentEndothelial PAS domain-containing protein 1Homo sapiens (human)
blood vessel remodelingEndothelial PAS domain-containing protein 1Homo sapiens (human)
regulation of heart rateEndothelial PAS domain-containing protein 1Homo sapiens (human)
epithelial cell maturationEndothelial PAS domain-containing protein 1Homo sapiens (human)
response to oxidative stressEndothelial PAS domain-containing protein 1Homo sapiens (human)
mitochondrion organizationEndothelial PAS domain-containing protein 1Homo sapiens (human)
signal transductionEndothelial PAS domain-containing protein 1Homo sapiens (human)
visual perceptionEndothelial PAS domain-containing protein 1Homo sapiens (human)
erythrocyte differentiationEndothelial PAS domain-containing protein 1Homo sapiens (human)
lung developmentEndothelial PAS domain-containing protein 1Homo sapiens (human)
norepinephrine metabolic processEndothelial PAS domain-containing protein 1Homo sapiens (human)
mRNA transcription by RNA polymerase IIEndothelial PAS domain-containing protein 1Homo sapiens (human)
surfactant homeostasisEndothelial PAS domain-containing protein 1Homo sapiens (human)
positive regulation of transcription by RNA polymerase IIEndothelial PAS domain-containing protein 1Homo sapiens (human)
myoblast fate commitmentEndothelial PAS domain-containing protein 1Homo sapiens (human)
multicellular organismal-level iron ion homeostasisEndothelial PAS domain-containing protein 1Homo sapiens (human)
cellular response to hypoxiaEndothelial PAS domain-containing protein 1Homo sapiens (human)
positive regulation of cold-induced thermogenesisEndothelial PAS domain-containing protein 1Homo sapiens (human)
regulation of protein neddylationEndothelial PAS domain-containing protein 1Homo sapiens (human)
regulation of transcription by RNA polymerase IIEndothelial PAS domain-containing protein 1Homo sapiens (human)
[Information is prepared from geneontology information from the June-17-2024 release]

Molecular Functions (11)

Processvia Protein(s)Taxonomy
glutamine-fructose-6-phosphate transaminase (isomerizing) activityGlutamine--fructose-6-phosphate aminotransferase [isomerizing] 1Homo sapiens (human)
carbohydrate derivative bindingGlutamine--fructose-6-phosphate aminotransferase [isomerizing] 1Homo sapiens (human)
sequence-specific DNA bindingEndothelial PAS domain-containing protein 1Homo sapiens (human)
RNA polymerase II cis-regulatory region sequence-specific DNA bindingEndothelial PAS domain-containing protein 1Homo sapiens (human)
DNA-binding transcription factor activity, RNA polymerase II-specificEndothelial PAS domain-containing protein 1Homo sapiens (human)
transcription coactivator bindingEndothelial PAS domain-containing protein 1Homo sapiens (human)
DNA-binding transcription activator activity, RNA polymerase II-specificEndothelial PAS domain-containing protein 1Homo sapiens (human)
protein bindingEndothelial PAS domain-containing protein 1Homo sapiens (human)
protein heterodimerization activityEndothelial PAS domain-containing protein 1Homo sapiens (human)
RNA polymerase II-specific DNA-binding transcription factor bindingEndothelial PAS domain-containing protein 1Homo sapiens (human)
RNA polymerase II transcription regulatory region sequence-specific DNA bindingEndothelial PAS domain-containing protein 1Homo sapiens (human)
[Information is prepared from geneontology information from the June-17-2024 release]

Ceullar Components (6)

Processvia Protein(s)Taxonomy
cytosolGlutamine--fructose-6-phosphate aminotransferase [isomerizing] 1Homo sapiens (human)
extracellular exosomeGlutamine--fructose-6-phosphate aminotransferase [isomerizing] 1Homo sapiens (human)
nucleoplasmEndothelial PAS domain-containing protein 1Homo sapiens (human)
cytosolEndothelial PAS domain-containing protein 1Homo sapiens (human)
nuclear speckEndothelial PAS domain-containing protein 1Homo sapiens (human)
chromatinEndothelial PAS domain-containing protein 1Homo sapiens (human)
transcription regulator complexEndothelial PAS domain-containing protein 1Homo sapiens (human)
[Information is prepared from geneontology information from the June-17-2024 release]

Bioassays (32)

Assay IDTitleYearJournalArticle
AID482936Inhibition of chymotrypsin-like activity of purified 20S proteasome from human erythrocyte2010Bioorganic & medicinal chemistry letters, Jun-01, Volume: 20, Issue:11
Aaptamine, an alkaloid from the sponge Aaptos suberitoides, functions as a proteasome inhibitor.
AID300936Inhibition of SrtA2007Bioorganic & medicinal chemistry letters, Oct-01, Volume: 17, Issue:19
Aaptamines as sortase A inhibitors from the tropical sponge Aaptos aaptos.
AID400878Antineoplastic activity against human KM20L2 cells2004Journal of natural products, Mar, Volume: 67, Issue:3
Antineoplastic agents. 380. Isolation and X-ray crystal structure determination of isoaaptamine from the Republic of Singapore Hymeniacidon sp. and conversion to the phosphate prodrug hystatin 1.
AID1682634Cytotoxicity against human HeLa cells assessed as reduction in cell viability after 48 hrs by CCK8 assay
AID707849Inhibition of HIF2alpha in human 786-0 cells expressing truncated HIF1alpha assessed as reduction in luciferase activity after 24 hrs by reporter gene assay2012Journal of natural products, Sep-28, Volume: 75, Issue:9
Inhibition of hypoxia inducible factor-2 transcription: isolation of active modulators from marine sponges.
AID400879Antineoplastic activity against human SK-MEL-5 cells2004Journal of natural products, Mar, Volume: 67, Issue:3
Antineoplastic agents. 380. Isolation and X-ray crystal structure determination of isoaaptamine from the Republic of Singapore Hymeniacidon sp. and conversion to the phosphate prodrug hystatin 1.
AID299139Inhibition of bacterial glucosamine-6-phosphate synthase by colorimetric morgan-elson assay2007Bioorganic & medicinal chemistry letters, Apr-01, Volume: 17, Issue:7
Discovering new inhibitors of bacterial glucosamine-6P synthase (GlmS) by docking simulations.
AID381210Cytotoxicity against mouse P388 cells after 3 days by MTT assay1999Journal of natural products, Sep, Volume: 62, Issue:9
Structures and cytotoxicity relationship of isoaaptamine and aaptamine derivatives.
AID482935Inhibition of caspase like activity of partially purified rat liver proteasome by spectrofluorimetry2010Bioorganic & medicinal chemistry letters, Jun-01, Volume: 20, Issue:11
Aaptamine, an alkaloid from the sponge Aaptos suberitoides, functions as a proteasome inhibitor.
AID1682633Cytotoxicity against human MCF7 cells assessed as reduction in cell viability after 48 hrs by CCK8 assay
AID381213Cytotoxicity against human HT-29 cells after 6 days by MTT assay1999Journal of natural products, Sep, Volume: 62, Issue:9
Structures and cytotoxicity relationship of isoaaptamine and aaptamine derivatives.
AID381212Cytotoxicity against human A549 cells after 6 days by MTT assay1999Journal of natural products, Sep, Volume: 62, Issue:9
Structures and cytotoxicity relationship of isoaaptamine and aaptamine derivatives.
AID625573Inhibition of GFAT using N-acetylglucosamine 6-phosphate as substrate2011Bioorganic & medicinal chemistry letters, Nov-01, Volume: 21, Issue:21
Discovery of 1-arylcarbonyl-6,7-dimethoxyisoquinoline derivatives as glutamine fructose-6-phosphate amidotransferase (GFAT) inhibitors.
AID300937Antimicrobial activity against Staphylococcus aureus Newman2007Bioorganic & medicinal chemistry letters, Oct-01, Volume: 17, Issue:19
Aaptamines as sortase A inhibitors from the tropical sponge Aaptos aaptos.
AID381211Cytotoxicity against human KB16 cells after 3 days by MTT assay1999Journal of natural products, Sep, Volume: 62, Issue:9
Structures and cytotoxicity relationship of isoaaptamine and aaptamine derivatives.
AID400606Antineoplastic activity against human A498 cells2004Journal of natural products, Mar, Volume: 67, Issue:3
Antineoplastic agents. 380. Isolation and X-ray crystal structure determination of isoaaptamine from the Republic of Singapore Hymeniacidon sp. and conversion to the phosphate prodrug hystatin 1.
AID355800Antioxidant activity assessed as DPPH free radical scavenging activity by TLC autoradiographic assay2003Journal of natural products, May, Volume: 66, Issue:5
Marine natural products as novel antioxidant prototypes.
AID400877Antineoplastic activity against human NCI-H460 cells2004Journal of natural products, Mar, Volume: 67, Issue:3
Antineoplastic agents. 380. Isolation and X-ray crystal structure determination of isoaaptamine from the Republic of Singapore Hymeniacidon sp. and conversion to the phosphate prodrug hystatin 1.
AID482934Inhibition of trypsin like activity of partially purified rat liver proteasome by spectrofluorimetry2010Bioorganic & medicinal chemistry letters, Jun-01, Volume: 20, Issue:11
Aaptamine, an alkaloid from the sponge Aaptos suberitoides, functions as a proteasome inhibitor.
AID482933Inhibition of chymotrypsin like activity of partially purified rat liver proteasome by spectrofluorimetry2010Bioorganic & medicinal chemistry letters, Jun-01, Volume: 20, Issue:11
Aaptamine, an alkaloid from the sponge Aaptos suberitoides, functions as a proteasome inhibitor.
AID400604Antineoplastic activity against human OVCAR-3 cells2004Journal of natural products, Mar, Volume: 67, Issue:3
Antineoplastic agents. 380. Isolation and X-ray crystal structure determination of isoaaptamine from the Republic of Singapore Hymeniacidon sp. and conversion to the phosphate prodrug hystatin 1.
AID400605Antineoplastic activity against human SF295 cells2004Journal of natural products, Mar, Volume: 67, Issue:3
Antineoplastic agents. 380. Isolation and X-ray crystal structure determination of isoaaptamine from the Republic of Singapore Hymeniacidon sp. and conversion to the phosphate prodrug hystatin 1.
AID731497Cytotoxic activity against mouse L5178Y cells assessed as growth inhibition at 10 ug/ml by MTT assay2013Journal of natural products, Jan-25, Volume: 76, Issue:1
Aaptamine derivatives from the Indonesian sponge Aaptos suberitoides.
AID1682631Cytotoxicity against human SNK6 cells assessed as reduction in cell viability after 48 hrs by CCK8 assay
AID1682632Cytotoxicity against human NB4 cells assessed as reduction in cell viability after 48 hrs by CCK8 assay
AID355801Antioxidant activity against TPA-induced ROS production in human HL60 cells by 2',7'-dichlorodihydrofluorescein diacetate cellular-based assay2003Journal of natural products, May, Volume: 66, Issue:5
Marine natural products as novel antioxidant prototypes.
AID400603Antineoplastic activity against mouse P388 cells2004Journal of natural products, Mar, Volume: 67, Issue:3
Antineoplastic agents. 380. Isolation and X-ray crystal structure determination of isoaaptamine from the Republic of Singapore Hymeniacidon sp. and conversion to the phosphate prodrug hystatin 1.
AID482937Inhibition of caspase-like activity of 20S proteasome in human erythrocyte by spectrofluorimetry2010Bioorganic & medicinal chemistry letters, Jun-01, Volume: 20, Issue:11
Aaptamine, an alkaloid from the sponge Aaptos suberitoides, functions as a proteasome inhibitor.
AID482938Cytotoxicity against human HeLa cells after 3 days by MTT assay2010Bioorganic & medicinal chemistry letters, Jun-01, Volume: 20, Issue:11
Aaptamine, an alkaloid from the sponge Aaptos suberitoides, functions as a proteasome inhibitor.
AID731496Cytotoxic activity against mouse L5178Y cells by MTT assay2013Journal of natural products, Jan-25, Volume: 76, Issue:1
Aaptamine derivatives from the Indonesian sponge Aaptos suberitoides.
AID743370In vitro ability to inhibit the binding of [125I]alpha-bungarotoxin to Nicotinic acetylcholine receptor on membranes prepared from the electric organs of Torpedo californica2014Marine drugs, Mar-28, Volume: 12, Issue:4
Marine natural products acting on the acetylcholine-binding protein and nicotinic receptors: from computer modeling to binding studies and electrophysiology.
AID743369Displacement of [125I]alpha-bungarotoxin from Lymnaea stagnalis His-tagged AchBP2014Marine drugs, Mar-28, Volume: 12, Issue:4
Marine natural products acting on the acetylcholine-binding protein and nicotinic receptors: from computer modeling to binding studies and electrophysiology.
[information is prepared from bioassay data collected from National Library of Medicine (NLM), extracted Dec-2023]

Research

Studies (45)

TimeframeStudies, This Drug (%)All Drugs %
pre-19901 (2.22)18.7374
1990's1 (2.22)18.2507
2000's11 (24.44)29.6817
2010's24 (53.33)24.3611
2020's8 (17.78)2.80
[information is prepared from research data collected from National Library of Medicine (NLM), extracted Dec-2023]

Market Indicators

Research Demand Index: 24.84

According to the monthly volume, diversity, and competition of internet searches for this compound, as well the volume and growth of publications, there is estimated to be moderate demand-to-supply ratio for research on this compound.

MetricThis Compound (vs All)
Research Demand Index24.84 (24.57)
Research Supply Index3.85 (2.92)
Research Growth Index5.36 (4.65)
Search Engine Demand Index26.67 (26.88)
Search Engine Supply Index2.00 (0.95)

This Compound (24.84)

All Compounds (24.57)

Study Types

Publication TypeThis drug (%)All Drugs (%)
Trials0 (0.00%)5.53%
Reviews2 (4.35%)6.00%
Case Studies0 (0.00%)4.05%
Observational0 (0.00%)0.25%
Other44 (95.65%)84.16%
[information is prepared from research data collected from National Library of Medicine (NLM), extracted Dec-2023]