Target type: biologicalprocess
The chemical reactions and pathways by which one-carbon (C1) units are transferred between tetrahydrofolate molecules, to synthesise other tetrahydrofolate molecules. [GOC:yaf, PMID:1825999]
Tetrahydrofolate (THF) interconversion is a crucial biological process involving the conversion of folate, a vitamin B9, into its active coenzyme form, THF. This process occurs in multiple steps and plays a vital role in various metabolic pathways, including DNA synthesis, amino acid metabolism, and the synthesis of neurotransmitters.
**1. Reduction of Dihydrofolate to Tetrahydrofolate:**
The first step involves the reduction of dihydrofolate (DHF) to THF by the enzyme dihydrofolate reductase (DHFR). This step requires the reducing agent NADPH, which donates electrons to DHF.
**2. Interconversion of Tetrahydrofolate Derivatives:**
THF can exist in various forms, each carrying a specific one-carbon unit (C1). These C1 units are crucial for various metabolic reactions. The interconversion between different THF derivatives involves enzymatic reactions that transfer C1 units from one form to another. Key enzymes involved in this process include:
- **Serine hydroxymethyltransferase:** Converts serine to glycine, transferring a C1 unit from serine to THF, forming 5,10-methylene THF.
- **Thymidylate synthase:** Uses 5,10-methylene THF to convert deoxyuridylate (dUMP) to deoxythymidylate (dTMP), a crucial step in DNA synthesis.
- **Glycine cleavage enzyme:** Catalyzes the cleavage of glycine, generating a C1 unit that is transferred to THF, forming 5,10-methylene THF.
**3. Regeneration of Tetrahydrofolate:**
The various THF derivatives involved in metabolic reactions are eventually converted back to THF, ensuring continuous supply of the active coenzyme. This regeneration involves multiple enzymatic steps, including the reduction of dihydrofolate by DHFR.
**4. Importance of Tetrahydrofolate Interconversion:**
The interconversion of THF is essential for various biological processes, including:
- **DNA synthesis:** THF derivatives are required for the synthesis of thymine, a crucial component of DNA.
- **Amino acid metabolism:** THF plays a role in the synthesis and breakdown of amino acids, particularly glycine and serine.
- **Neurotransmitter synthesis:** THF is required for the synthesis of neurotransmitters like serotonin and dopamine.
Deficiencies in folate or disruptions in THF interconversion can lead to various health problems, including anemia, neural tube defects, and cardiovascular diseases.'
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Protein | Definition | Taxonomy |
---|---|---|
Serine hydroxymethyltransferase, mitochondrial | A serine hydroxymethyltransferase, mitochondrial that is encoded in the genome of human. [PRO:DNx, UniProtKB:P34897] | Homo sapiens (human) |
Serine hydroxymethyltransferase, cytosolic | A serine hydroxymethyltransferase, cytosolic that is encoded in the genome of human. [PRO:DNx, UniProtKB:P34896] | Homo sapiens (human) |
C-1-tetrahydrofolate synthase, cytoplasmic | A C-1-tetrahydrofolate synthase, cytoplasmic that is encoded in the genome of human. [PRO:DNx, UniProtKB:P11586] | Homo sapiens (human) |
Thymidylate synthase | A thymidylate synthase that is encoded in the genome of human. [PRO:DNx, UniProtKB:P04818] | Homo sapiens (human) |
Compound | Definition | Classes | Roles |
---|---|---|---|
oxaprozin | oxaprozin : A monocarboxylic acid that is a propionic acid derivative having a 4,5-diphenyl-1,3-oxazol-2-yl substituent at position 3. It is non-steroidal anti-inflammatory drug commonly used to relieve the pain and inflammatory responses associated with osteoarthritis and rheumatoid arthritis. Oxaprozin: An oxazole-propionic acid derivative, cyclooxygenase inhibitor, and non-steroidal anti-inflammatory drug that is used in the treatment of pain and inflammation associated with of OSTEOARTHRITIS; RHEUMATOID ARTHRITIS; and ARTHRITIS, JUVENILE. | 1,3-oxazoles; monocarboxylic acid | analgesic; non-steroidal anti-inflammatory drug |
papaverine | papaverine : A benzylisoquinoline alkaloid that is isoquinoline substituted by methoxy groups at positions 6 and 7 and a 3,4-dimethoxybenzyl group at position 1. It has been isolated from Papaver somniferum. Papaverine: An alkaloid found in opium but not closely related to the other opium alkaloids in its structure or pharmacological actions. It is a direct-acting smooth muscle relaxant used in the treatment of impotence and as a vasodilator, especially for cerebral vasodilation. The mechanism of its pharmacological actions is not clear, but it apparently can inhibit phosphodiesterases and it may have direct actions on calcium channels. | benzylisoquinoline alkaloid; dimethoxybenzene; isoquinolines | antispasmodic drug; vasodilator agent |
phenolphthalein | Phenolphthalein: An acid-base indicator which is colorless in acid solution, but turns pink to red as the solution becomes alkaline. It is used medicinally as a cathartic. | phenols | |
primaquine | primaquine : An N-substituted diamine that is pentane-1,4-diamine substituted by a 6-methoxyquinolin-8-yl group at the N(4) position. It is a drug used in the treatment of malaria and Pneumocystis pneumonia. Primaquine: An aminoquinoline that is given by mouth to produce a radical cure and prevent relapse of vivax and ovale malarias following treatment with a blood schizontocide. It has also been used to prevent transmission of falciparum malaria by those returning to areas where there is a potential for re-introduction of malaria. Adverse effects include anemias and GI disturbances. (From Martindale, The Extra Pharmacopeia, 30th ed, p404) | aminoquinoline; aromatic ether; N-substituted diamine | antimalarial |
trimethoprim | trimethoprim : An aminopyrimidine antibiotic whose structure consists of pyrimidine 2,4-diamine and 1,2,3-trimethoxybenzene moieties linked by a methylene bridge. Trimethoprim: A pyrimidine inhibitor of dihydrofolate reductase, it is an antibacterial related to PYRIMETHAMINE. It is potentiated by SULFONAMIDES and the TRIMETHOPRIM, SULFAMETHOXAZOLE DRUG COMBINATION is the form most often used. It is sometimes used alone as an antimalarial. TRIMETHOPRIM RESISTANCE has been reported. | aminopyrimidine; methoxybenzenes | antibacterial drug; diuretic; drug allergen; EC 1.5.1.3 (dihydrofolate reductase) inhibitor; environmental contaminant; xenobiotic |
1,8-naphthalenedicarboxylic acid anhydride | 1,8-naphthalenedicarboxylic acid anhydride: used as seed protector from herbicides | cyclic dicarboxylic anhydride | |
fluorodeoxyuridylate | Fluorodeoxyuridylate: 5-Fluoro-2'-deoxyuridylate. An inhibitor of thymidylate synthetase. Formed from 5-fluorouracil or 5-fluorodeoxyuridine. | pyrimidine 2'-deoxyribonucleoside 5'-monophosphate | |
flupirtine | flupirtine: RN given refers to parent cpd without isomeric designation | aminopyridine | |
duloxetine | duloxetine | ||
2'-deoxyuridylic acid | 2'-deoxyuridylic acid: RN given refers to parent cpd | deoxyuridine phosphate; pyrimidine 2'-deoxyribonucleoside 5'-monophosphate | Escherichia coli metabolite; metabolite; mouse metabolite |
dansyl hydrazine | |||
methotrexate | dicarboxylic acid; monocarboxylic acid amide; pteridines | abortifacient; antimetabolite; antineoplastic agent; antirheumatic drug; dermatologic drug; DNA synthesis inhibitor; EC 1.5.1.3 (dihydrofolate reductase) inhibitor; immunosuppressive agent | |
n-(4-(n-((2,4-diaminofuro(2,3-d)pyrimidin-5-yl)methyl)amino)benzoyl)glutamic acid | N-(4-(N-((2,4-diaminofuro(2,3-d)pyrimidin-5-yl)methyl)amino)benzoyl)glutamic acid: structure given in first source | ||
n-4-hydroxy-2'-deoxycytidylic acid | N-4-hydroxy-2'-deoxycytidylic acid: reversibly binds to thymidylate synthetase | ||
flavin mononucleotide | flavin mononucleotide; vitamin B2 | bacterial metabolite; coenzyme; cofactor; human metabolite; mouse metabolite | |
N-[7-(2-furanyl)-5-oxo-7,8-dihydro-6H-quinazolin-2-yl]acetamide | quinazolines | ||
pyrvinium | pyrvinium : A quinolinium ion that is 1-methylquinolinium substituted by dimethylamino group at position 6 and a (E)-2-(2,5-dimethyl-1-phenyl-1H-pyrrol-3-yl)ethenyl at position 2. It is a anthelminthic drug active against pinworms. The salts of pyrvinium can also be used as anticancer agents. pyrvinium: RN given refers to parent cpd; synonyms vanquin & vankin refer to pamoate[2:1]; structure in Merck Index, 9th ed, #7810 | quinolinium ion | anthelminthic drug; antineoplastic agent |
2-(2-furanylmethyl)-3-[[2-(3-pyridinyl)-3H-benzimidazol-5-yl]amino]-3H-isoindol-1-one | isoindoles | ||
gw2974 | GW2974: quinazoline derivative, which is able to block the activation of both the EGFR and erbB2 | pyridopyrimidine | |
folic acid | folcysteine: used to promote fertility in chickens vitamin B9 : Any B-vitamin that exhibits biological activity against vitamin B9 deficiency. Vitamin B9 refers to the many forms of folic acid and its derivatives, including tetrahydrofolic acid (the active form), methyltetrahydrofolate (the primary form found in blood), methenyltetrahydrofolate, folinic acid amongst others. They are present in abundance in green leafy vegetables, citrus fruits, and animal products. Lack of vitamin B9 leads to anemia, a condition in which the body cannot produce sufficient number of red blood cells. Symptoms of vitamin B9 deficiency include fatigue, muscle weakness, and pale skin. | folic acids; N-acyl-amino acid | human metabolite; mouse metabolite; nutrient |
raltitrexed | N-acyl-amino acid | ||
nolatrexed | nolatrexed: structure given in first source; RN given refers to dihydrochloride | ||
ici 198583 | ICI 198583: RN & structure given in first source | ||
n-(4(n-((2-amino-4-hydroxy-6-quinazolinyl)methyl)prop-2-ynylamino)benzoyl)-l-glutamic acid | |||
1843u89 | 1843U89: structure given in first source; a folate analog | ||
5,11-methenyltetrahydrohomofolate | |||
pemetrexed | pemetrexed disodium : An organic sodium salt that is the disodium salt of N-{4-[2-(2-amino-4-oxo-4,7-dihydro-1H-pyrrolo[2,3-d]pyrimidin-5-yl)ethyl]benzoyl}-L-glutamic acid. Inhibits thymidylate synthase (TS), 421 dihydrofolate reductase (DHFR), and glycinamide ribonucleotide formyltransferase (GARFT). | N-acyl-L-glutamic acid; pyrrolopyrimidine | antimetabolite; antineoplastic agent; EC 1.5.1.3 (dihydrofolate reductase) inhibitor; EC 2.1.1.45 (thymidylate synthase) inhibitor; EC 2.1.2.2 (phosphoribosylglycinamide formyltransferase) inhibitor |
n(10)-methylfolate | folic acids | ||
5-methyltetrahydrohomofolic acid | 5-methyltetrahydrohomofolic acid: RN given refers to parent cpd | ||
cb 3717 | N-acyl-L-glutamic acid | ||
cb 30865 | |||
ag 85 | AG 85: structure given in first source | ||
cb 3705 | CB 3705: inhibitor of dihydrofolate reductase & thymidylate synthetase | ||
2-desamino-2-methyl-5,8-dideazaisofolic acid | 2-desamino-2-methyl-5,8-dideazaisofolic acid: structure given in first source | ||
(5)n,(8)n-deaza-(10)-n-methylfolate | (5)N,(8)N-deaza-(10)-N-methylfolate: structure |