Page last updated: 2024-10-24

slit diaphragm

Definition

Target type: cellularcomponent

A specialized cell-cell junction found between the interdigitating foot processes of the glomerular epithelium (the podocytes) in the vertebrate kidney, which is adapted for facilitating glomerular filtration. [GOC:mtg_kidney_jan10, GOC:rph, PMID:12386277, PMID:15994232, PMID:18971929, PMID:19478094]

The slit diaphragm (SD) is a specialized cell-cell junction found exclusively between podocytes, the epithelial cells that wrap around capillaries in the glomerulus of the kidney. It plays a critical role in filtering blood and maintaining the integrity of the glomerular filtration barrier. The SD is composed of a complex network of transmembrane proteins and associated cytoplasmic proteins that interact to form a highly selective barrier. The structure of the SD can be broadly divided into three main components:

**1. Transmembrane proteins:** These proteins span the plasma membrane of adjacent podocytes and form the core structure of the SD. The key transmembrane proteins include:

* **Nephrin:** A type I transmembrane protein that acts as the central scaffold for SD assembly. Nephrin molecules from adjacent podocytes interact via their extracellular domains to form a zipper-like structure.
* **Podocin:** A transmembrane protein that interacts with nephrin and is essential for proper SD function. It contributes to the stability and curvature of the SD.
* **CD2AP:** A cytoplasmic adaptor protein that links nephrin to the actin cytoskeleton, providing structural support and regulating SD assembly.
* **P-cadherin:** A calcium-dependent cell adhesion molecule that contributes to the adhesive properties of the SD and interacts with nephrin.
* **FAT1:** A large transmembrane protein with a large extracellular domain, contributing to the organization and stability of the SD.

**2. Cytoplasmic proteins:** These proteins are located on the cytoplasmic side of the plasma membrane and interact with transmembrane proteins to regulate SD function. Important cytoplasmic proteins include:

* **Nck:** An adaptor protein that binds to nephrin and recruits other signaling molecules to the SD.
* **ZO-1:** A tight junction protein that interacts with the cytoplasmic tails of nephrin and CD2AP, contributing to the integrity and stability of the SD.
* **α-actinin-4:** An actin-binding protein that links the SD to the actin cytoskeleton.
* **Synaptopodin:** A protein that interacts with nephrin and podocin, contributing to the regulation of podocyte cytoskeletal dynamics.

**3. Extracellular matrix:** The space between the two podocytes, where the SD is located, is filled with a specialized extracellular matrix (ECM). This ECM contains a variety of molecules, including:

* **Heparan sulfate proteoglycans:** These molecules contribute to the selective permeability of the SD by interacting with specific proteins in the filtrate.
* **Collagen IV:** Provides structural support and helps maintain the integrity of the SD.
* **Laminin:** A component of the basement membrane that interacts with both the SD and the podocyte cytoskeleton.

The SD is highly dynamic and undergoes constant remodeling in response to changes in filtration pressure and other physiological stimuli. Its complex structure and regulation ensure the efficient filtration of blood and the prevention of proteinuria, a hallmark of kidney disease. Disruptions in the assembly, function, or integrity of the SD can lead to various forms of glomerular disease, highlighting the importance of this specialized cell-cell junction for kidney health.'"

Proteins (2)

ProteinDefinitionTaxonomy
Short transient receptor potential channel 6A short transient receptor potential channel 6 that is encoded in the genome of human. [PRO:DNx, UniProtKB:Q9Y210]Homo sapiens (human)
Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoformA protein phosphatase 3 catalytic subunit alpha that is encoded in the genome of human. [PRO:CNA, UniProtKB:Q08209]Homo sapiens (human)

Compounds (4)

CompoundDefinitionClassesRoles
clemizoleclemizole : A member of the class of benzimidazoles that is 1H-benzimidazole substituted by a pyrrolidin-1-ylmethyl and a 4-chlorobenzyl groups at positions 2 and 1 respectively.

clemizole: was heading 1966-94 (see under BENZIMIDAZOLES 1966-90); use BENZIMIDAZOLES to search CLEMIZOLE 1966-94; a histamine H1- blocker used to treat allergies
benzimidazoles;
monochlorobenzenes;
pyrrolidines
histamine antagonist
tacrolimustacrolimus (anhydrous) : A macrolide lactam containing a 23-membered lactone ring, originally isolated from the fermentation broth of a Japanese soil sample that contained the bacteria Streptomyces tsukubaensis.

Tacrolimus: A macrolide isolated from the culture broth of a strain of Streptomyces tsukubaensis that has strong immunosuppressive activity in vivo and prevents the activation of T-lymphocytes in response to antigenic or mitogenic stimulation in vitro.
macrolide lactambacterial metabolite;
immunosuppressive agent
tamoxifenstilbenoid;
tertiary amino compound
angiogenesis inhibitor;
antineoplastic agent;
bone density conservation agent;
EC 1.2.3.1 (aldehyde oxidase) inhibitor;
EC 2.7.11.13 (protein kinase C) inhibitor;
estrogen antagonist;
estrogen receptor antagonist;
estrogen receptor modulator
cyclosporineramihyphin A: one of the metabolites produced by Fusarium sp. S-435; RN given refers to cpd with unknown MFhomodetic cyclic peptideanti-asthmatic drug;
anticoronaviral agent;
antifungal agent;
antirheumatic drug;
carcinogenic agent;
dermatologic drug;
EC 3.1.3.16 (phosphoprotein phosphatase) inhibitor;
geroprotector;
immunosuppressive agent;
metabolite