Page last updated: 2024-08-07 16:21:48

Retinoic acid receptor RXR-beta

A retinoic acid receptor RXR-beta that is encoded in the genome of human. [PRO:DNx, UniProtKB:P28702]

Synonyms

Nuclear receptor subfamily 2 group B member 2;
Retinoid X receptor beta

Research

Bioassay Publications (21)

TimeframeStudies on this Protein(%)All Drugs %
pre-19900 (0.00)18.7374
1990's8 (38.10)18.2507
2000's5 (23.81)29.6817
2010's6 (28.57)24.3611
2020's2 (9.52)2.80

Compounds (22)

Drugs with Inhibition Measurements

DrugTaxonomyMeasurementAverage (mM)Bioassay(s)Publication(s)
lg 100268Homo sapiens (human)Ki0.041222
bexaroteneHomo sapiens (human)Ki0.013422
hx 600Homo sapiens (human)Ki0.640011
tretinoinHomo sapiens (human)IC501.000011
tretinoinHomo sapiens (human)Ki0.311833
alitretinoinHomo sapiens (human)IC500.012011
alitretinoinHomo sapiens (human)Ki0.006733
lg 100567Homo sapiens (human)Ki0.285112
fenretinideHomo sapiens (human)Ki2.800011
4-(2-(5,6,7,8-tetrahydro-5,5,8,8-tetramethyl-2-naphthalenyl)-1-propenyl)benzoic acidHomo sapiens (human)IC501.000011
lg100754Homo sapiens (human)Ki0.009011
lg 1506Homo sapiens (human)Ki0.011022
hx 630Homo sapiens (human)Ki0.400011
way 252623Homo sapiens (human)IC5010.000011

Drugs with Activation Measurements

DrugTaxonomyMeasurementAverage (mM)Bioassay(s)Publication(s)
oxaprozinHomo sapiens (human)EC5025.000011
pirinixic acidHomo sapiens (human)EC5013.000011
bexaroteneHomo sapiens (human)EC500.043566
dehydroabietic acidHomo sapiens (human)EC5042.000011
sr 11237Homo sapiens (human)EC500.180011
isopimaric acidHomo sapiens (human)EC5032.000011
tretinoinHomo sapiens (human)EC501.049644
tretinoinHomo sapiens (human)Kd0.000011
alitretinoinHomo sapiens (human)EC500.106366
alitretinoinHomo sapiens (human)Kd0.025022
sr 11217Homo sapiens (human)EC500.980011
lg 100567Homo sapiens (human)EC500.087011
4-(2-(5,6,7,8-tetrahydro-5,5,8,8-tetramethyl-2-naphthalenyl)-1-propenyl)benzoic acidHomo sapiens (human)EC5010.000011
valerenic acidHomo sapiens (human)EC505.200011
lg100754Homo sapiens (human)EC500.013011
nrx 194204Homo sapiens (human)EC500.000811
nrx 194204Homo sapiens (human)Kd0.003611
agn 194204Homo sapiens (human)Kd0.002511
bms 687453Homo sapiens (human)EC5025.000011

Enables

This protein enables 9 target(s):

TargetCategoryDefinition
RNA polymerase II transcription regulatory region sequence-specific DNA bindingmolecular functionBinding to a specific sequence of DNA that is part of a regulatory region that controls the transcription of a gene or cistron by RNA polymerase II. [GOC:txnOH]
DNA-binding transcription factor activity, RNA polymerase II-specificmolecular functionA DNA-binding transcription factor activity that modulates the transcription of specific gene sets transcribed by RNA polymerase II. [GOC:txnOH-2018]
DNA-binding transcription activator activity, RNA polymerase II-specificmolecular functionA DNA-binding transcription factor activity that activates or increases transcription of specific gene sets transcribed by RNA polymerase II. [GOC:aruk, GOC:txnOH-2018, PMID:20737563, PMID:27145859]
nuclear steroid receptor activitymolecular functionCombining with a steroid hormone and transmitting the signal within the cell to initiate a change in cell activity or function. [GOC:signaling, PMID:14708019]
nuclear receptor activitymolecular functionA DNA-binding transcription factor activity regulated by binding to a ligand that modulates the transcription of specific gene sets transcribed by RNA polymerase II. Nuclear receptor ligands are usually lipid-based (such as a steroid hormone) and the binding of the ligand to its receptor often occurs in the cytosol, which leads to its translocation to the nucleus. [GOC:txnOH-2018, PMID:23457262]
protein bindingmolecular functionBinding to a protein. [GOC:go_curators]
zinc ion bindingmolecular functionBinding to a zinc ion (Zn). [GOC:ai]
sequence-specific double-stranded DNA bindingmolecular functionBinding to double-stranded DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA, e.g. promotor binding or rDNA binding. [GOC:dos, GOC:sl]
retinoic acid-responsive element bindingmolecular functionBinding to a retinoic acid-responsive element, a variable direct repeat of the sequence PuGGTCA spaced by five nucleotides (DR5) found in the promoters of retinoic acid-responsive genes, to which retinoic acid receptors bind. [GOC:jl, GOC:vw, GOC:yaf, PMID:11327309, PMID:19917671]

Located In

This protein is located in 4 target(s):

TargetCategoryDefinition
nucleuscellular componentA membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. [GOC:go_curators]
nucleoplasmcellular componentThat part of the nuclear content other than the chromosomes or the nucleolus. [GOC:ma, ISBN:0124325653]
nucleoluscellular componentA small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome. [ISBN:0198506732]
cytosolcellular componentThe part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. [GOC:hjd, GOC:jl]

Part Of

This protein is part of 2 target(s):

TargetCategoryDefinition
RNA polymerase II transcription regulator complexcellular componentA transcription factor complex that acts at a regulatory region of a gene transcribed by RNA polymerase II. [GOC:tb]
chromatincellular componentThe ordered and organized complex of DNA, protein, and sometimes RNA, that forms the chromosome. [GOC:elh, PMID:20404130]

Involved In

This protein is involved in 11 target(s):

TargetCategoryDefinition
hormone-mediated signaling pathwaybiological processThe series of molecular signals mediated by the detection of a hormone. [GOC:sm]
positive regulation of bone mineralizationbiological processAny process that activates or increases the frequency, rate or extent of bone mineralization. [GOC:go_curators]
mRNA transcription by RNA polymerase IIbiological processThe cellular synthesis of messenger RNA (mRNA) from a DNA template by RNA polymerase II, originating at an RNA polymerase II promoter. [GOC:jl, ISBN:0321000382]
steroid hormone mediated signaling pathwaybiological processThe series of molecular signals mediated by a steroid hormone binding to a receptor. [PMID:12606724]
positive regulation of DNA-templated transcriptionbiological processAny process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription. [GOC:go_curators, GOC:txnOH]
positive regulation of transcription by RNA polymerase IIbiological processAny process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter. [GOC:go_curators, GOC:txnOH]
positive regulation of vitamin D receptor signaling pathwaybiological processAny process that activates or increases the frequency, rate or extent of vitamin D receptor signaling pathway activity. [GOC:BHF, GOC:mah]
anatomical structure developmentbiological processThe biological process whose specific outcome is the progression of an anatomical structure from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure, whatever form that may be including its natural destruction. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome. [GO_REF:0000021]
cell differentiationbiological processThe cellular developmental process in which a relatively unspecialized cell, e.g. embryonic or regenerative cell, acquires specialized structural and/or functional features that characterize a specific cell. Differentiation includes the processes involved in commitment of a cell to a specific fate and its subsequent development to the mature state. [ISBN:0198506732]
retinoic acid receptor signaling pathwaybiological processThe series of molecular signals generated as a consequence of a retinoic acid receptor binding to one of its physiological ligands. [GOC:dgh]
response to retinoic acidbiological processAny process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a retinoic acid stimulus. [GOC:sl]