Page last updated: 2024-10-24

phagolysosome

Definition

Target type: cellularcomponent

A membrane-bounded intracellular vesicle formed by maturation of an early phagosome following the ingestion of particulate material by phagocytosis; during maturation, phagosomes acquire markers of late endosomes and lysosomes. [GOC:mah, PMID:12388753, PMID:14733906]

The phagolysosome is a cellular compartment formed when a phagosome, a vesicle containing engulfed material such as bacteria or cellular debris, fuses with a lysosome, an organelle containing hydrolytic enzymes. This fusion creates a unique environment characterized by a complex interplay of membranes and enzymatic activities.

The phagolysosome membrane is composed of a mosaic of lipids and proteins derived from both the phagosome and lysosome. The phagosome membrane contributes proteins involved in engulfment and cargo transport, while the lysosome membrane brings in hydrolytic enzymes and proton pumps. These pumps acidify the phagolysosome lumen, creating a harsh environment conducive to the breakdown of the engulfed material.

The phagolysosome lumen contains a diverse array of hydrolytic enzymes, including proteases, nucleases, lipases, and glycosidases. These enzymes are responsible for the degradation of proteins, nucleic acids, lipids, and carbohydrates, respectively. Additionally, the phagolysosome may contain antimicrobial peptides and reactive oxygen species, further contributing to the breakdown and elimination of pathogens.

The phagolysosome also interacts with other cellular components, such as the endoplasmic reticulum and the Golgi apparatus. This interaction allows for the trafficking of necessary enzymes and components, as well as the regulation of phagolysosome formation and function.

In summary, the phagolysosome is a dynamic and complex cellular compartment with a specialized membrane and lumen. It plays a crucial role in the degradation of engulfed materials, including pathogens, and contributes to the cellular defense system.'
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Proteins (4)

ProteinDefinitionTaxonomy
Neutrophil cytosol factor 1A neutrophil cytosol factor 1 that is encoded in the genome of human. [PRO:DNx, UniProtKB:P14598]Homo sapiens (human)
Disintegrin and metalloproteinase domain-containing protein 8A disintegrin and metalloproteinase domain-containing protein 8 that is encoded in the genome of human. [PRO:WCB, UniProtKB:P78325]Homo sapiens (human)
Phospholipase A2 group VA phospholipase A2 group V that is encoded in the genome of human. [PRO:DNx, UniProtKB:P39877]Homo sapiens (human)
Neutrophil cytosol factor 1A neutrophil cytosol factor 1 that is encoded in the genome of human. [PRO:DNx, UniProtKB:P14598]Homo sapiens (human)

Compounds (23)

CompoundDefinitionClassesRoles
1-(1-naphthyl)piperazine1-(1-naphthyl)piperazine: serotonin agonist; structure given in first sourceN-arylpiperazine
ebselenebselen : A benzoselenazole that is 1,2-benzoselenazol-3-one carrying an additional phenyl substituent at position 2. Acts as a mimic of glutathione peroxidase.benzoselenazoleanti-inflammatory drug;
antibacterial agent;
anticoronaviral agent;
antifungal agent;
antineoplastic agent;
antioxidant;
apoptosis inducer;
EC 1.13.11.33 (arachidonate 15-lipoxygenase) inhibitor;
EC 1.13.11.34 (arachidonate 5-lipoxygenase) inhibitor;
EC 1.3.1.8 [acyl-CoA dehydrogenase (NADP(+))] inhibitor;
EC 1.8.1.12 (trypanothione-disulfide reductase) inhibitor;
EC 2.5.1.7 (UDP-N-acetylglucosamine 1-carboxyvinyltransferase) inhibitor;
EC 2.7.10.1 (receptor protein-tyrosine kinase) inhibitor;
EC 3.1.3.25 (inositol-phosphate phosphatase) inhibitor;
EC 3.4.22.69 (SARS coronavirus main proteinase) inhibitor;
EC 3.5.4.1 (cytosine deaminase) inhibitor;
EC 5.1.3.2 (UDP-glucose 4-epimerase) inhibitor;
enzyme mimic;
ferroptosis inhibitor;
genotoxin;
hepatoprotective agent;
neuroprotective agent;
radical scavenger
quipazineQuipazine: A pharmacologic congener of serotonin that contracts smooth muscle and has actions similar to those of tricyclic antidepressants. It has been proposed as an oxytocic.piperazines;
pyridines
carbostyrilquinolin-2(1H)-one : A quinolone that is 1,2-dihydroquinoline substituted by an oxo group at position 2.

Quinolones: A group of derivatives of naphthyridine carboxylic acid, quinoline carboxylic acid, or NALIDIXIC ACID.
monohydroxyquinoline;
quinolone
bacterial xenobiotic metabolite
quinolineazaarene;
mancude organic heterobicyclic parent;
ortho-fused heteroarene;
quinolines
2-naphthylamine2-naphthylamine : A naphthylamine carrying the amino group at position 2.

2-Naphthylamine: A naphthalene derivative with carcinogenic action.
naphthylaminecarcinogenic agent
2-methylquinoline2-methylquinoline: RN given refers to parent cpd

methylquinoline : Any member of the class of quinolines carrying at least one methyl substituent.

quinaldine : A quinoline compound in which the quinoline skeleton is substituted at C-2 with a methyl group.
quinolines
2-aminopyrimidineaminopyrimidine : A member of the class of pyrimidines that is pyrimidine substituted by at least one amino group and its derivatives.

pyrimidin-2-amine : An aminopyrimidine carrying an amino group at position 2.
aminopyrimidine
2-aminobenzothiazolebenzothiazoles
alpha-aminopyridinealpha-aminopyridine: RN given refers to parent cpd; structure in Merck Index, 9th ed, #485

aminopyridine : Compounds containing a pyridine skeleton substituted by one or more amine groups.
8-aminoquinoline
6-aminoquinoline
1,2-Dihydroquinolin-2-imineaminoquinoline
5-aminoquinoline
4-aminoquinoline
1-(4-pyridyl)piperazine1-(4-pyridyl)piperazine: structure in first source
1-aminoisoquinoline
4-amino-2-methylquinoline4-amino-2-methylquinoline: used to induce miniature endplate potentials
3-octylthio-1,1,1-trifluoro-2-propanone3-octylthio-1,1,1-trifluoro-2-propanone: a pesticide synergist; inhibits juvenile hormone esterase
varespladibaromatic ether;
benzenes;
dicarboxylic acid monoamide;
indoles;
monocarboxylic acid;
primary carboxamide
anti-inflammatory drug;
antidote;
EC 3.1.1.4 (phospholipase A2) inhibitor
ym 26734YM 26734: inhibits group II phospholipase A2; structure given in first source
indoxamindoxam: structure in first source
incb3619INCB3619: ADAM inhibitor; structure in first source