Target type: cellularcomponent
Any protein complex that is part of a membrane. [GOC:dos]
Membrane protein complexes are intricate assemblies of multiple protein subunits, often embedded within cellular membranes. These complexes are essential for a wide array of cellular functions, including signal transduction, transport, and cell adhesion. The cellular component of a membrane protein complex encompasses the specific location and interactions within the membrane environment.
A membrane protein complex can be characterized by its location within the membrane:
* **Integral membrane proteins:** These proteins are embedded within the lipid bilayer, with at least one transmembrane domain that spans the entire membrane. They often play a crucial role in transport and signaling.
* **Peripheral membrane proteins:** These proteins are associated with the membrane surface, either through interactions with lipid head groups or with integral membrane proteins. They are often involved in signaling and cytoskeletal interactions.
The interactions within a membrane protein complex are equally important. Proteins within these complexes can interact through various mechanisms:
* **Hydrophobic interactions:** These interactions are driven by the exclusion of water from non-polar amino acids. They are particularly important for the association of transmembrane domains.
* **Ionic interactions:** These interactions occur between oppositely charged amino acids, contributing to the stability of the complex.
* **Hydrogen bonds:** These interactions form between polar amino acids, further stabilizing the complex.
* **Disulfide bonds:** These covalent bonds form between cysteine residues, providing strong structural support.
The organization and interactions within a membrane protein complex are highly dynamic and regulated. These complexes can undergo conformational changes in response to signals, leading to alterations in their function. The cellular component of a membrane protein complex is therefore a dynamic entity, constantly adapting to the needs of the cell.
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Protein | Definition | Taxonomy |
---|---|---|
Excitatory amino acid transporter 2 | An excitatory amino acid transporter 2 that is encoded in the genome of human. [PRO:DNx, UniProtKB:P43004] | Homo sapiens (human) |
Excitatory amino acid transporter 1 | An excitatory amino acid transporter 1 that is encoded in the genome of human. [PRO:DNx, UniProtKB:P43003] | Homo sapiens (human) |
Compound | Definition | Classes | Roles |
---|---|---|---|
alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid | alpha-Amino-3-hydroxy-5-methyl-4-isoxazolepropionic Acid: An IBOTENIC ACID homolog and glutamate agonist. The compound is the defining agonist for the AMPA subtype of glutamate receptors (RECEPTORS, AMPA). It has been used as a radionuclide imaging agent but is more commonly used as an experimental tool in cell biological studies. | non-proteinogenic alpha-amino acid | |
cysteine | cysteine; cysteine zwitterion; L-alpha-amino acid; proteinogenic amino acid; serine family amino acid | EC 4.3.1.3 (histidine ammonia-lyase) inhibitor; flour treatment agent; human metabolite | |
aspartic acid | aspartic acid : An alpha-amino acid that consists of succinic acid bearing a single alpha-amino substituent Aspartic Acid: One of the non-essential amino acids commonly occurring in the L-form. It is found in animals and plants, especially in sugar cane and sugar beets. It may be a neurotransmitter. L-aspartic acid : The L-enantiomer of aspartic acid. | aspartate family amino acid; aspartic acid; L-alpha-amino acid; proteinogenic amino acid | Escherichia coli metabolite; mouse metabolite; neurotransmitter |
d-glutamate | D-alpha-amino acid; glutamic acid | Escherichia coli metabolite; mouse metabolite | |
glutamic acid | glutamic acid : An alpha-amino acid that is glutaric acid bearing a single amino substituent at position 2. Glutamic Acid: A non-essential amino acid naturally occurring in the L-form. Glutamic acid is the most common excitatory neurotransmitter in the CENTRAL NERVOUS SYSTEM. | glutamic acid; glutamine family amino acid; L-alpha-amino acid; proteinogenic amino acid | Escherichia coli metabolite; ferroptosis inducer; micronutrient; mouse metabolite; neurotransmitter; nutraceutical |
d-aspartic acid | aspartic acid; D-alpha-amino acid | mouse metabolite | |
sym 2081 | |||
dihydrokainate | dicarboxylic acid | ||
serine o-sulfate | L-serine O-sulfate : A non-proteinogenic L-alpha-amino acid that is the O-sulfo derivative of L-serine. serine O-sulfate: RN given refers to (L)-isomer | L-serine derivative; non-proteinogenic L-alpha-amino acid; O-sulfoamino acid | |
hinokinin | hinokinin : A lignan that is dihydrofuran-2(3H)-one (gamma-butyrolactone) substituted by a 3,4-methylenedioxybenzyl group at positions 3 and 4 (the 3R,4R-diastereoisomer). hinokinin: suppresses expression of both HBsAg and HBeAg | benzodioxoles; gamma-lactone; lignan | trypanocidal drug |
3-hydroxyaspartic acid, (threo-l)-isomer | (3S)-3-hydroxy-L-aspartic acid : The (3S)-diastereomer of 3-hydroxy-L-aspartic acid. | 3-hydroxy-L-aspartic acid | metabolite |
2-amino-3-phenylmethoxybutanedioic acid | aspartic acid derivative | ||
l-ccg iii | |||
dl-threo-beta-benzyloxyaspartate | |||
ceftriaxone | 1,2,4-triazines; 1,3-thiazoles; cephalosporin; oxime O-ether | antibacterial drug; drug allergen; EC 3.5.2.6 (beta-lactamase) inhibitor | |
l-beta-threo-benzyl-aspartate | L-beta-threo-benzyl-aspartate: structure in first source | ||
ucph 101 | 2-amino-4-(4-methoxyphenyl)-7-(naphthalen-1-yl)-5-oxo-5,6,7,8-tetrahydro-4H-chromene-3-carbonitrile: structure in first source |