Page last updated: 2024-11-11

capuramycin

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Description

capuramycin: from Streptomyces griseus 446-S3; structure given in first source [Medical Subject Headings (MeSH), National Library of Medicine, extracted Dec-2023]

Cross-References

ID SourceID
PubMed CID5487121
CHEMBL ID96695
SCHEMBL ID14598937
MeSH IDM0142975

Synonyms (25)

Synonym
CHEMBL96695 ,
brn 5210055
446s3-1
antibiotic 446s3-1
beta-d-allofuranuronamide, 1-deoxy-5-o-(4-deoxy-n-(hexahydro-2-oxo-1h-azepin-3-yl)-beta-l-erythro-hex-4-enopyranuronamidosyl)-1-(3,4-dihydro-2,4-dioxo-1(2h)-pyrimidinyl)-3-o-methyl-, (s)-
(6-{(1r)[(2s,3s,4r,5r)-5-(2,4-dioxo(1,3-dihydropyrimidinyl))-4-hydroxy-3-methoxyoxolan-2-yl]carbamoylmethoxy}(4s,5s,6s)-4,5-dihydroxy(4h-5,6-dihydropyran-2-yl))-n-((3s)-2-oxoazaperhydroepin-3-yl)carboxamide
(2s,3s,4s)-2-[(1r)-2-amino-1-[(2s,3s,4r,5r)-5-(2,4-dioxopyrimidin-1-yl)-4-hydroxy-3-methoxy-tetrahydrofuran-2-yl]-2-oxo-ethoxy]-3,4-dihydroxy-n-[(3s)-2-oxoazepan-3-yl]-3,4-dihydro-2h-pyran-6-carboxamide
capuramycin
102770-00-3
bdbm50135599
(4s,5s,6s)-6-{(r)-carbamoyl-[(2s,3s,4r,5r)-5-(2,4-dioxo-3,4-dihydro-2h-pyrimidin-1-yl)-4-hydroxy-3-methoxy-tetrahydro-furan-2-yl]-methoxy}-4,5-dihydroxy-5,6-dihydro-4h-pyran-2-carboxylic acid ((s)-2-oxo-azepan-3-yl)-amide
a-500359 b
(2s,3s,4s)-2-[(1r)-2-amino-1-[(2s,3s,4r,5r)-5-(2,4-dioxopyrimidin-1-yl)-4-hydroxy-3-methoxyoxolan-2-yl]-2-oxoethoxy]-3,4-dihydroxy-n-[(3s)-2-oxoazepan-3-yl]-3,4-dihydro-2h-pyran-6-carboxamide
624x0oxy6y ,
unii-624x0oxy6y
SCHEMBL14598937
.alpha.-l-talofuranuronamide, 1-deoxy-5-o-(4-deoxy-n-(hexahydro-2-oxo-1h-azepin-3-yl)-.beta.-l-erythro-hex-4-enopyranuronamidosyl)-1-(3,4-dihydro-2,4-dioxo-1(2h)-pyrimidinyl)-3-o-methyl-, (s)-
a-500359b
.alpha.-l-talofuranuronamide, 1-deoxy-5-o-(4-deoxy-n-((3s)-hexahydro-2-oxo-1h-azepin-3-yl)-.beta.-l-erythro-hex-4-enopyranuronamidosyl)-1-(3,4-dihydro-2,4-dioxo-1(2h)-pyrimidinyl)-3-o-methyl-
1-deoxy-5-o-(4-deoxy-n-((3s)-hexahydro-2-oxo-1h-azepin-3-yl)-.beta.-l-erythro-hex-4-enopyranuronamidosyl)-1-(3,4-dihydro-2,4-dioxo-1(2h)-pyrimidinyl)-3-o-methyl-.alpha.-l-talofuranuronamide
NKM ,
(2~{s},3~{s},4~{s})-2-[(1~{r})-2-azanyl-1-[(2~{s},3~{s},4~{r},5~{r})-5-[2,4-bis(oxidanylidene)pyrimidin-1-yl]-3-methoxy-4-oxidanyl-oxolan-2-yl]-2-oxidanylidene-ethoxy]-3,4-bis(oxidanyl)-~{n}-[(3~{s})-2-oxidanylideneazepan-3-yl]-3,4-dihydro-2~{h}-pyran-6-c
(2s,3s,4s)-2-{(1r)-2-amino-1-[(2s,3s,4r,5r)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2h)-yl)-4-hydroxy-3-methoxytetrahydrofuran-2-yl]-2-oxoethoxy}-3,4-dihydroxy-n-[(3s)-2-oxoazepan-3-yl]-3,4-dihydro-2h-pyran-6-carboxamide (non-preferred name)
DTXSID501318180
(2s,3s,4s)-2-((r)-2-amino-1-((2s,3s,4r,5r)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2h)-yl)-4-hydroxy-3-methoxytetrahydrofuran-2-yl)-2-oxoethoxy)-3,4-dihydroxy-n-((s)-2-oxoazepan-3-yl)-3,4-dihydro-2h-pyran-6-carboxamide

Research Excerpts

Actions

ExcerptReferenceRelevance
"Capuramycin displays a narrow spectrum of antibacterial activity by targeting bacterial translocase I (MraY). "( DPAGT1 Inhibitors of Capuramycin Analogues and Their Antimigratory Activities of Solid Tumors.
Clemons, WM; Gillman, CD; Glazer, ES; Hevener, KE; Hussain, SM; Kansal, RG; Kurosu, M; Miranda-Carboni, GA; Mitachi, K; Yun, HG, 2020
)
2.32
[information is derived through text-mining from research data collected from National Library of Medicine (NLM), extracted Dec-2023]

Protein Targets (3)

Inhibition Measurements

ProteinTaxonomyMeasurementAverageMin (ref.)Avg (ref.)Max (ref.)Bioassay(s)
Phospho-N-acetylmuramoyl-pentapeptide-transferaseEscherichia coli K-12IC50 (µMol)0.01800.01800.01800.0180AID210950
Phospho-N-acetylmuramoyl-pentapeptide-transferaseStaphylococcus aureusIC50 (µMol)0.33000.02200.17600.3300AID1917609
[prepared from compound, protein, and bioassay information from National Library of Medicine (NLM), extracted Dec-2023]

Biological Processes (8)

Processvia Protein(s)Taxonomy
regulation of cell shapePhospho-N-acetylmuramoyl-pentapeptide-transferaseEscherichia coli K-12
peptidoglycan biosynthetic processPhospho-N-acetylmuramoyl-pentapeptide-transferaseEscherichia coli K-12
cell divisionPhospho-N-acetylmuramoyl-pentapeptide-transferaseEscherichia coli K-12
cell wall organizationPhospho-N-acetylmuramoyl-pentapeptide-transferaseEscherichia coli K-12
cell wall macromolecule biosynthetic processPhospho-N-acetylmuramoyl-pentapeptide-transferaseEscherichia coli K-12
UDP-N-acetylglucosamine metabolic processUDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferaseHomo sapiens (human)
protein N-linked glycosylationUDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferaseHomo sapiens (human)
dolichol-linked oligosaccharide biosynthetic processUDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferaseHomo sapiens (human)
[Information is prepared from geneontology information from the June-17-2024 release]

Molecular Functions (10)

Processvia Protein(s)Taxonomy
phospho-N-acetylmuramoyl-pentapeptide-transferase activityPhospho-N-acetylmuramoyl-pentapeptide-transferaseEscherichia coli K-12
transferase activityPhospho-N-acetylmuramoyl-pentapeptide-transferaseEscherichia coli K-12
phosphotransferase activity, for other substituted phosphate groupsPhospho-N-acetylmuramoyl-pentapeptide-transferaseEscherichia coli K-12
metal ion bindingPhospho-N-acetylmuramoyl-pentapeptide-transferaseEscherichia coli K-12
UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate transferase activityPhospho-N-acetylmuramoyl-pentapeptide-transferaseEscherichia coli K-12
UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activityUDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferaseHomo sapiens (human)
UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase activityUDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferaseHomo sapiens (human)
protein bindingUDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferaseHomo sapiens (human)
glycosyltransferase activityUDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferaseHomo sapiens (human)
identical protein bindingUDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferaseHomo sapiens (human)
metal ion bindingUDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferaseHomo sapiens (human)
[Information is prepared from geneontology information from the June-17-2024 release]

Ceullar Components (4)

Processvia Protein(s)Taxonomy
plasma membranePhospho-N-acetylmuramoyl-pentapeptide-transferaseEscherichia coli K-12
membranePhospho-N-acetylmuramoyl-pentapeptide-transferaseEscherichia coli K-12
plasma membranePhospho-N-acetylmuramoyl-pentapeptide-transferaseEscherichia coli K-12
endoplasmic reticulum membraneUDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferaseHomo sapiens (human)
membraneUDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferaseHomo sapiens (human)
intracellular membrane-bounded organelleUDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferaseHomo sapiens (human)
membraneUDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferaseHomo sapiens (human)
[Information is prepared from geneontology information from the June-17-2024 release]

Bioassays (38)

Assay IDTitleYearJournalArticle
AID1917618Antibacterial activity against Pseudomonas aeruginosa2022Bioorganic & medicinal chemistry, 11-01, Volume: 73Synthesis of capuramycin and its analogues via a Ferrier-type I reaction and their biological evaluation.
AID143695Antimycobacterial activity against Mycobacterium avium (NIHJ1605)2003Bioorganic & medicinal chemistry letters, Sep-01, Volume: 13, Issue:17
Synthesis and antimycobacterial activity of capuramycin analogues. Part 1: substitution of the azepan-2-one moiety of capuramycin.
AID144144Antimycobacterial activity against Mycobacterium kansasii ATCC 124782003Bioorganic & medicinal chemistry letters, Sep-01, Volume: 13, Issue:17
Synthesis and antimycobacterial activity of capuramycin analogues. Part 2: acylated derivatives of capuramycin-related compounds.
AID1696856Cytotoxicity in human ASPC1 cells assessed as reduction in cell viability incubated for 72 hrs by MTT assay2020Journal of medicinal chemistry, 10-08, Volume: 63, Issue:19
DPAGT1 Inhibitors of Capuramycin Analogues and Their Antimigratory Activities of Solid Tumors.
AID1917609Inhibition of Staphylococcus aureus MraY assessed as reduction of dansylated lipid I formation using UDP-MurNAc-dansylpentapeptide as substrate incubated for 3 to 4 hrs by fluorescence based analysis2022Bioorganic & medicinal chemistry, 11-01, Volume: 73Synthesis of capuramycin and its analogues via a Ferrier-type I reaction and their biological evaluation.
AID143696Antimycobacterial activity against Mycobacterium avium NIHJ16052003Bioorganic & medicinal chemistry letters, Sep-01, Volume: 13, Issue:17
Synthesis and antimycobacterial activity of capuramycin analogues. Part 2: acylated derivatives of capuramycin-related compounds.
AID1696851Cytotoxicity in human SiHa cells assessed as reduction in cell viability incubated for 72 hrs by MTT assay2020Journal of medicinal chemistry, 10-08, Volume: 63, Issue:19
DPAGT1 Inhibitors of Capuramycin Analogues and Their Antimigratory Activities of Solid Tumors.
AID210950Inhibitory activity against translocase I2003Bioorganic & medicinal chemistry letters, Sep-01, Volume: 13, Issue:17
Synthesis and antimycobacterial activity of capuramycin analogues. Part 1: substitution of the azepan-2-one moiety of capuramycin.
AID144441Antimycobacterial activity against Mycobacterium smegmatis (SANK 75075)2003Bioorganic & medicinal chemistry letters, Sep-01, Volume: 13, Issue:17
Synthesis and antimycobacterial activity of capuramycin analogues. Part 1: substitution of the azepan-2-one moiety of capuramycin.
AID1696854Cytotoxicity in human CAPAN-1 cells assessed as reduction in cell viability incubated for 72 hrs by MTT assay2020Journal of medicinal chemistry, 10-08, Volume: 63, Issue:19
DPAGT1 Inhibitors of Capuramycin Analogues and Their Antimigratory Activities of Solid Tumors.
AID144031Antimycobacterial activity against Mycobacterium intracellular ATCC 1954 E-32003Bioorganic & medicinal chemistry letters, Sep-01, Volume: 13, Issue:17
Synthesis and antimycobacterial activity of capuramycin analogues. Part 2: acylated derivatives of capuramycin-related compounds.
AID1696848Inhibition of human DPAGT1 expressed in HEK293 (Expi293) cells incubated for 2 hrs using UDP-GlcN-Cg-FITC and alpha-dihydroundecap-renyl phosphate by reversed-phase HPLC analysis2020Journal of medicinal chemistry, 10-08, Volume: 63, Issue:19
DPAGT1 Inhibitors of Capuramycin Analogues and Their Antimigratory Activities of Solid Tumors.
AID1917611Antibacterial activity against Mycobacterium smegmatis mc2 155 incubated for 4 days measured by microplate reader method2022Bioorganic & medicinal chemistry, 11-01, Volume: 73Synthesis of capuramycin and its analogues via a Ferrier-type I reaction and their biological evaluation.
AID144143Antimycobacterial activity against Mycobacterium kansasii (ATCC12478)2003Bioorganic & medicinal chemistry letters, Sep-01, Volume: 13, Issue:17
Synthesis and antimycobacterial activity of capuramycin analogues. Part 1: substitution of the azepan-2-one moiety of capuramycin.
AID1696852Cytotoxicity in human HCT-116 cells assessed as reduction in cell viability incubated for 72 hrs by MTT assay2020Journal of medicinal chemistry, 10-08, Volume: 63, Issue:19
DPAGT1 Inhibitors of Capuramycin Analogues and Their Antimigratory Activities of Solid Tumors.
AID1917607Inhibition of bacterial MraY2022Bioorganic & medicinal chemistry, 11-01, Volume: 73Synthesis of capuramycin and its analogues via a Ferrier-type I reaction and their biological evaluation.
AID1917615Antibacterial activity against Staphylococcus aureus2022Bioorganic & medicinal chemistry, 11-01, Volume: 73Synthesis of capuramycin and its analogues via a Ferrier-type I reaction and their biological evaluation.
AID1696858Cytotoxicity in human hTERT-HPNE cells assessed as reduction in cell viability incubated for 72 hrs by MTT assay2020Journal of medicinal chemistry, 10-08, Volume: 63, Issue:19
DPAGT1 Inhibitors of Capuramycin Analogues and Their Antimigratory Activities of Solid Tumors.
AID1917610Antibacterial activity against Mycobacterium tuberculosis H37Rv incubated for 14 days measured by microplate reader method2022Bioorganic & medicinal chemistry, 11-01, Volume: 73Synthesis of capuramycin and its analogues via a Ferrier-type I reaction and their biological evaluation.
AID1696853Cytotoxicity in human DLD-1 cells assessed as reduction in cell viability incubated for 72 hrs by MTT assay2020Journal of medicinal chemistry, 10-08, Volume: 63, Issue:19
DPAGT1 Inhibitors of Capuramycin Analogues and Their Antimigratory Activities of Solid Tumors.
AID1917608Antibacterial activity against Mycobacterium smegmatis2022Bioorganic & medicinal chemistry, 11-01, Volume: 73Synthesis of capuramycin and its analogues via a Ferrier-type I reaction and their biological evaluation.
AID1696859Cytotoxicity in African green monkey Vero cells assessed as reduction in cell viability incubated for 72 hrs by MTT assay2020Journal of medicinal chemistry, 10-08, Volume: 63, Issue:19
DPAGT1 Inhibitors of Capuramycin Analogues and Their Antimigratory Activities of Solid Tumors.
AID1917619Antibacterial activity against Enterobacter species2022Bioorganic & medicinal chemistry, 11-01, Volume: 73Synthesis of capuramycin and its analogues via a Ferrier-type I reaction and their biological evaluation.
AID1696857Cytotoxicity in human PD002 cells assessed as reduction in cell viability incubated for 72 hrs by MTT assay2020Journal of medicinal chemistry, 10-08, Volume: 63, Issue:19
DPAGT1 Inhibitors of Capuramycin Analogues and Their Antimigratory Activities of Solid Tumors.
AID210953Inhibitory concentration against translocase-I2003Bioorganic & medicinal chemistry letters, Sep-01, Volume: 13, Issue:17
Synthesis and antimycobacterial activity of capuramycin analogues. Part 2: acylated derivatives of capuramycin-related compounds.
AID1917616Antibacterial activity against Klebsiella pneumoniae2022Bioorganic & medicinal chemistry, 11-01, Volume: 73Synthesis of capuramycin and its analogues via a Ferrier-type I reaction and their biological evaluation.
AID1696849Cytotoxicity in human L1210 cells assessed as reduction in cell viability incubated for 72 hrs by MTT assay2020Journal of medicinal chemistry, 10-08, Volume: 63, Issue:19
DPAGT1 Inhibitors of Capuramycin Analogues and Their Antimigratory Activities of Solid Tumors.
AID1696847Inhibition of N-terminal His9-tagged Methanocaldococcus jannaschii DSM 2661 AglH incubated for 2 hrs using UDP-GlcN-Cg-FITC and alpha-dihydroundecap-renyl phosphate by reversed-phase HPLC analysis2020Journal of medicinal chemistry, 10-08, Volume: 63, Issue:19
DPAGT1 Inhibitors of Capuramycin Analogues and Their Antimigratory Activities of Solid Tumors.
AID1917612Antibacterial activity against Mycobacterium avium subsp. avium ATCC 25291 incubated for 11 days measured by microplate reader method2022Bioorganic & medicinal chemistry, 11-01, Volume: 73Synthesis of capuramycin and its analogues via a Ferrier-type I reaction and their biological evaluation.
AID1696855Cytotoxicity in human PANC-1 cells assessed as reduction in cell viability incubated for 72 hrs by MTT assay2020Journal of medicinal chemistry, 10-08, Volume: 63, Issue:19
DPAGT1 Inhibitors of Capuramycin Analogues and Their Antimigratory Activities of Solid Tumors.
AID1696842Inhibition of N-terminal 6x-His-tagged Hydrogenivirga-sp. 128-5-R1-1 MraY expressed in Escherichia coli NiCo21(DE3) incubated for 2 hrs by reversed-phase HPLC analysis2020Journal of medicinal chemistry, 10-08, Volume: 63, Issue:19
DPAGT1 Inhibitors of Capuramycin Analogues and Their Antimigratory Activities of Solid Tumors.
AID1917613Antibacterial activity against Mycobacterium abscessus subsp. abscessus ATCC 19977 incubated for 5 days measured by microplate reader method2022Bioorganic & medicinal chemistry, 11-01, Volume: 73Synthesis of capuramycin and its analogues via a Ferrier-type I reaction and their biological evaluation.
AID1696850Cytotoxicity in human KB cells assessed as reduction in cell viability incubated for 72 hrs by MTT assay2020Journal of medicinal chemistry, 10-08, Volume: 63, Issue:19
DPAGT1 Inhibitors of Capuramycin Analogues and Their Antimigratory Activities of Solid Tumors.
AID1917614Antibacterial activity against Enterococcus faecium2022Bioorganic & medicinal chemistry, 11-01, Volume: 73Synthesis of capuramycin and its analogues via a Ferrier-type I reaction and their biological evaluation.
AID144442Antimycobacterial activity was determined against Mycobacterium smegmatis SANK750752003Bioorganic & medicinal chemistry letters, Sep-01, Volume: 13, Issue:17
Synthesis and antimycobacterial activity of capuramycin analogues. Part 2: acylated derivatives of capuramycin-related compounds.
AID1696846Inhibition of Escherichia coli WecA incubated for 2 hrs using UDP-Glucosamine-C6-FITC substrate by by reversed-phase HPLC analysis2020Journal of medicinal chemistry, 10-08, Volume: 63, Issue:19
DPAGT1 Inhibitors of Capuramycin Analogues and Their Antimigratory Activities of Solid Tumors.
AID144030Antimycobacterial activity against Mycobacterium intracellular (ATCC 1954 E-3)2003Bioorganic & medicinal chemistry letters, Sep-01, Volume: 13, Issue:17
Synthesis and antimycobacterial activity of capuramycin analogues. Part 1: substitution of the azepan-2-one moiety of capuramycin.
AID1917617Antibacterial activity against Acinetobacter baumannii2022Bioorganic & medicinal chemistry, 11-01, Volume: 73Synthesis of capuramycin and its analogues via a Ferrier-type I reaction and their biological evaluation.
[information is prepared from bioassay data collected from National Library of Medicine (NLM), extracted Dec-2023]

Research

Studies (29)

TimeframeStudies, This Drug (%)All Drugs %
pre-19901 (3.45)18.7374
1990's0 (0.00)18.2507
2000's12 (41.38)29.6817
2010's13 (44.83)24.3611
2020's3 (10.34)2.80
[information is prepared from research data collected from National Library of Medicine (NLM), extracted Dec-2023]

Market Indicators

Research Demand Index: 18.58

According to the monthly volume, diversity, and competition of internet searches for this compound, as well the volume and growth of publications, there is estimated to be moderate demand-to-supply ratio for research on this compound.

MetricThis Compound (vs All)
Research Demand Index18.58 (24.57)
Research Supply Index3.40 (2.92)
Research Growth Index4.35 (4.65)
Search Engine Demand Index15.26 (26.88)
Search Engine Supply Index2.00 (0.95)

This Compound (18.58)

All Compounds (24.57)

Study Types

Publication TypeThis drug (%)All Drugs (%)
Trials0 (0.00%)5.53%
Reviews1 (3.45%)6.00%
Case Studies0 (0.00%)4.05%
Observational0 (0.00%)0.25%
Other28 (96.55%)84.16%
[information is prepared from research data collected from National Library of Medicine (NLM), extracted Dec-2023]