Page last updated: 2024-10-24

deubiquitinase activity

Definition

Target type: molecularfunction

An isopeptidase activity that cleaves ubiquitin from a target protein to which it is conjugated. [GOC:mec, PMID:30783221]

Deubiquitinases (DUBs) are a diverse family of enzymes that catalyze the removal of ubiquitin (Ub) moieties from target proteins. Ubiquitination is a reversible post-translational modification that involves the attachment of Ub to a substrate protein, and it plays a critical role in regulating a wide range of cellular processes, including protein degradation, signal transduction, DNA repair, and immune responses. DUBs counterbalance the action of ubiquitin ligases (E3s), which attach Ub to substrates. They do this by hydrolyzing the isopeptide bond that links Ub to the target protein, releasing free Ub and the deubiquitinated substrate. DUBs possess a highly conserved catalytic cysteine residue within their active site that is essential for the hydrolysis reaction.
DUBs are classified into six major families based on their structural and functional characteristics: Ubiquitin-specific proteases (USPs), Ubiquitin C-terminal hydrolases (UCHs), Ovarian tumor domain (OTU) proteases, Josephin domain proteases, Machado-Joseph disease protein domain (MJD) proteases, and Deubiquitinase with a Zinc finger domain (Znf-DUB).
DUBs are essential for maintaining cellular homeostasis and are implicated in a variety of human diseases. Dysregulation of DUB activity can lead to aberrant protein degradation, impaired signal transduction, and developmental defects. For example, mutations in DUB genes have been linked to cancer, neurodegenerative disorders, and immune system dysfunction.'
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Proteins (5)

ProteinDefinitionTaxonomy
Ubiquitin carboxyl-terminal hydrolase 15A ubiquitin carboxyl-terminal hydrolase 15 that is encoded in the genome of human. [PRO:DNx, UniProtKB:Q9Y4E8]Homo sapiens (human)
Ubiquitin carboxyl-terminal hydrolase 47A ubiquitin carboxyl-terminal hydrolase 47 that is encoded in the genome of human. [PRO:DNx, UniProtKB:Q96K76]Homo sapiens (human)
Ubiquitin carboxyl-terminal hydrolase 7A ubiquitin carboxyl-terminal hydrolase 7 that is encoded in the genome of human. [PRO:DNx, UniProtKB:Q93009]Homo sapiens (human)
Probable ubiquitin carboxyl-terminal hydrolase FAF-XA probable ubiquitin carboxyl-terminal hydrolase FAF-X that is encoded in the genome of human. [PRO:DNx, UniProtKB:Q93008]Homo sapiens (human)
Ubiquitin carboxyl-terminal hydrolase 5A ubiquitin carboxyl-terminal hydrolase 5 that is encoded in the genome of human. [PRO:DNx, UniProtKB:P45974]Homo sapiens (human)

Compounds (11)

CompoundDefinitionClassesRoles
ursolic acidhydroxy monocarboxylic acid;
pentacyclic triterpenoid
geroprotector;
plant metabolite
benzoylpropionic acid4-oxo-4-phenylbutyric acid : A 4-oxo monocarboxylic acid that is butyric acid bearing oxo and phenyl substituents at position 4.

benzoylpropionic acid: structure in first source
4-oxo monocarboxylic acidhapten
celastrolmonocarboxylic acid;
pentacyclic triterpenoid
anti-inflammatory drug;
antineoplastic agent;
antioxidant;
EC 5.99.1.3 [DNA topoisomerase (ATP-hydrolysing)] inhibitor;
Hsp90 inhibitor;
metabolite
xestoquinonexestoquinone: structure given in first source; RN given refers to the (S)-isomer; RN for cpd without isomeric designation not available 5/91; isolated from the sea sponge Xestospongia sapra
bardoxolone methylmethyl 2-cyano-3,12-dioxooleana-1,9(11)-dien-28-oate: structure in first sourcecyclohexenones
p5091P5091: inhibits ubiquitin-specific protease 7; structure in first source
acetyl isogambogic acidacetyl isogambogic acid: structure in first source
degrasyndegrasyn: a JAK2 kinase inhibitor that induces rapid degradation of c-Myc protein in MM-1 multiple myeloma and other tumor cell lines; structure in first source
vialinin avialinin A: free radical scavenger from an edible mushroom in China; structure in first source
hbx 41108HBX 41,108: inhibits USP7 ubiquitin protease; structure in first source
1-(5-((2,4-difluorophenyl)thio)-4-nitrothiophen-2-yl)ethanone1-(5-((2,4-difluorophenyl)thio)-4-nitrothiophen-2-yl)ethanone: a USP7 inhibitor; structure in first source