| PC4 and SFRS1-interacting protein | CLL-associated antigen KW-7; Dense fine speckles 70 kDa protein; DFS 70; Lens epithelium-derived growth factor; Transcriptional coactivator p75/p52 | Homo sapiens (human) |
| Barrier-to-autointegration factor | Breakpoint cluster region protein 1 | Homo sapiens (human) |
| Gag-Pol polyprotein | Pr160Gag-Pol | HIV-1 M:B_HXB2R |
| Transcription initiation factor IIA subunit 1 | General transcription factor IIA subunit 1; TFIIAL; Transcription initiation factor TFIIA 42 kDa subunit; TFIIA-42 | Homo sapiens (human) |
| Cyclin-dependent kinase 7 | EC 2.7.11.22; EC 2.7.11.23; 39 kDa protein kinase; p39 Mo15; CDK-activating kinase 1; Cell division protein kinase 7; Serine/threonine-protein kinase 1; TFIIH basal transcription factor complex kinase subunit | Homo sapiens (human) |
| Cyclin-dependent kinase 9 | EC 2.7.11.22; EC 2.7.11.23; C-2K; Cell division cycle 2-like protein kinase 4; Cell division protein kinase 9; Serine/threonine-protein kinase PITALRE; Tat-associated kinase complex catalytic subunit | Homo sapiens (human) |
| Cyclin-H | MO15-associated protein; p34; p37 | Homo sapiens (human) |
| Protein Rev | ART/TRS; Anti-repression transactivator; Regulator of expression of viral proteins | HIV-1 M:B_HXB2R |
| General transcription and DNA repair factor IIH helicase subunit XPB | TFIIH subunit XPB; EC 3.6.4.12; Basic transcription factor 2 89 kDa subunit; BTF2 p89; DNA excision repair protein ERCC-3; DNA repair protein complementing XP-B cells; TFIIH basal transcription factor complex 89 kDa subunit; TFIIH 89 kDa subunit; TFIIH p8 | Homo sapiens (human) |
| Transcription initiation factor TFIID subunit 11 | TFIID subunit p30-beta; Transcription initiation factor TFIID 28 kDa subunit; TAF(II)28; TAFII-28; TAFII28 | Homo sapiens (human) |
| Transcription initiation factor TFIID subunit 3 | 140 kDa TATA box-binding protein-associated factor; TBP-associated factor 3; Transcription initiation factor TFIID 140 kDa subunit; TAF(II)140; TAF140; TAFII-140; TAFII140 | Homo sapiens (human) |
| Cyclin-T1 | CycT1; Cyclin-T | Homo sapiens (human) |
| Furin | EC 3.4.21.75; Dibasic-processing enzyme; Paired basic amino acid residue-cleaving enzyme; PACE | Homo sapiens (human) |
| DNA repair protein XRCC4 | X-ray repair cross-complementing protein 4 | Homo sapiens (human) |
| Exportin-1 | Exp1; Chromosome region maintenance 1 protein homolog | Homo sapiens (human) |
| Protein Tat | Transactivating regulatory protein | HIV-1 M:B_HXB2R |
| T-cell surface glycoprotein CD4 | T-cell surface antigen T4/Leu-3 | Homo sapiens (human) |
| Elongin-C | EloC; Elongin 15 kDa subunit; RNA polymerase II transcription factor SIII subunit C; SIII p15; Transcription elongation factor B polypeptide 1 | Homo sapiens (human) |
| Glycylpeptide N-tetradecanoyltransferase 2 | EC 2.3.1.97; Myristoyl-CoA:protein N-myristoyltransferase 2; NMT 2; Peptide N-myristoyltransferase 2; Type II N-myristoyltransferase | Homo sapiens (human) |
| Envelope glycoprotein gp160 | Env polyprotein | HIV-1 M:B_HXB2R |
| DNA ligase 1 | EC 6.5.1.1; DNA ligase I; Polydeoxyribonucleotide synthase [ATP] 1 | Homo sapiens (human) |
| Glycylpeptide N-tetradecanoyltransferase 1 | EC 2.3.1.97; Myristoyl-CoA:protein N-myristoyltransferase 1; NMT 1; Type I N-myristoyltransferase; Peptide N-myristoyltransferase 1 | Homo sapiens (human) |
| Peptidyl-prolyl cis-trans isomerase A | PPIase A; EC 5.2.1.8; Cyclophilin A; Cyclosporin A-binding protein; Rotamase A | Homo sapiens (human) |
| Tumor susceptibility gene 101 protein | ESCRT-I complex subunit TSG101 | Homo sapiens (human) |
| Flap endonuclease 1 | FEN-1; EC 3.1.-.-; DNase IV; Flap structure-specific endonuclease 1; Maturation factor 1; MF1; hFEN-1 | Homo sapiens (human) |
| General transcription and DNA repair factor IIH helicase subunit XPD | TFIIH subunit XPD; EC 3.6.4.12; Basic transcription factor 2 80 kDa subunit; BTF2 p80; CXPD; DNA excision repair protein ERCC-2; DNA repair protein complementing XP-D cells; TFIIH basal transcription factor complex 80 kDa subunit; TFIIH 80 kDa subunit; TF | Homo sapiens (human) |
| Ran GTPase-activating protein 1 | RanGAP1 | Homo sapiens (human) |
| E3 SUMO-protein ligase RanBP2 | EC 2.3.2.-; 358 kDa nucleoporin; Nuclear pore complex protein Nup358; Nucleoporin Nup358; Ran-binding protein 2; RanBP2; p270 | Homo sapiens (human) |
| Virion infectivity factor | Vif; SOR protein | HIV-1 M:B_HXB2R |
| Vacuolar protein sorting-associated protein 4B | EC 3.6.4.6; Cell migration-inducing gene 1 protein; Suppressor of K(+) transport growth defect 1; Protein SKD1 | Homo sapiens (human) |
| CDK-activating kinase assembly factor MAT1 | CDK7/cyclin-H assembly factor; Cyclin-G1-interacting protein; Menage a trois; RING finger protein 66; RING finger protein MAT1; p35; p36 | Homo sapiens (human) |
| Elongin-B | EloB; Elongin 18 kDa subunit; RNA polymerase II transcription factor SIII subunit B; SIII p18; Transcription elongation factor B polypeptide 2 | Homo sapiens (human) |
| mRNA cap guanine-N7 methyltransferase | EC 2.1.1.56; RG7MT1; mRNA (guanine-N(7)-)-methyltransferase; mRNA cap methyltransferase; hCMT1; hMet; hcm1p | Homo sapiens (human) |
| Nuclear pore complex protein Nup155 | 155 kDa nucleoporin; Nucleoporin Nup155 | Homo sapiens (human) |
| X-ray repair cross-complementing protein 6 | EC 3.6.4.-; EC 4.2.99.-; 5'-deoxyribose-5-phosphate lyase Ku70; 5'-dRP lyase Ku70; 70 kDa subunit of Ku antigen; ATP-dependent DNA helicase 2 subunit 1; ATP-dependent DNA helicase II 70 kDa subunit; CTC box-binding factor 75 kDa subunit; CTC75; CTCBF; DNA | Homo sapiens (human) |
| GTP-binding nuclear protein Ran | Androgen receptor-associated protein 24; GTPase Ran; Ras-like protein TC4; Ras-related nuclear protein | Homo sapiens (human) |
| Transcription elongation factor SPT5 | hSPT5; DRB sensitivity-inducing factor 160 kDa subunit; DSIF p160; DRB sensitivity-inducing factor large subunit; DSIF large subunit; Tat-cotransactivator 1 protein; Tat-CT1 protein | Homo sapiens (human) |
| DNA-directed RNA polymerase II subunit RPB1 | RNA polymerase II subunit B1; EC 2.7.7.6; DNA-directed RNA polymerase II subunit A; DNA-directed RNA polymerase III largest subunit; RNA-directed RNA polymerase II subunit RPB1; 2.7.7.48 | Homo sapiens (human) |
| X-ray repair cross-complementing protein 5 | EC 3.6.4.-; 86 kDa subunit of Ku antigen; ATP-dependent DNA helicase 2 subunit 2; ATP-dependent DNA helicase II 80 kDa subunit; CTC box-binding factor 85 kDa subunit; CTC85; CTCBF; DNA repair protein XRCC5; Ku80; Ku86; Lupus Ku autoantigen protein p86; Nu | Homo sapiens (human) |
| DNA ligase 4 | EC 6.5.1.1; DNA ligase IV; Polydeoxyribonucleotide synthase [ATP] 4 | Homo sapiens (human) |
| Ran-specific GTPase-activating protein | Ran-binding protein 1; RanBP1 | Homo sapiens (human) |
| Charged multivesicular body protein 6 | Chromatin-modifying protein 6; Vacuolar protein sorting-associated protein 20; Vps20; hVps20 | Homo sapiens (human) |
| Charged multivesicular body protein 5 | Chromatin-modifying protein 5; SNF7 domain-containing protein 2; Vacuolar protein sorting-associated protein 60; Vps60; hVps60 | Homo sapiens (human) |
| Vacuolar protein sorting-associated protein VTA1 homolog | Dopamine-responsive gene 1 protein; DRG-1; LYST-interacting protein 5; LIP5; SKD1-binding protein 1; SBP1 | Homo sapiens (human) |
| RNA polymerase II elongation factor ELL | Eleven-nineteen lysine-rich leukemia protein | Homo sapiens (human) |
| Nuclear pore complex protein Nup88 | 88 kDa nucleoporin; Nucleoporin Nup88 | Homo sapiens (human) |
| Vacuolar protein sorting-associated protein 4A | EC 3.6.4.6; Protein SKD2; VPS4-1; hVPS4 | Homo sapiens (human) |
| Nuclear cap-binding protein subunit 2 | 20 kDa nuclear cap-binding protein; Cell proliferation-inducing gene 55 protein; NCBP 20 kDa subunit; CBP20; NCBP-interacting protein 1; NIP1 | Homo sapiens (human) |
| Importin subunit alpha-5 | Karyopherin subunit alpha-1; Nucleoprotein interactor 1; NPI-1; RAG cohort protein 2; SRP1-beta | Homo sapiens (human) |
| DNA-directed RNA polymerases I, II, and III subunit RPABC4 | RNA polymerases I, II, and III subunit ABC4; ABC10-alpha; DNA-directed RNA polymerase II subunit K; RNA polymerase II 7.0 kDa subunit; RPB7.0; RPB10alpha | Homo sapiens (human) |
| mRNA export factor | Rae1 protein homolog; mRNA-associated protein mrnp 41 | Homo sapiens (human) |
| Nuclear pore membrane glycoprotein 210 | Nuclear pore protein gp210; Nuclear envelope pore membrane protein POM 210; POM210; Nucleoporin Nup210; Pore membrane protein of 210 kDa | Homo sapiens (human) |
| Transcription initiation factor TFIID subunit 4 | RNA polymerase II TBP-associated factor subunit C; TBP-associated factor 4; Transcription initiation factor TFIID 130 kDa subunit; TAF(II)130; TAFII-130; TAFII130; Transcription initiation factor TFIID 135 kDa subunit; TAF(II)135; TAFII-135; TAFII135 | Homo sapiens (human) |
| Nucleoporin NUP42 | NLP-1; NUP42 homolog; Nucleoporin hCG1; Nucleoporin-42; Nucleoporin-like protein 2 | Homo sapiens (human) |
| DNA-directed RNA polymerase II subunit RPB4 | RNA polymerase II subunit B4; DNA-directed RNA polymerase II subunit D; RNA polymerase II 16 kDa subunit; RPB16 | Homo sapiens (human) |
| mRNA-capping enzyme | HCAP1; HCE | Homo sapiens (human) |
| Nucleoprotein TPR | Megator; NPC-associated intranuclear protein; Translocated promoter region protein | Homo sapiens (human) |
| General transcription factor IIF subunit 2 | EC 3.6.4.12; ATP-dependent helicase GTF2F2; General transcription factor IIF 30 kDa subunit; Transcription initiation factor IIF subunit beta; TFIIF-beta; Transcription initiation factor RAP30 | Homo sapiens (human) |
| High mobility group protein HMG-I/HMG-Y | HMG-I(Y); High mobility group AT-hook protein 1; High mobility group protein A1; High mobility group protein R | Homo sapiens (human) |
| Negative elongation factor E | NELF-E; RNA-binding protein RD | Homo sapiens (human) |
| Regulator of chromosome condensation | Cell cycle regulatory protein; Chromosome condensation protein 1 | Homo sapiens (human) |
| DNA-directed RNA polymerase II subunit RPB3 | RNA polymerase II subunit 3; RNA polymerase II subunit B3; DNA-directed RNA polymerase II 33 kDa polypeptide; RPB33; DNA-directed RNA polymerase II subunit C; RPB31 | Homo sapiens (human) |
| DNA-directed RNA polymerases I, II, and III subunit RPABC1 | RNA polymerases I, II, and III subunit ABC1; DNA-directed RNA polymerase II 23 kDa polypeptide; DNA-directed RNA polymerase II subunit E; RPB5 homolog; XAP4 | Homo sapiens (human) |
| TATA-box-binding protein | TATA sequence-binding protein; TATA-binding factor; TATA-box factor; Transcription initiation factor TFIID TBP subunit | Homo sapiens (human) |
| Transcription elongation factor A protein 1 | Transcription elongation factor S-II protein 1; Transcription elongation factor TFIIS.o | Homo sapiens (human) |
| General transcription factor IIE subunit 1 | General transcription factor IIE 56 kDa subunit; Transcription initiation factor IIE subunit alpha; TFIIE-alpha | Homo sapiens (human) |
| Transcription initiation factor IIE subunit beta | TFIIE-beta; General transcription factor IIE subunit 2 | Homo sapiens (human) |
| DNA-directed RNA polymerase II subunit RPB2 | EC 2.7.7.6; DNA-directed RNA polymerase II 140 kDa polypeptide; DNA-directed RNA polymerase II subunit B; RNA polymerase II subunit 2; RNA polymerase II subunit B2 | Homo sapiens (human) |
| General transcription factor IIH subunit 1 | Basic transcription factor 2 62 kDa subunit; BTF2 p62; General transcription factor IIH polypeptide 1; TFIIH basal transcription factor complex p62 subunit | Homo sapiens (human) |
| General transcription factor IIF subunit 1 | General transcription factor IIF 74 kDa subunit; Transcription initiation factor IIF subunit alpha; TFIIF-alpha; Transcription initiation factor RAP74 | Homo sapiens (human) |
| Nuclear pore complex protein Nup214 | 214 kDa nucleoporin; Nucleoporin Nup214; Protein CAN | Homo sapiens (human) |
| DNA-directed RNA polymerase II subunit RPB9 | RNA polymerase II subunit B9; DNA-directed RNA polymerase II subunit I; RNA polymerase II 14.5 kDa subunit; RPB14.5 | Homo sapiens (human) |
| Nuclear pore glycoprotein p62 | 62 kDa nucleoporin; Nucleoporin Nup62 | Homo sapiens (human) |
| Nuclear pore complex protein Nup153 | 153 kDa nucleoporin; Nucleoporin Nup153 | Homo sapiens (human) |
| Transcription initiation factor TFIID subunit 6 | RNA polymerase II TBP-associated factor subunit E; Transcription initiation factor TFIID 70 kDa subunit; TAF(II)70; TAFII-70; TAFII70; Transcription initiation factor TFIID 80 kDa subunit; TAF(II)80; TAFII-80; TAFII80 | Homo sapiens (human) |
| DNA-directed RNA polymerases I, II, and III subunit RPABC3 | RNA polymerases I, II, and III subunit ABC3; DNA-directed RNA polymerase II subunit H; DNA-directed RNA polymerases I, II, and III 17.1 kDa polypeptide; RPB17; RPB8 homolog; hRPB8 | Homo sapiens (human) |
| DNA-directed RNA polymerase II subunit RPB11-a | RNA polymerase II subunit B11-a; RPB11a; DNA-directed RNA polymerase II subunit J-1; RNA polymerase II 13.3 kDa subunit | Homo sapiens (human) |
| Transcription initiation factor IIA subunit 2 | General transcription factor IIA subunit 2; TFIIA p12 subunit; TFIIA-12; TFIIAS; Transcription initiation factor IIA gamma chain; TFIIA-gamma | Homo sapiens (human) |
| Protein SEC13 homolog | GATOR complex protein SEC13; SEC13-like protein 1; SEC13-related protein | Homo sapiens (human) |
| Nuclear pore complex protein Nup107 | 107 kDa nucleoporin; Nucleoporin Nup107 | Homo sapiens (human) |
| DNA-directed RNA polymerases I, II, and III subunit RPABC2 | RNA polymerases I, II, and III subunit ABC2; DNA-directed RNA polymerase II subunit F; DNA-directed RNA polymerases I, II, and III 14.4 kDa polypeptide; RPABC14.4; RPB14.4; RPB6 homolog; RPC15 | Homo sapiens (human) |
| DNA-directed RNA polymerase II subunit RPB7 | RNA polymerase II subunit B7; DNA-directed RNA polymerase II subunit G; RNA polymerase II 19 kDa subunit; RPB19 | Homo sapiens (human) |
| DNA-directed RNA polymerases I, II, and III subunit RPABC5 | RNA polymerases I, II, and III subunit ABC5; DNA-directed RNA polymerase III subunit L; RNA polymerase II 7.6 kDa subunit; RPB7.6; RPB10 homolog | Homo sapiens (human) |
| Transcription elongation factor SPT4 | hSPT4; DRB sensitivity-inducing factor 14 kDa subunit; DSIF p14; DRB sensitivity-inducing factor small subunit; DSIF small subunit | Homo sapiens (human) |
| Transcription initiation factor IIB | EC 2.3.1.48; General transcription factor TFIIB; S300-II | Homo sapiens (human) |
| FACT complex subunit SSRP1 | Chromatin-specific transcription elongation factor 80 kDa subunit; Facilitates chromatin transcription complex 80 kDa subunit; FACT 80 kDa subunit; FACTp80; Facilitates chromatin transcription complex subunit SSRP1; Recombination signal sequence recogniti | Homo sapiens (human) |
| Nuclear cap-binding protein subunit 1 | 80 kDa nuclear cap-binding protein; CBP80; NCBP 80 kDa subunit | Homo sapiens (human) |
| Nuclear pore complex protein Nup160 | 160 kDa nucleoporin; Nucleoporin Nup160 | Homo sapiens (human) |
| Transcription initiation factor TFIID subunit 10 | STAF28; Transcription initiation factor TFIID 30 kDa subunit; TAF(II)30; TAFII-30; TAFII30 | Homo sapiens (human) |
| General transcription factor IIH subunit 2 | Basic transcription factor 2 44 kDa subunit; BTF2 p44; General transcription factor IIH polypeptide 2; TFIIH basal transcription factor complex p44 subunit | Homo sapiens (human) |
| General transcription factor IIH subunit 3 | Basic transcription factor 2 34 kDa subunit; BTF2 p34; General transcription factor IIH polypeptide 3; TFIIH basal transcription factor complex p34 subunit | Homo sapiens (human) |
| Transcription initiation factor TFIID subunit 5 | Transcription initiation factor TFIID 100 kDa subunit; TAF(II)100; TAFII-100; TAFII100 | Homo sapiens (human) |
| Transcription initiation factor TFIID subunit 13 | Transcription initiation factor TFIID 18 kDa subunit; TAF(II)18; TAFII-18; TAFII18 | Homo sapiens (human) |
| Transcription initiation factor TFIID subunit 12 | Transcription initiation factor TFIID 20/15 kDa subunits; TAFII-20/TAFII-15; TAFII20/TAFII15 | Homo sapiens (human) |
| Transcription initiation factor TFIID subunit 9 | RNA polymerase II TBP-associated factor subunit G; STAF31/32; Transcription initiation factor TFIID 31 kDa subunit; TAFII-31; TAFII31; Transcription initiation factor TFIID 32 kDa subunit; TAFII-32; TAFII32 | Homo sapiens (human) |
| Nucleoporin NUP188 | hNup188 | Homo sapiens (human) |
| Transcription initiation factor TFIID subunit 2 | 150 kDa cofactor of initiator function; RNA polymerase II TBP-associated factor subunit B; TBP-associated factor 150 kDa; Transcription initiation factor TFIID 150 kDa subunit; TAF(II)150; TAFII-150; TAFII150 | Homo sapiens (human) |
| General transcription factor IIH subunit 5 | General transcription factor IIH polypeptide 5; TFB5 ortholog; TFIIH basal transcription factor complex TTD-A subunit | Homo sapiens (human) |
| Nucleoporin p54 | 54 kDa nucleoporin | Homo sapiens (human) |
| Negative elongation factor C/D | NELF-C/D; TH1-like protein | Homo sapiens (human) |
| Nuclear pore complex protein Nup93 | 93 kDa nucleoporin; Nucleoporin Nup93 | Homo sapiens (human) |
| Nucleoporin Nup43 | Nup107-160 subcomplex subunit Nup43; p42 | Homo sapiens (human) |
| Nucleoporin Nup37 | p37; Nup107-160 subcomplex subunit Nup37 | Homo sapiens (human) |
| Nucleoporin NUP35 | 35 kDa nucleoporin; Mitotic phosphoprotein 44; MP-44; Nuclear pore complex protein Nup53; Nucleoporin NUP53 | Homo sapiens (human) |
| Nuclear pore complex protein Nup133 | 133 kDa nucleoporin; Nucleoporin Nup133 | Homo sapiens (human) |
| Programmed cell death 6-interacting protein | PDCD6-interacting protein; ALG-2-interacting protein 1; ALG-2-interacting protein X; Hp95 | Homo sapiens (human) |
| Charged multivesicular body protein 7 | Chromatin-modifying protein 7 | Homo sapiens (human) |
| Negative elongation factor B | NELF-B; Cofactor of BRCA1 | Homo sapiens (human) |
| Nuclear pore complex protein Nup205 | 205 kDa nucleoporin; Nucleoporin Nup205 | Homo sapiens (human) |
| Transcription initiation factor TFIID subunit 4B | Transcription initiation factor TFIID 105 kDa subunit; TAF(II)105; TAFII-105; TAFII105 | Homo sapiens (human) |
| General transcription factor IIH subunit 4 | Basic transcription factor 2 52 kDa subunit; BTF2 p52; General transcription factor IIH polypeptide 4; TFIIH basal transcription factor complex p52 subunit | Homo sapiens (human) |
| TATA-binding protein-associated factor 2N | 68 kDa TATA-binding protein-associated factor; TAF(II)68; TAFII68; RNA-binding protein 56 | Homo sapiens (human) |
| E3 ubiquitin-protein ligase NEDD4-like | EC 2.3.2.26; HECT-type E3 ubiquitin transferase NED4L; NEDD4.2; Nedd4-2 | Homo sapiens (human) |
| Nucleoporin NDC1 | hNDC1; Transmembrane protein 48 | Homo sapiens (human) |
| Nuclear pore complex protein Nup85 | 85 kDa nucleoporin; FROUNT; Nucleoporin Nup75; Nucleoporin Nup85; Pericentrin-1 | Homo sapiens (human) |
| Negative elongation factor A | NELF-A; Wolf-Hirschhorn syndrome candidate 2 protein | Homo sapiens (human) |
| Transcription initiation factor TFIID subunit 9B | Neuronal cell death-related protein 7; DN-7; Transcription initiation factor TFIID subunit 9-like; Transcription-associated factor TAFII31L | Homo sapiens (human) |
| Aladin | Adracalin | Homo sapiens (human) |
| Vacuolar protein sorting-associated protein 28 homolog | H-Vps28; ESCRT-I complex subunit VPS28 | Homo sapiens (human) |
| Nuclear pore complex protein Nup50 | 50 kDa nucleoporin; Nuclear pore-associated protein 60 kDa-like; Nucleoporin Nup50 | Homo sapiens (human) |
| Charged multivesicular body protein 3 | Chromatin-modifying protein 3; Neuroendocrine differentiation factor; Vacuolar protein sorting-associated protein 24; hVps24 | Homo sapiens (human) |
| RNA polymerase II subunit A C-terminal domain phosphatase | EC 3.1.3.16; TFIIF-associating CTD phosphatase | Homo sapiens (human) |
| FACT complex subunit SPT16 | Chromatin-specific transcription elongation factor 140 kDa subunit; FACT 140 kDa subunit; FACTp140; Facilitates chromatin transcription complex subunit SPT16; hSPT16 | Homo sapiens (human) |
| Gag polyprotein | Pr55Gag | HIV-1 M:B_HXB2R |
| Protein Vpr | R ORF protein; Viral protein R | HIV-1 M:B_HXB2R |
| Protein Nef | 3'ORF; Negative factor; F-protein | HIV-1 M:B_HXB2R |
| Protein Vpu | U ORF protein; Viral protein U | HIV-1 M:B_HXB2R |