Page last updated: 2024-10-24

negative regulation of ossification

Definition

Target type: biologicalprocess

Any process that stops, prevents, or reduces the frequency, rate or extent of ossification, the formation of bone or of a bony substance or the conversion of fibrous tissue or of cartilage into bone or a bony substance. [GOC:go_curators]

Negative regulation of ossification is a complex biological process that involves a fine-tuned balance of various cellular and molecular mechanisms to control the formation and maturation of bone tissue. This process is essential for maintaining skeletal integrity, ensuring proper bone growth and development, and preventing excessive bone formation that could lead to pathological conditions. Here is a detailed explanation of the process:

1. **Osteoblast Inhibition:** Osteoblasts are cells responsible for bone formation. Negative regulation of ossification primarily involves inhibiting the activity and differentiation of osteoblasts. This can be achieved through various mechanisms:
* **Signaling Pathways:** Several signaling pathways play a crucial role in regulating osteoblast activity, including the Wnt, BMP, and TGF-beta pathways. Negative regulation of these pathways can suppress osteoblast differentiation and bone formation. For instance, Sclerostin, a protein produced by osteocytes, acts as an antagonist of the Wnt signaling pathway, inhibiting osteoblast activity.
* **Transcriptional Regulation:** Transcription factors such as Runx2 and Osterix are essential for osteoblast differentiation and bone formation. Negative regulation of ossification can occur by inhibiting the expression of these transcription factors or by activating other transcription factors that suppress osteoblast activity.
* **MicroRNAs:** MicroRNAs (miRNAs) are small non-coding RNA molecules that can regulate gene expression. Certain miRNAs have been shown to target and inhibit the expression of key genes involved in osteoblast differentiation and bone formation, contributing to negative regulation of ossification.

2. **Osteoclast Activation:** Osteoclasts are cells responsible for bone resorption, the breakdown of bone tissue. Negative regulation of ossification can also involve promoting osteoclast activity, which leads to increased bone resorption and a reduction in bone mass.
* **RANKL and OPG:** The receptor activator of nuclear factor kappa-B ligand (RANKL) is a key signaling molecule that promotes osteoclast differentiation and activation. Osteoprotegerin (OPG) is a decoy receptor that binds to RANKL, preventing it from activating osteoclasts. Negative regulation of ossification can involve increased expression of RANKL or decreased expression of OPG, leading to enhanced osteoclast activity and bone resorption.

3. **Matrix Degradation:** The extracellular matrix of bone is composed of collagen and other proteins. Negative regulation of ossification can involve the degradation of this matrix, which weakens bone tissue and can lead to bone loss.
* **Matrix Metalloproteinases (MMPs):** MMPs are a family of enzymes that can degrade various components of the extracellular matrix, including collagen. Increased activity of MMPs can contribute to negative regulation of ossification by breaking down the bone matrix.

4. **Other Factors:** Other factors can also contribute to negative regulation of ossification, including:
* **Hormones:** Hormones such as parathyroid hormone (PTH), calcitonin, and thyroid hormones can influence bone metabolism and contribute to negative regulation of ossification.
* **Inflammation:** Chronic inflammation can lead to increased bone resorption and decreased bone formation, contributing to negative regulation of ossification.
* **Mechanical Loading:** Lack of mechanical stress on bones can lead to decreased bone formation and increased bone resorption, contributing to negative regulation of ossification.

Negative regulation of ossification is a vital process for maintaining bone homeostasis and preventing excessive bone formation. However, dysregulation of this process can lead to various bone diseases, such as osteoporosis and osteopenia. Understanding the intricate mechanisms involved in this process is crucial for developing effective therapeutic strategies for these conditions.'
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Proteins (7)

ProteinDefinitionTaxonomy
SclerostinA sclerostin that is encoded in the genome of human. [PRO:DNx, UniProtKB:Q9BQB4]Homo sapiens (human)
Secreted frizzled-related protein 1A secreted frizzled-related protein 1 that is encoded in the genome of human. [PRO:DNx, UniProtKB:Q8N474]Homo sapiens (human)
Neurogenic locus notch homolog protein 1A neurogenic locus notch homolog protein 1 that is encoded in the genome of human. [PRO:DNx, UniProtKB:P46531]Homo sapiens (human)
Calcitonin receptorA calcitonin receptor that is encoded in the genome of human. [PRO:DNx, UniProtKB:P30988]Homo sapiens (human)
Tryptophan 5-hydroxylase 1A tryptophan 5-hydroxylase 1 that is encoded in the genome of human. [PRO:DNx, UniProtKB:P17752]Homo sapiens (human)
Apoptosis regulator Bcl-2An apoptosis regulator Bcl-2 that is encoded in the genome of human. [PRO:WCB, UniProtKB:P10415]Homo sapiens (human)
Dickkopf-related protein 1A dickkopf-related protein 1 that is encoded in the genome of human. [PRO:DNx, UniProtKB:O94907]Homo sapiens (human)

Compounds (38)

CompoundDefinitionClassesRoles
catechinhydroxyflavan
chlorcyclizinechlorcyclizine: was heading 1964-94 (Prov 1964-73); CHLOROCYCLIZINE & HISTACHLORAZINE were see CHLORCYCLIZINE 1977-94; use PIPERAZINES to search CHLORCYCLIZINE 1966-94; histamine H1-blocker used both orally and topically in allergies and also for the prevention of motion sicknessdiarylmethane
gossypolGossypol: A dimeric sesquiterpene found in cottonseed (GOSSYPIUM). The (-) isomer is active as a male contraceptive (CONTRACEPTIVE AGENTS, MALE) whereas toxic symptoms are associated with the (+) isomer.
alizarindihydroxyanthraquinonechromophore;
dye;
plant metabolite
boldineaporphine alkaloid
calotropincalotropin: structure in first sourcecardenolide glycoside
paclitaxelTaxus: Genus of coniferous yew trees or shrubs, several species of which have medicinal uses. Notable is the Pacific yew, Taxus brevifolia, which is used to make the anti-neoplastic drug taxol (PACLITAXEL).taxane diterpenoid;
tetracyclic diterpenoid
antineoplastic agent;
human metabolite;
metabolite;
microtubule-stabilising agent
epigallocatechin gallate(-)-epigallocatechin 3-gallate : A gallate ester obtained by the formal condensation of gallic acid with the (3R)-hydroxy group of (-)-epigallocatechin.

epigallocatechin gallate: a steroid 5alpha-reductase inhibitor and antimutagen in green tea (Camellia sinensis)
flavans;
gallate ester;
polyphenol
antineoplastic agent;
antioxidant;
apoptosis inducer;
geroprotector;
Hsp90 inhibitor;
neuroprotective agent;
plant metabolite
5,6,7,8-tetrahydro-1-naphthol5,6,7,8-tetrahydro-1-naphthol : 1-naphthol hydrogenated at C-5, -6, -7 and -8.tetralins
epicatechin(-)-epicatechin : A catechin with (2R,3R)-configuration.catechin;
polyphenol
antioxidant
gallocatechol(-)-epigallocatechin : A flavan-3,3',4',5,5',7-hexol having (2R,3R)-configuration.catechin;
flavan-3,3',4',5,5',7-hexol
antioxidant;
food component;
plant metabolite
chelerythrine chloride
epicatechin gallate(-)-epicatechin-3-O-gallate : A gallate ester obtained by formal condensation of the carboxy group of gallic acid with the (3R)-hydroxy group of epicatechin. A natural product found in Parapiptadenia rigida.

epicatechin gallate: a steroid 5alpha-reductase inhibitor; RN given refers to the (cis)-isomer; structure given in first source; isolated from green tea
catechin;
gallate ester;
polyphenol
EC 3.2.1.1 (alpha-amylase) inhibitor;
EC 3.2.1.20 (alpha-glucosidase) inhibitor;
metabolite
blastmycinblastmycin: structureamidobenzoic acid
apogossypolapogossypol: structure in first source
umi-77UMI-77: an Mcl-1 inhibitor; structure in first source
4-(4-ethoxycarbonylanilino)-2-quinazolinecarboxylic acid ethyl esterquinazolines
thioguanine anhydrousThioguanine: An antineoplastic compound which also has antimetabolite action. The drug is used in the therapy of acute leukemia.

tioguanine : A 2-aminopurine that is the 6-thiono derivative of 2-amino-1,9-dihydro-6H-purine. Incorporates into DNA and inhibits synthesis. Used in the treatment of leukaemia.
2-aminopurinesanticoronaviral agent;
antimetabolite;
antineoplastic agent
ixabepilone1,3-thiazoles;
beta-hydroxy ketone;
epoxide;
lactam;
macrocycle
antineoplastic agent;
microtubule-destabilising agent
abt-737aromatic amine;
aryl sulfide;
biphenyls;
C-nitro compound;
monochlorobenzenes;
N-arylpiperazine;
N-sulfonylcarboxamide;
secondary amino compound;
tertiary amino compound
anti-allergic agent;
anti-inflammatory agent;
antineoplastic agent;
apoptosis inducer;
B-cell lymphoma 2 inhibitor
nutlin-3anutlin 3: an MDM2 antagonist; structure in first sourcestilbenoid
N-[4-(2-tert-butylphenyl)sulfonylphenyl]-2,3,4-trihydroxy-5-[(2-propan-2-ylphenyl)methyl]benzamidebenzamides
MI-63MI-63 : An azaspiro compound resulting from the formal fusion of position 3 of 6-chloro-oxindole with position 3 of (2R,3SS5S)-3-(3-chloro-2-fluorophenyl)-5-(2,2-dimethylpropyl)-N-[2-(morpholin-4-yl)ethyl]pyrrolidine-2-carboxamide. It is a potent inhibitor of the MDM2-p53 interaction.azaspiro compound;
monochlorobenzenes;
monofluorobenzenes;
morpholines;
oxindoles;
pyrrolidines;
secondary carboxamide
apoptosis inducer
WAY-316606WAY-316606 : A sulfonamide resulting from the formal condensation of the sulfonic acid group of 5-(phenylsulfonyl)-2-(trifluoromethyl)benzenesulfonic acid with the primary amino group of piperidin-4-amine. An inhibitor of secreted Frizzled-Related Protein-1 (sFRP-1).(trifluoromethyl)benzenes;
piperidines;
secondary amino compound;
sulfonamide;
sulfone
secreted frizzled-related protein 1 inhibitor
navitoclaxaryl sulfide;
monochlorobenzenes;
morpholines;
N-sulfonylcarboxamide;
organofluorine compound;
piperazines;
secondary amino compound;
sulfone;
tertiary amino compound
antineoplastic agent;
apoptosis inducer;
B-cell lymphoma 2 inhibitor
telotristattelotristat: a tryptophan hydroxylase inhibitorphenylalanine derivative
(1-(4-(naphthalen-2-yl)pyrimidin-2-yl)piperidin-4-yl)methanamineWAY-262611: a wingless beta-catenin agonist; structure in first sourcenaphthalenes
lp533401LP533401: Serotonin Agents; Tryptophan Hydroxylase inhibitor; structure in first source
bms 694153
abt-199venetoclax : A member of the class of pyrrolopyridines that is a potent inhibitor of the antiapoptotic protein B-cell lymphoma 2. It is used for treamtment of chronic lymphocytic leukemia with 17p deletion.

venetoclax: A BCL-2 inhibitor with antineoplastic activity that is used in the treatment of CHRONIC LYMPHOCYTIC LEUKEMIA associated with chromosome 17p deletion; structure in first source.
aromatic ether;
C-nitro compound;
monochlorobenzenes;
N-alkylpiperazine;
N-arylpiperazine;
N-sulfonylcarboxamide;
oxanes;
pyrrolopyridine
antineoplastic agent;
apoptosis inducer;
B-cell lymphoma 2 inhibitor
nvp-cgm097NVP-CGM097: an MDM2 and HDM2 inhibitor; structure in first source
mk-8825
jy-1-106JY-1-106: a BH3 alpha-helix mimetic that functions as a pan-Bcl-2 inhibitor; structure in first source
a-1155463A-1155463: a Bcl-X(L) inhibitor; structure in first source
bm-1197BM-1197: inhibits both Bcl-xL and Bcl-2; has antineoplastic activity
a-1331852A-1331852: a Bcl-X(L) inhibitor; structure in first source
BDA-366BDA-366 : A member of the class of anthraquinone that is 1,4-diamino-9,10-anthraquinone in which the two amino groups are carrying 3-(diethylamino)-2-hydroxypropyl and (oxiran-2-yl)methyl substituents. It exhibits anti-cancer properties.

BDA-366: has antineoplastic activity; binds Bcl-2 protein; structure in first source
anthraquinone;
epoxide;
secondary alcohol;
secondary amino compound;
tertiary amino compound
antineoplastic agent;
apoptosis inducer
apogossypoloneapogossypolone: has antineoplastic activity; structure in first source