Page last updated: 2024-11-04

cyclic amp

Description Research Excerpts Clinical Trials Roles Classes Pathways Study Profile Bioassays Related Drugs Related Conditions Protein Interactions Research Growth

Description

3',5'-cyclic AMP(1-) : An organophosphate oxoanion that is the conjugate base of 3',5'-cyclic AMP arising from deprotonation of the free phosphate OH group; major species at pH 7.3. [Chemical Entities of Biological Interest (ChEBI), Hastings J, Owen G, Dekker A, Ennis M, Kale N, Muthukrishnan V, Turner S, Swainston N, Mendes P, Steinbeck C. (2016). ChEBI in 2016: Improved services and an expanding collection of metabolites. Nucleic Acids Res]

Cross-References

ID SourceID
PubMed CID7059571
CHEBI ID58165
MeSH IDM0000378

Synonyms (34)

Synonym
smr000875274
adenosine 3',5'-cyclic monophosphate sodium salt monohydrate
MLS001333136 ,
adenosine cyclic-3',5'-monophosphate
adenosine-3',5'-monophosphate
60-92-4
cyclic-3',5'-adenosine monophosphate
adenosine-3',5'-cyclic monophosphate
cyclic-amp
(1s,6r,8r,9r)-8-(6-aminopurin-9-yl)-3-hydroxy-3-oxo-2,4,7-trioxa-3?5-phosphabicyclo[4.3.0]nonan-9-ol
3CLP
3',5'-cyclic amp anion
adenosine 3',5'-cyclic monophosphate anion
adenosine 3',5'-cyclic monophosphate(1-)
3',5'-cyclic amp(1-)
CHEBI:58165
(4ar,6r,7r,7as)-6-(6-aminopurin-9-yl)-2-oxidanidyl-2-oxidanylidene-4a,6,7,7a-tetrahydro-4h-furo[3,2-d][1,3,2]dioxaphosphinin-7-ol
A832959
(4ar,6r,7r,7as)-6-(6-aminopurin-9-yl)-2-oxido-2-oxo-4a,6,7,7a-tetrahydro-4h-furo[3,2-d][1,3,2]dioxaphosphorin-7-ol
(4ar,6r,7r,7as)-6-(6-aminopurin-9-yl)-2-oxido-2-oxo-4a,6,7,7a-tetrahydro-4h-furo[3,2-d][1,3,2]dioxaphosphinin-7-ol
3U10
3OTF
3OCP
2K0G
sodium;(4ar,6r,7r,7as)-6-(6-aminopurin-9-yl)-2-oxido-2-oxo-4a,6,7,7a-tetrahydro-4h-furo[3,2-d][1,3,2]dioxaphosphorin-7-ol
sodium;(4ar,6r,7r,7as)-6-adenin-9-yl-2-keto-2-oxido-4a,6,7,7a-tetrahydro-4h-furo[3,2-d][1,3,2]dioxaphosphorin-7-ol
sodium;(4ar,6r,7r,7as)-6-(6-aminopurin-9-yl)-2-oxidanidyl-2-oxidanylidene-4a,6,7,7a-tetrahydro-4h-furo[3,2-d][1,3,2]dioxaphosphinin-7-ol
cid_23669773
bdbm81289
NCGC00485221-01
Q27125416
DTXSID501214160
62906-31-4
adenosine, cyclic 3',5'-(hydrogen phosphate), ion(1-)

Research Excerpts

Bioavailability

ExcerptReferenceRelevance
"The ATP-binding cassette transporter P-glycoprotein (P-gp) is known to limit both brain penetration and oral bioavailability of many chemotherapy drugs."( A High-Throughput Screen of a Library of Therapeutics Identifies Cytotoxic Substrates of P-glycoprotein.
Ambudkar, SV; Brimacombe, KR; Chen, L; Gottesman, MM; Guha, R; Hall, MD; Klumpp-Thomas, C; Lee, OW; Lee, TD; Lusvarghi, S; Robey, RW; Shen, M; Tebase, BG, 2019
)
0.51
[information is derived through text-mining from research data collected from National Library of Medicine (NLM), extracted Dec-2023]

Roles (2)

RoleDescription
human metaboliteAny mammalian metabolite produced during a metabolic reaction in humans (Homo sapiens).
Saccharomyces cerevisiae metaboliteAny fungal metabolite produced during a metabolic reaction in Baker's yeast (Saccharomyces cerevisiae).
[role information is derived from Chemical Entities of Biological Interest (ChEBI), Hastings J, Owen G, Dekker A, Ennis M, Kale N, Muthukrishnan V, Turner S, Swainston N, Mendes P, Steinbeck C. (2016). ChEBI in 2016: Improved services and an expanding collection of metabolites. Nucleic Acids Res]

Drug Classes (1)

ClassDescription
organophosphate oxoanionAn organic phosphoric acid derivative in which one or more oxygen atoms of the phosphate group(s) has been deprotonated.
[compound class information is derived from Chemical Entities of Biological Interest (ChEBI), Hastings J, Owen G, Dekker A, Ennis M, Kale N, Muthukrishnan V, Turner S, Swainston N, Mendes P, Steinbeck C. (2016). ChEBI in 2016: Improved services and an expanding collection of metabolites. Nucleic Acids Res]

Pathways (86)

PathwayProteinsCompounds
Glycolysis6132
Transport of small molecules39295
Aquaporin-mediated transport1811
Vasopressin regulates renal water homeostasis via Aquaporins99
Metabolism14961108
Carbohydrate metabolism173120
Glucose metabolism7642
Integration of energy metabolism4927
Regulation of insulin secretion3019
Glucagon-like Peptide-1 (GLP1) regulates insulin secretion97
Glucagon signaling in metabolic regulation26
PKA activation in glucagon signalling05
Signaling Pathways1269117
Signaling by Receptor Tyrosine Kinases29335
Signaling by Insulin receptor169
Insulin receptor signalling cascade108
IRS-mediated signalling67
PI3K Cascade45
PKB-mediated events25
PDE3B signalling25
Signaling by Type 1 Insulin-like Growth Factor 1 Receptor (IGF1R)97
IGF1R signaling cascade87
IRS-related events triggered by IGF1R87
Signaling by GPCR24955
GPCR downstream signalling17252
G alpha (s) signalling events1011
Olfactory Signaling Pathway8028
G alpha (i) signalling events8741
Opioid Signalling2319
G-protein mediated events1615
PLC beta mediated events1514
Ca-dependent events149
CaM pathway128
Calmodulin induced events128
PKA-mediated phosphorylation of CREB46
PKA activation35
Cam-PDE 1 activation44
Adenylate cyclase activating pathway17
DARPP-32 events711
G alpha (z) signalling events19
Signaling by Hedgehog9311
Hedgehog 'off' state676
Intracellular signaling by second messengers12614
DAG and IP3 signaling1410
Neuronal System16650
Transmission across Chemical Synapses12250
Neurotransmitter receptors and postsynaptic signal transmission7820
Activation of NMDA receptors and postsynaptic events4013
Post NMDA receptor activation events228
CREB1 phosphorylation through the activation of Adenylate Cyclase25
Potassium Channels244
HCN channels42
Disease1278231
Infectious disease89579
Uptake and actions of bacterial toxins389
Uptake and function of anthrax toxins126
Immune System91482
Adaptive Immune System26424
Rap1 signalling27
guanosine nucleotides degradation II125
adenosine nucleotides degradation I327
superpathway of purines degradation in plants745
superpathway of guanosine nucleotides degradation (plants)227
guanosine nucleotides degradation I226
purine nucleotides degradation I (plants)334
Major receptors targeted by epinephrine and norepinephrine186
Leishmania infection6626
Leishmania parasite growth and survival2018
Anti-inflammatory response favouring Leishmania parasite infection2018
FCGR3A-mediated IL10 synthesis79
ADORA2B mediated anti-inflammatory cytokines production48
Renz2020 - GEM of Human alveolar macrophage with SARS-CoV-20490
Sensory Perception21568
GPER1 signaling57
Bacterial Infection Pathways12347
Parasitic Infection Pathways6626
15q25 copy number variation08
superpathway of microbial D-galacturonate and D-glucuronate degradation3592
adenosine nucleotides degradation I227
purine nucleotides degradation I (plants)234
hexitol fermentation to lactate, formate, ethanol and acetate736
superpathway of anaerobic energy metabolism (invertebrates)1660
anaerobic energy metabolism (invertebrates, cytosol)329
gluconeogenesis I2862
xylitol degradation612
glycolysis II (from fructose 6-phosphate)2149
D-galacturonate degradation II426
superpathway of purines degradation in plants645
cyclic AMP biosynthesis588

Protein Targets (6)

Activation Measurements

ProteinTaxonomyMeasurementAverageMin (ref.)Avg (ref.)Max (ref.)Bioassay(s)
Chain A, Mll3241 proteinMesorhizobium lotiKd0.10700.10700.10700.1070AID977611
Chain A, Mll3241 proteinunidentifiedKd205.1000205.1000205.1000205.1000AID977611
Chain A, PRKG1 proteinHomo sapiens (human)Kd0.02700.02700.02700.0270AID977611
Chain A, PRKG1 proteinHomo sapiens (human)Kd0.02700.02700.02700.0270AID977611
Chain A, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4Homo sapiens (human)Kd0.83000.83000.83000.8300AID977611
Chain A, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2Homo sapiens (human)Kd3.60003.60003.60003.6000AID977611
[prepared from compound, protein, and bioassay information from National Library of Medicine (NLM), extracted Dec-2023]

Bioassays (11)

Assay IDTitleYearJournalArticle
AID1296008Cytotoxic Profiling of Annotated Libraries Using Quantitative High-Throughput Screening2020SLAS discovery : advancing life sciences R & D, 01, Volume: 25, Issue:1
Cytotoxic Profiling of Annotated and Diverse Chemical Libraries Using Quantitative High-Throughput Screening.
AID1346986P-glycoprotein substrates identified in KB-3-1 adenocarcinoma cell line, qHTS therapeutic library screen2019Molecular pharmacology, 11, Volume: 96, Issue:5
A High-Throughput Screen of a Library of Therapeutics Identifies Cytotoxic Substrates of P-glycoprotein.
AID1347159Primary screen GU Rhodamine qHTS for Zika virus inhibitors: Unlinked NS2B-NS3 protease assay2020Proceedings of the National Academy of Sciences of the United States of America, 12-08, Volume: 117, Issue:49
Therapeutic candidates for the Zika virus identified by a high-throughput screen for Zika protease inhibitors.
AID1346987P-glycoprotein substrates identified in KB-8-5-11 adenocarcinoma cell line, qHTS therapeutic library screen2019Molecular pharmacology, 11, Volume: 96, Issue:5
A High-Throughput Screen of a Library of Therapeutics Identifies Cytotoxic Substrates of P-glycoprotein.
AID1347160Primary screen NINDS Rhodamine qHTS for Zika virus inhibitors2020Proceedings of the National Academy of Sciences of the United States of America, 12-08, Volume: 117, Issue:49
Therapeutic candidates for the Zika virus identified by a high-throughput screen for Zika protease inhibitors.
AID977611Experimentally measured binding affinity data (Kd) for protein-ligand complexes derived from PDB2011PloS one, Apr-19, Volume: 6, Issue:4
Co-crystal structures of PKG Iβ (92-227) with cGMP and cAMP reveal the molecular details of cyclic-nucleotide binding.
AID977611Experimentally measured binding affinity data (Kd) for protein-ligand complexes derived from PDB2010The Journal of biological chemistry, Nov-19, Volume: 285, Issue:47
Structural basis for the cAMP-dependent gating in the human HCN4 channel.
AID1159607Screen for inhibitors of RMI FANCM (MM2) intereaction2016Journal of biomolecular screening, Jul, Volume: 21, Issue:6
A High-Throughput Screening Strategy to Identify Protein-Protein Interaction Inhibitors That Block the Fanconi Anemia DNA Repair Pathway.
AID977611Experimentally measured binding affinity data (Kd) for protein-ligand complexes derived from PDB2009EMBO reports, Jul, Volume: 10, Issue:7
Solution structure of the Mesorhizobium loti K1 channel cyclic nucleotide-binding domain in complex with cAMP.
AID977611Experimentally measured binding affinity data (Kd) for protein-ligand complexes derived from PDB2011The Journal of biological chemistry, Dec-30, Volume: 286, Issue:52
Tetramerization dynamics of C-terminal domain underlies isoform-specific cAMP gating in hyperpolarization-activated cyclic nucleotide-gated channels.
AID977611Experimentally measured binding affinity data (Kd) for protein-ligand complexes derived from PDB2008Journal of molecular biology, Sep-05, Volume: 381, Issue:3
Structural and energetic analysis of activation by a cyclic nucleotide binding domain.
[information is prepared from bioassay data collected from National Library of Medicine (NLM), extracted Dec-2023]

Research

Studies (9)

TimeframeStudies, This Drug (%)All Drugs %
pre-19900 (0.00)18.7374
1990's0 (0.00)18.2507
2000's2 (22.22)29.6817
2010's5 (55.56)24.3611
2020's2 (22.22)2.80
[information is prepared from research data collected from National Library of Medicine (NLM), extracted Dec-2023]

Study Types

Publication TypeThis drug (%)All Drugs (%)
Trials0 (0.00%)5.53%
Reviews0 (0.00%)6.00%
Case Studies0 (0.00%)4.05%
Observational0 (0.00%)0.25%
Other9 (100.00%)84.16%
[information is prepared from research data collected from National Library of Medicine (NLM), extracted Dec-2023]