Target type: biologicalprocess
The chemical reactions and pathways resulting in the breakdown of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms. [GOC:ai]
Gamma-aminobutyric acid (GABA) catabolism is a crucial biological process in the nervous system, primarily occurring in glial cells, particularly astrocytes. It involves the breakdown of GABA into succinate, a key intermediate in the citric acid cycle. This process is catalyzed by two major enzymes:
1. **GABA transaminase (GABA-T):** This enzyme catalyzes the first step in GABA catabolism, transferring the amino group of GABA to α-ketoglutarate, forming succinic semialdehyde and glutamate.
2. **Succinic semialdehyde dehydrogenase (SSADH):** This enzyme catalyzes the second step, oxidizing succinic semialdehyde to succinate. The cofactor NAD+ is reduced to NADH in this step, providing reducing equivalents for other metabolic processes.
The breakdown of GABA in this pathway serves several important functions:
* **Regulation of GABA levels:** Catabolism ensures that GABA levels in the brain are maintained within a specific range, preventing excessive GABA accumulation, which could lead to neuronal inhibition.
* **Energy production:** Succinate produced by GABA catabolism enters the citric acid cycle, providing energy to the cell through ATP production.
* **Neurotransmitter recycling:** The glutamate produced by GABA-T can be used for the synthesis of other neurotransmitters, including glutamine and GABA itself.
The GABA catabolic process is tightly regulated by various factors, including:
* **Enzyme activity:** The activity of GABA-T and SSADH is regulated by factors such as substrate availability, cofactor levels, and feedback inhibition.
* **Hormonal control:** Hormones like thyroid hormones can influence the activity of GABA-T.
* **Glial cell function:** Glial cells play a crucial role in regulating GABA catabolism, ensuring efficient removal of GABA from the synaptic cleft and maintaining neuronal activity.
Disruption of GABA catabolism can lead to various neurological disorders, including:
* **GABA-T deficiency:** This genetic disorder results in accumulation of GABA and succinic semialdehyde in the brain, causing neurological symptoms like seizures, developmental delay, and mental retardation.
* **SSADH deficiency:** This genetic disorder affects the breakdown of succinic semialdehyde, leading to its accumulation in the brain, causing neurological symptoms such as seizures, cognitive impairment, and ataxia.
In conclusion, the GABA catabolic process is an essential mechanism in the nervous system, regulating GABA levels, contributing to energy production, and participating in neurotransmitter recycling. Its proper functioning is critical for maintaining brain health and preventing neurological disorders.'
"
Protein | Definition | Taxonomy |
---|---|---|
4-aminobutyrate aminotransferase, mitochondrial | A 4-aminobutyrate aminotransferase, mitochondrial that is encoded in the genome of human. [PRO:DNx, UniProtKB:P80404] | Homo sapiens (human) |
Succinate-semialdehyde dehydrogenase, mitochondrial | A succinate-semialdehyde dehydrogenase, mitochondrial that is encoded in the genome of human. [PRO:DNx, UniProtKB:P51649] | Homo sapiens (human) |
Compound | Definition | Classes | Roles |
---|---|---|---|
gamma-aminobutyric acid | gamma-aminobutyric acid : A gamma-amino acid that is butanoic acid with the amino substituent located at C-4. gamma-Aminobutyric Acid: The most common inhibitory neurotransmitter in the central nervous system. | amino acid zwitterion; gamma-amino acid; monocarboxylic acid | human metabolite; neurotransmitter; Saccharomyces cerevisiae metabolite; signalling molecule |
4-hydroxybenzyl alcohol | 4-hydroxybenzyl alcohol: the aglycone of gastrodin p-hydroxybenzyl alcohol : A member of the class of benzyl alcohols that is benzyl alcohol substituted by a hydroxy group at position 4. It has been isolated from Arcangelisia gusanlung. | benzyl alcohols; phenols | plant metabolite |
4-hydroxybenzaldehyde | hydroxybenzaldehyde | EC 1.14.17.1 (dopamine beta-monooxygenase) inhibitor; mouse metabolite; plant metabolite | |
4-hydroxybenzoic acid | 4-hydroxybenzoic acid : A monohydroxybenzoic acid that is benzoic acid carrying a hydroxy substituent at C-4 of the benzene ring. | monohydroxybenzoic acid | algal metabolite; plant metabolite |
anthranilic acid | anthranilic acid : An aminobenzoic acid that is benzoic acid having a single amino substituent located at position 2. It is a metabolite produced in L-tryptophan-kynurenine pathway in the central nervous system. anthranilic acid: RN given refers to parent cpd; structure in Negwer, 5th ed, #565 | aminobenzoic acid | human metabolite; mouse metabolite |
4-aminobenzoic acid | 4-aminobenzoic acid : An aminobenzoic acid in which the amino group is para to the carboxy group. 4-Aminobenzoic Acid: An aminobenzoic acid isomer that combines with pteridine and GLUTAMIC ACID to form FOLIC ACID. The fact that 4-aminobenzoic acid absorbs light throughout the UVB range has also resulted in its use as an ingredient in SUNSCREENS. 4-ammoniobenzoate : A zwitterion obtained by transfer of a proton from the carboxy to the amino group of 4-aminobenzoic acid. | aminobenzoic acid; aromatic amino-acid zwitterion | allergen; Escherichia coli metabolite; plant metabolite |
vanillin | Vanilla: A plant genus of the family ORCHIDACEAE that is the source of the familiar flavoring used in foods and medicines (FLAVORING AGENTS). | benzaldehydes; monomethoxybenzene; phenols | anti-inflammatory agent; anticonvulsant; antioxidant; flavouring agent; plant metabolite |
vigabatrin | gamma-amino acid | anticonvulsant; EC 2.6.1.19 (4-aminobutyrate--2-oxoglutarate transaminase) inhibitor | |
4-hydroxypropiophenone | acetophenones | ||
3-aminobenzoic acid | 3-aminobenzoic acid : An aminobenzoic acid carrying an amino group at position 3. 3-aminobenzoic acid: RN given refers to parent cpd | aminobenzoic acid | |
4-hydroxyacetophenone | 4-hydroxyacetophenone: promotes secretion of bile & bile salts, which promotes griseofulvin absorption in the duodenum 4'-hydroxyacetophenone : A monohydroxyacetophenone carrying a hydroxy substituent at position 4'. | monohydroxyacetophenone | fungal metabolite; mouse metabolite; plant metabolite |
4-anisaldehyde | 4-anisaldehyde: RN given refers to cpd with specified locants for methoxy moieties; structure in Merck, 9th ed, #696 p-methoxybenzaldehyde : A member of the class of benzaldehydes consisting of benzaldehyde itself carrying a methoxy substituent at position 4. | benzaldehydes | bacterial metabolite; human urinary metabolite; insect repellent; plant metabolite |
4-hydroxybenzylamine | 4-hydroxybenzylamine: RN given refers to parent cpd | aromatic amine | |
gastrodin | gastrodin: the glucoside of 4-hydroxybenzyl alcohol (gastrodigenin); isolated from Gastrodia elata Blume; | glycoside | |
baicalein | trihydroxyflavone | angiogenesis inhibitor; anti-inflammatory agent; antibacterial agent; anticoronaviral agent; antifungal agent; antineoplastic agent; antioxidant; apoptosis inducer; EC 1.13.11.31 (arachidonate 12-lipoxygenase) inhibitor; EC 1.13.11.33 (arachidonate 15-lipoxygenase) inhibitor; EC 3.4.21.26 (prolyl oligopeptidase) inhibitor; EC 3.4.22.69 (SARS coronavirus main proteinase) inhibitor; EC 4.1.1.17 (ornithine decarboxylase) inhibitor; ferroptosis inhibitor; geroprotector; hormone antagonist; plant metabolite; prostaglandin antagonist; radical scavenger | |
scutellarein | scutellarein : Flavone substituted with hydroxy groups at C-4', -5, -6 and -7. scutellarein: aglycone of scutellarin from Scutellaria baicalensis; carthamidin is 2S isomer of scutellarein; do not confuse with isoscutellarein and/or isocarthamidin which are respective regioisomers, or with the scutelarin protein | tetrahydroxyflavone | metabolite |
helicide | helicide: structure given in first source | glycoside |