Page last updated: 2024-12-10

verticillins

Description Research Excerpts Clinical Trials Roles Classes Pathways Study Profile Bioassays Related Drugs Related Conditions Protein Interactions Research Growth Market Indicators

Description

verticillins: 3 antibiotics isolated from imperfect fungus Verticillium: verticillin A, verticillin B (mono-3-hydroxymethyl analog of verticillin A), & verticillin C (differs from verticillin B in that 1 of dioxopiperazine rings has a trisulfide rather than a disulfide bridge; active against gram-positive bacteria & mycobacteria but not against gram-negative bacteria & fungi; RN given refers to cpd with unknown MF; structure (verticillins A & B)) [Medical Subject Headings (MeSH), National Library of Medicine, extracted Dec-2023]

Cross-References

ID SourceID
PubMed CID3084126
CHEMBL ID2172426
SCHEMBL ID20796090
MeSH IDM0054530

Synonyms (16)

Synonym
12795-76-5
unii-bdq3m208xa
bdq3m208xa ,
verticillin
verticillins
11,11'-dideoxyverticillin a
chembl2172426 ,
bdbm50396026
(10b,10'b(11h,11'h)-bi-3,11a-epidithio-11ah-pyrazino(1',2':1,5)pyrrolo(2,3-b)indole)-1,1',4,4'-tetrone, 2,2',3,3',5a,5'a,6,6'-octahydro-2,2',3,3'-tetramethyl-, (3s,3's,5ar,5'ar,10br,10'br,11as,11'as)-
(3s,3's,5ar,5'ar,10br,10'br,11as,11'as)-2,2',3,3',5a,5'a,6,6'-octahydro-2,2',3,3'-tetramethyl(10b,10'b(11h,11'h)-bi-3,11a-epidithio-11ah-pyrazino(1',2':1,5)pyrrolo(2,3-b)indole)-1,1',4,4'-tetrone
L03PG2D98P
zh-4b
(+)-11,11'-dideoxyverticillin a
11,11'-dideoxyverticillin a, (+)-
(1s,3r,11r,14s)-3-[(1s,3r,11r,14s)-14,18-dimethyl-13,17-dioxo-15,16-dithia-10,12,18-triazapentacyclo[12.2.2.01,12.03,11.04,9]octadeca-4,6,8-trien-3-yl]-14,18-dimethyl-15,16-dithia-10,12,18-triazapentacyclo[12.2.2.01,12.03,11.04,9]octadeca-4,6,8-triene-13,
SCHEMBL20796090

Research Excerpts

Overview

Verticillins are a group of epipolythiodioxopiperazine alkaloids that have displayed potent cytotoxicity.

ExcerptReferenceRelevance
"Verticillins are a group of epipolythiodioxopiperazine alkaloids that have displayed potent cytotoxicity. "( Media studies to enhance the production of verticillins facilitated by in situ chemical analysis.
Amrine, CSM; Darveaux, BA; Oberlies, NH; Pearce, CJ; Raja, HA, 2018
)
2.19

Pharmacokinetics

ExcerptReferenceRelevance
" The assay was applied to determine plasma drug concentration in a mouse pharmacokinetic study."( Plasma pharmacokinetics and bioavailability of verticillin A following different routes of administration in mice using liquid chromatography tandem mass spectrometry.
Kolli, S; Oberlies, NH; Pearce, CJ; Phelps, MA; Wang, H; Wang, J; Zhu, X, 2017
)
0.46

Bioavailability

ExcerptReferenceRelevance
" The current study aims to investigate the pharmacokinetics and bioavailability of verticillin A in mice to provide guidance for further efficacy assessment in mouse models."( Plasma pharmacokinetics and bioavailability of verticillin A following different routes of administration in mice using liquid chromatography tandem mass spectrometry.
Kolli, S; Oberlies, NH; Pearce, CJ; Phelps, MA; Wang, H; Wang, J; Zhu, X, 2017
)
0.46
" Tolerability studies to optimize verticillin A formulation for in vivo delivery were performed and compared to a semi-synthetic succinate version of verticillin A to monitor bioavailability in athymic nude females."( Exploration of Verticillins in High-Grade Serous Ovarian Cancer and Evaluation of Multiple Formulations in Preclinical In Vitro and In Vivo Models.
Bazioli, JM; Burdette, JE; Coss, CC; Fuchs, JR; Hill, KL; Kaweesa, EN; Kulp, SK; Lantvit, DD; Oberlies, NH; Pearce, CJ; Phelps, MA; Pierre, HC, 2023
)
1.26

Dosage Studied

ExcerptRelevanceReference
" Moreover, we observed that the loss of cell viability and cell growth inhibition induced by C42 were both time- and dosage dependent."( [11'-Deoxyverticillin A induces caspase-dependent cell apoptosis in PC3M cells].
Ni, Y; Shi, G; Shi, Y; Yang, H; Zhang, Y, 2012
)
0.38
[information is derived through text-mining from research data collected from National Library of Medicine (NLM), extracted Dec-2023]

Protein Targets (2)

Inhibition Measurements

ProteinTaxonomyMeasurementAverageMin (ref.)Avg (ref.)Max (ref.)Bioassay(s)
Histone-lysine N-methyltransferase SUV39H1Homo sapiens (human)IC50 (µMol)0.53000.06600.51401.2000AID700488
Histone-lysine N-methyltransferase EHMT2Homo sapiens (human)IC50 (µMol)0.63000.00251.14809.2000AID700489
[prepared from compound, protein, and bioassay information from National Library of Medicine (NLM), extracted Dec-2023]

Biological Processes (35)

Processvia Protein(s)Taxonomy
negative regulation of transcription by RNA polymerase IIHistone-lysine N-methyltransferase SUV39H1Homo sapiens (human)
DNA damage responseHistone-lysine N-methyltransferase SUV39H1Homo sapiens (human)
cellular response to hypoxiaHistone-lysine N-methyltransferase SUV39H1Homo sapiens (human)
rDNA heterochromatin formationHistone-lysine N-methyltransferase SUV39H1Homo sapiens (human)
chromatin organizationHistone-lysine N-methyltransferase SUV39H1Homo sapiens (human)
rRNA processingHistone-lysine N-methyltransferase SUV39H1Homo sapiens (human)
circadian rhythmHistone-lysine N-methyltransferase SUV39H1Homo sapiens (human)
cell differentiationHistone-lysine N-methyltransferase SUV39H1Homo sapiens (human)
methylationHistone-lysine N-methyltransferase SUV39H1Homo sapiens (human)
cellular response to glucose starvationHistone-lysine N-methyltransferase SUV39H1Homo sapiens (human)
epigenetic programming in the zygotic pronucleiHistone-lysine N-methyltransferase SUV39H1Homo sapiens (human)
negative regulation of cell cycleHistone-lysine N-methyltransferase SUV39H1Homo sapiens (human)
negative regulation of DNA-templated transcriptionHistone-lysine N-methyltransferase SUV39H1Homo sapiens (human)
regulation of transcription by glucoseHistone-lysine N-methyltransferase SUV39H1Homo sapiens (human)
energy homeostasisHistone-lysine N-methyltransferase SUV39H1Homo sapiens (human)
negative regulation of transcription by RNA polymerase IIHistone-lysine N-methyltransferase EHMT2Homo sapiens (human)
cellular response to starvationHistone-lysine N-methyltransferase EHMT2Homo sapiens (human)
regulation of DNA replicationHistone-lysine N-methyltransferase EHMT2Homo sapiens (human)
DNA methylation-dependent heterochromatin formationHistone-lysine N-methyltransferase EHMT2Homo sapiens (human)
synaptonemal complex assemblyHistone-lysine N-methyltransferase EHMT2Homo sapiens (human)
spermatid developmentHistone-lysine N-methyltransferase EHMT2Homo sapiens (human)
long-term memoryHistone-lysine N-methyltransferase EHMT2Homo sapiens (human)
fertilizationHistone-lysine N-methyltransferase EHMT2Homo sapiens (human)
peptidyl-lysine dimethylationHistone-lysine N-methyltransferase EHMT2Homo sapiens (human)
regulation of protein modification processHistone-lysine N-methyltransferase EHMT2Homo sapiens (human)
organ growthHistone-lysine N-methyltransferase EHMT2Homo sapiens (human)
phenotypic switchingHistone-lysine N-methyltransferase EHMT2Homo sapiens (human)
negative regulation of gene expression via chromosomal CpG island methylationHistone-lysine N-methyltransferase EHMT2Homo sapiens (human)
response to ethanolHistone-lysine N-methyltransferase EHMT2Homo sapiens (human)
behavioral response to cocaineHistone-lysine N-methyltransferase EHMT2Homo sapiens (human)
oocyte developmentHistone-lysine N-methyltransferase EHMT2Homo sapiens (human)
neuron fate specificationHistone-lysine N-methyltransferase EHMT2Homo sapiens (human)
response to fungicideHistone-lysine N-methyltransferase EHMT2Homo sapiens (human)
cellular response to cocaineHistone-lysine N-methyltransferase EHMT2Homo sapiens (human)
cellular response to xenobiotic stimulusHistone-lysine N-methyltransferase EHMT2Homo sapiens (human)
negative regulation of autophagosome assemblyHistone-lysine N-methyltransferase EHMT2Homo sapiens (human)
negative regulation of transcription by RNA polymerase IIHistone-lysine N-methyltransferase EHMT2Homo sapiens (human)
[Information is prepared from geneontology information from the June-17-2024 release]

Molecular Functions (19)

Processvia Protein(s)Taxonomy
transcription cis-regulatory region bindingHistone-lysine N-methyltransferase SUV39H1Homo sapiens (human)
chromatin bindingHistone-lysine N-methyltransferase SUV39H1Homo sapiens (human)
protein bindingHistone-lysine N-methyltransferase SUV39H1Homo sapiens (human)
zinc ion bindingHistone-lysine N-methyltransferase SUV39H1Homo sapiens (human)
S-adenosylmethionine-dependent methyltransferase activityHistone-lysine N-methyltransferase SUV39H1Homo sapiens (human)
histone methyltransferase activityHistone-lysine N-methyltransferase SUV39H1Homo sapiens (human)
histone H3K9 methyltransferase activityHistone-lysine N-methyltransferase SUV39H1Homo sapiens (human)
histone H3 methyltransferase activityHistone-lysine N-methyltransferase SUV39H1Homo sapiens (human)
histone H3K9 trimethyltransferase activityHistone-lysine N-methyltransferase SUV39H1Homo sapiens (human)
RNA polymerase II transcription regulatory region sequence-specific DNA bindingHistone-lysine N-methyltransferase EHMT2Homo sapiens (human)
transcription corepressor bindingHistone-lysine N-methyltransferase EHMT2Homo sapiens (human)
p53 bindingHistone-lysine N-methyltransferase EHMT2Homo sapiens (human)
protein bindingHistone-lysine N-methyltransferase EHMT2Homo sapiens (human)
zinc ion bindingHistone-lysine N-methyltransferase EHMT2Homo sapiens (human)
protein-lysine N-methyltransferase activityHistone-lysine N-methyltransferase EHMT2Homo sapiens (human)
enzyme bindingHistone-lysine N-methyltransferase EHMT2Homo sapiens (human)
histone H3K9 methyltransferase activityHistone-lysine N-methyltransferase EHMT2Homo sapiens (human)
histone H3K27 methyltransferase activityHistone-lysine N-methyltransferase EHMT2Homo sapiens (human)
C2H2 zinc finger domain bindingHistone-lysine N-methyltransferase EHMT2Homo sapiens (human)
histone H3K56 methyltransferase activityHistone-lysine N-methyltransferase EHMT2Homo sapiens (human)
histone H3K9me2 methyltransferase activityHistone-lysine N-methyltransferase EHMT2Homo sapiens (human)
promoter-specific chromatin bindingHistone-lysine N-methyltransferase EHMT2Homo sapiens (human)
[Information is prepared from geneontology information from the June-17-2024 release]

Ceullar Components (14)

Processvia Protein(s)Taxonomy
nucleusHistone-lysine N-methyltransferase SUV39H1Homo sapiens (human)
chromosome, centromeric regionHistone-lysine N-methyltransferase SUV39H1Homo sapiens (human)
condensed nuclear chromosomeHistone-lysine N-methyltransferase SUV39H1Homo sapiens (human)
nucleusHistone-lysine N-methyltransferase SUV39H1Homo sapiens (human)
nuclear laminaHistone-lysine N-methyltransferase SUV39H1Homo sapiens (human)
nucleoplasmHistone-lysine N-methyltransferase SUV39H1Homo sapiens (human)
nucleolusHistone-lysine N-methyltransferase SUV39H1Homo sapiens (human)
plasma membraneHistone-lysine N-methyltransferase SUV39H1Homo sapiens (human)
cytoplasmic vesicleHistone-lysine N-methyltransferase SUV39H1Homo sapiens (human)
eNoSc complexHistone-lysine N-methyltransferase SUV39H1Homo sapiens (human)
heterochromatinHistone-lysine N-methyltransferase SUV39H1Homo sapiens (human)
chromatin silencing complexHistone-lysine N-methyltransferase SUV39H1Homo sapiens (human)
rDNA heterochromatinHistone-lysine N-methyltransferase SUV39H1Homo sapiens (human)
nucleusHistone-lysine N-methyltransferase EHMT2Homo sapiens (human)
nucleoplasmHistone-lysine N-methyltransferase EHMT2Homo sapiens (human)
nuclear speckHistone-lysine N-methyltransferase EHMT2Homo sapiens (human)
chromatinHistone-lysine N-methyltransferase EHMT2Homo sapiens (human)
nucleusHistone-lysine N-methyltransferase EHMT2Homo sapiens (human)
[Information is prepared from geneontology information from the June-17-2024 release]

Bioassays (2)

Assay IDTitleYearJournalArticle
AID700489Inhibition of G9a2012European journal of medicinal chemistry, Oct, Volume: 56Oncoepigenomics: making histone lysine methylation count.
AID700488Inhibition of SUV39H12012European journal of medicinal chemistry, Oct, Volume: 56Oncoepigenomics: making histone lysine methylation count.
[information is prepared from bioassay data collected from National Library of Medicine (NLM), extracted Dec-2023]

Research

Studies (25)

TimeframeStudies, This Drug (%)All Drugs %
pre-19900 (0.00)18.7374
1990's0 (0.00)18.2507
2000's4 (16.00)29.6817
2010's17 (68.00)24.3611
2020's4 (16.00)2.80
[information is prepared from research data collected from National Library of Medicine (NLM), extracted Dec-2023]

Market Indicators

Research Demand Index: 11.94

According to the monthly volume, diversity, and competition of internet searches for this compound, as well the volume and growth of publications, there is estimated to be weak demand-to-supply ratio for research on this compound.

MetricThis Compound (vs All)
Research Demand Index11.94 (24.57)
Research Supply Index3.26 (2.92)
Research Growth Index5.20 (4.65)
Search Engine Demand Index0.00 (26.88)
Search Engine Supply Index0.00 (0.95)

This Compound (11.94)

All Compounds (24.57)

Study Types

Publication TypeThis drug (%)All Drugs (%)
Trials0 (0.00%)5.53%
Reviews2 (8.00%)6.00%
Case Studies0 (0.00%)4.05%
Observational0 (0.00%)0.25%
Other23 (92.00%)84.16%
[information is prepared from research data collected from National Library of Medicine (NLM), extracted Dec-2023]