Page last updated: 2024-10-24

regulation of stem cell population maintenance

Definition

Target type: biologicalprocess

Any process that modulates the frequency, rate or extent of stem cell population maintenance. [GOC:obol]

Stem cell population maintenance is a tightly regulated process that ensures the appropriate balance between self-renewal, differentiation, and elimination. This delicate balance is crucial for maintaining tissue homeostasis and preventing uncontrolled growth or depletion.

**1. Intrinsic Mechanisms:**

* **Transcriptional Regulation:** Specific transcription factors, such as Oct4, Sox2, and Nanog, are master regulators of stem cell identity. They control the expression of genes essential for self-renewal and pluripotency. These factors are often regulated by signaling pathways like Wnt, Shh, and TGF-β.
* **Epigenetic Modifications:** Modifications to DNA and histone proteins, such as methylation and acetylation, play a role in maintaining the stem cell state. These modifications can alter gene expression without changing the underlying DNA sequence.
* **MicroRNAs:** Small non-coding RNAs called microRNAs (miRNAs) can regulate gene expression by targeting specific mRNAs for degradation or translational repression. Some miRNAs are involved in controlling stem cell self-renewal and differentiation.
* **Telomere Maintenance:** Stem cells have mechanisms to maintain their telomeres, the protective caps at the ends of chromosomes, which prevent DNA damage and promote long-term self-renewal.

**2. Extrinsic Mechanisms:**

* **Niche Signaling:** Stem cells reside in specialized microenvironments called niches, which provide signals that regulate their fate. These signals can include growth factors, cytokines, and extracellular matrix components.
* **Cell-Cell Interactions:** Stem cells interact with other cell types in their niche, including supporting cells and neighboring differentiated cells. These interactions can influence stem cell behavior through direct contact or secreted factors.
* **Metabolic Regulation:** Stem cell metabolism is tightly regulated and often differs from that of differentiated cells. Metabolic pathways, such as glycolysis and oxidative phosphorylation, can impact stem cell fate and function.

**3. Regulation of Self-Renewal:**

* **Symmetric Division:** Stem cells can divide symmetrically, producing two identical daughter cells that maintain their stem cell properties. This process is critical for maintaining the stem cell pool.
* **Asymmetric Division:** Stem cells can also divide asymmetrically, producing one daughter cell that retains stem cell properties and another that differentiates into a specialized cell type. This process allows for tissue renewal while maintaining the stem cell population.

**4. Regulation of Differentiation:**

* **Signaling Pathways:** Various signaling pathways, including Wnt, Shh, and TGF-β, regulate stem cell differentiation by controlling the expression of lineage-specific genes.
* **Transcriptional Networks:** Specific transcription factors control the expression of genes that drive differentiation along specific cell lineages.
* **Epigenetic Changes:** Epigenetic modifications, such as histone modifications and DNA methylation, can influence the activation of genes involved in differentiation.

**5. Regulation of Elimination:**

* **Apoptosis:** Stem cells that have accumulated damage or are no longer needed are eliminated through programmed cell death, or apoptosis.
* **Senescence:** Stem cells can enter a state of senescence, where they lose their ability to divide and contribute to tissue regeneration.
* **Other Mechanisms:** Other mechanisms, such as autophagy and microenvironment-mediated elimination, also play a role in regulating stem cell population size.'
"

Proteins (3)

ProteinDefinitionTaxonomy
Lysine-specific demethylase 3AA lysine-specific demethylase 3A that is encoded in the genome of human. [PRO:DNx, UniProtKB:Q9Y4C1]Homo sapiens (human)
Histone acetyltransferase KAT2AA histone acetyltransferase KAT2A that is encoded in the genome of human. [PRO:DNx, UniProtKB:Q92830]Homo sapiens (human)
ELAV-like protein 1An ELAV-like protein 1 that is encoded in the genome of human. [PRO:DNx, UniProtKB:Q15717]Homo sapiens (human)

Compounds (10)

CompoundDefinitionClassesRoles
2,4-pyridinedicarboxylic acidlutidinic acid : A pyridinedicarboxylic acid carrying carboxy groups at positions 2 and 4.pyridinedicarboxylic acid
5,8-dihydroxy-3-methyl-4-(9h)-naphtho(2,3-c)furanone5,8-dihydroxy-3-methyl-4-(9H)-naphtho(2,3-c)furanone: isolated from Micromonospora sp. KY7123; structure given in first source
5-carboxy-8-hydroxyquinoline5-carboxy-8-hydroxyquinoline: a JmjC histone demethylase inhibitor; structure in first sourcequinolines
(1R,2S)-tranylcypromine hydrochloride(1R,2S)-tranylcypromine hydrochloride : A hydrochloride obtained by combining (1R,2S)-tranylcypromine with one equivalent of hydrochloric acid.hydrochloride
oxalylglycineN-oxalylglycine : An amino dicarboxylic acid that is iminodiacetic acid with an oxo substituent. It is used as an inhibitor of alpha-ketoglutarate dependent (EC 1.14.11.*) enzymes.

oxalylglycine: structure given in first source
amino dicarboxylic acid;
N-acylglycine
EC 1.14.11.* (oxidoreductase acting on paired donors, 2-oxoglutarate as one donor, incorporating 1 atom each of oxygen into both donors) inhibitor
quercetin7-hydroxyflavonol;
pentahydroxyflavone
antibacterial agent;
antineoplastic agent;
antioxidant;
Aurora kinase inhibitor;
chelator;
EC 1.10.99.2 [ribosyldihydronicotinamide dehydrogenase (quinone)] inhibitor;
geroprotector;
phytoestrogen;
plant metabolite;
protein kinase inhibitor;
radical scavenger
Dihydrotanshinone Idihydrotanshinone I: extracted from Radix Salviaeabietane diterpenoidanticoronaviral agent
3-furancarboxylic acid, tetrahydro-4-methylene-5-oxo-2-propyl-, (2r,3s)-rel-gamma-lactone
i-bet726
3-[[2-(2-pyridinyl)-6-(1,2,4,5-tetrahydro-3-benzazepin-3-yl)-4-pyrimidinyl]amino]propanoic acidorganonitrogen heterocyclic compound