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pyrophosphatase activity

Definition

Target type: molecularfunction

Catalysis of the hydrolysis of a pyrophosphate bond (diphosphate bond) between two phosphate groups. [GOC:curators, https://en.wikipedia.org/wiki/Pyrophosphatase]

Pyrophosphatase activity refers to the enzymatic hydrolysis of pyrophosphate (PPi) into two inorganic phosphate (Pi) molecules. This reaction is crucial for various cellular processes, including:

* **Nucleotide metabolism:** Pyrophosphatase activity is essential for the synthesis of nucleotides, the building blocks of DNA and RNA. Many biosynthetic pathways, such as those involving DNA polymerase and RNA polymerase, utilize pyrophosphatase activity to drive the reaction forward and ensure the proper formation of nucleic acids.

* **Energy metabolism:** PPi hydrolysis releases energy, which can be used to fuel other cellular reactions. This is particularly relevant in the context of glycolysis, where pyrophosphatase activity is involved in the conversion of glucose-6-phosphate to fructose-6-phosphate.

* **Signal transduction:** Pyrophosphatases can participate in signaling pathways by modulating the levels of PPi, which can act as a second messenger molecule. For example, the hydrolysis of PPi by specific pyrophosphatases can regulate the activity of protein kinases and other signaling proteins.

* **Regulation of enzyme activity:** Pyrophosphatase activity can regulate the activity of other enzymes by controlling the concentration of PPi, which can act as a competitive inhibitor or activator of certain enzymes.

* **Metal ion homeostasis:** Some pyrophosphatases are involved in the transport and regulation of metal ions, such as magnesium and calcium. These pyrophosphatases can hydrolyze PPi bound to metal ions, influencing their cellular distribution and availability.

The specific molecular mechanisms by which pyrophosphatases carry out their catalytic function vary depending on the enzyme type. However, the general principle involves the formation of a transition state complex between the enzyme, PPi, and water molecules, leading to the cleavage of the pyrophosphate bond and the release of two Pi molecules. This process often requires the presence of metal ions, such as magnesium, which act as cofactors for the catalytic reaction.'
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Proteins (4)

ProteinDefinitionTaxonomy
Undecaprenyl-diphosphataseAn undecaprenyl-diphosphatase that is encoded in the genome of Escherichia coli K-12. [PRO:DNx, UniProtKB:P60932]Escherichia coli K-12
Alkaline phosphatase, tissue-nonspecific isozyme An alkaline phosphatase, tissue-nonspecific isozyme that is encoded in the genome of cow. [OMA:P09487, PRO:DNx]Bos taurus (cattle)
Phosphoethanolamine/phosphocholine phosphataseA phosphoethanolamine/phosphocholine phosphatase that is encoded in the genome of human. [PRO:DNx, UniProtKB:Q8TCT1]Homo sapiens (human)
Alkaline phosphatase, tissue-nonspecific isozymeAn alkaline phosphatase, tissue-nonspecific isozyme that is encoded in the genome of human. [PRO:DNx, UniProtKB:P05186]Homo sapiens (human)

Compounds (22)

CompoundDefinitionClassesRoles
theophyllinedimethylxanthineadenosine receptor antagonist;
anti-asthmatic drug;
anti-inflammatory agent;
bronchodilator agent;
drug metabolite;
EC 3.1.4.* (phosphoric diester hydrolase) inhibitor;
fungal metabolite;
human blood serum metabolite;
immunomodulator;
muscle relaxant;
vasodilator agent
adenosine monophosphateAdenosine Monophosphate: Adenine nucleotide containing one phosphate group esterified to the sugar moiety in the 2'-, 3'-, or 5'-position.adenosine 5'-phosphate;
purine ribonucleoside 5'-monophosphate
adenosine A1 receptor agonist;
cofactor;
EC 3.1.3.1 (alkaline phosphatase) inhibitor;
EC 3.1.3.11 (fructose-bisphosphatase) inhibitor;
fundamental metabolite;
micronutrient;
nutraceutical
leucineleucine : A branched-chain amino acid that consists of glycine in which one of the hydrogens attached to the alpha-carbon is substituted by an isobutyl group.

Leucine: An essential branched-chain amino acid important for hemoglobin formation.
amino acid zwitterion;
L-alpha-amino acid;
leucine;
proteinogenic amino acid;
pyruvate family amino acid
algal metabolite;
Escherichia coli metabolite;
human metabolite;
mouse metabolite;
plant metabolite;
Saccharomyces cerevisiae metabolite
phenylalanineL-phenylalanine : The L-enantiomer of phenylalanine.

phenylalanine : An aromatic amino acid that is alanine in which one of the methyl hydrogens is substituted by a phenyl group.

Phenylalanine: An essential aromatic amino acid that is a precursor of MELANIN; DOPAMINE; noradrenalin (NOREPINEPHRINE), and THYROXINE.
amino acid zwitterion;
erythrose 4-phosphate/phosphoenolpyruvate family amino acid;
L-alpha-amino acid;
phenylalanine;
proteinogenic amino acid
algal metabolite;
EC 3.1.3.1 (alkaline phosphatase) inhibitor;
Escherichia coli metabolite;
human xenobiotic metabolite;
micronutrient;
mouse metabolite;
nutraceutical;
plant metabolite;
Saccharomyces cerevisiae metabolite
tryptophantryptophan : An alpha-amino acid that is alanine bearing an indol-3-yl substituent at position 3.

Tryptophan: An essential amino acid that is necessary for normal growth in infants and for NITROGEN balance in adults. It is a precursor of INDOLE ALKALOIDS in plants. It is a precursor of SEROTONIN (hence its use as an antidepressant and sleep aid). It can be a precursor to NIACIN, albeit inefficiently, in mammals.
erythrose 4-phosphate/phosphoenolpyruvate family amino acid;
L-alpha-amino acid;
L-alpha-amino acid zwitterion;
proteinogenic amino acid;
tryptophan;
tryptophan zwitterion
antidepressant;
Escherichia coli metabolite;
human metabolite;
micronutrient;
mouse metabolite;
nutraceutical;
plant metabolite;
Saccharomyces cerevisiae metabolite
homoarginineL-homoarginine : An L-lysine derivative that is the L-enantiomer of homoarginine.homoarginine;
L-lysine derivative;
non-proteinogenic L-alpha-amino acid
biomarker;
EC 3.1.3.1 (alkaline phosphatase) inhibitor;
human metabolite;
rat metabolite;
xenobiotic metabolite
levamisolelevamisole : A 6-phenyl-2,3,5,6-tetrahydroimidazo[2,1-b][1,3]thiazole that has S configuration. It is used (generally as the monohydrochloride salt) to treat parasitic worm infections in pigs, sheep and cattle and was formerly used in humans as an adjuvant to chemotherapy for the treatment of various cancers. It is also widely used as an adulterant to coccaine.

Levamisole: An antihelminthic drug that has been tried experimentally in rheumatic disorders where it apparently restores the immune response by increasing macrophage chemotaxis and T-lymphocyte function. Paradoxically, this immune enhancement appears to be beneficial in rheumatoid arthritis where dermatitis, leukopenia, and thrombocytopenia, and nausea and vomiting have been reported as side effects. (From Smith and Reynard, Textbook of Pharmacology, 1991, p435-6)
6-phenyl-2,3,5,6-tetrahydroimidazo[2,1-b][1,3]thiazoleantinematodal drug;
antirheumatic drug;
EC 3.1.3.1 (alkaline phosphatase) inhibitor;
immunological adjuvant;
immunomodulator
levamisole hydrochlorideorganic molecular entity
1-(3,4-dihydroxyphenyl)-2-(1-imidazolyl)ethanonearomatic ketone
2-phenyl-1,2-benzisothiazol-3-(2h)-one2-phenyl-1,2-benzisothiazol-3-(2H)-one: structure given in first source; sulfur analog of ebselen
1-(3,4-dihydroxyphenyl)-2-[(4,6-dimethyl-2-pyrimidinyl)thio]ethanonearomatic ketone
6-fluoro-2-phenyl-1,2-benzothiazol-3-onebenzothiazoles
2-[4-methyl-3-(1-piperidinylsulfonyl)phenyl]-1,2-benzothiazol-3-onesulfonamide
2,5-dimethoxy-n-(quinolin-3-yl)benzenesulfonamide2,5-dimethoxy-N-(quinolin-3-yl)benzenesulfonamide: a tissue-nonspecific alkaline phosphatase inhibitor; structure in first sourcequinolines
2-[[3-(3-oxo-1,2-benzothiazol-2-yl)phenyl]sulfonylamino]benzoic acidsulfonamide
N,N-dimethyl-3-(3-oxo-1,2-benzothiazol-2-yl)benzenesulfonamidesulfonamide
3-nitrobenzaldehyde isonicotinoylhydrazone3-nitrobenzaldehyde isonicotinoylhydrazone: structure in first source
baci-imhomodetic cyclic peptide;
polypeptide;
zwitterion
antibacterial agent;
antimicrobial agent
2-(3-chlorophenyl)-1,2-benzothiazol-3-onebenzothiazoles
2-(4-fluorophenyl)-1,2-benzothiazol-3-onebenzothiazoles
salinazidaromatic carboxylic acid;
pyridinemonocarboxylic acid
phthivazide