Target type: biologicalprocess
Any process that modulates the frequency, rate or extent of stem cell population maintenance. [GOC:obol]
Stem cell population maintenance is a tightly regulated process that ensures the appropriate balance between self-renewal, differentiation, and elimination. This delicate balance is crucial for maintaining tissue homeostasis and preventing uncontrolled growth or depletion.
**1. Intrinsic Mechanisms:**
* **Transcriptional Regulation:** Specific transcription factors, such as Oct4, Sox2, and Nanog, are master regulators of stem cell identity. They control the expression of genes essential for self-renewal and pluripotency. These factors are often regulated by signaling pathways like Wnt, Shh, and TGF-β.
* **Epigenetic Modifications:** Modifications to DNA and histone proteins, such as methylation and acetylation, play a role in maintaining the stem cell state. These modifications can alter gene expression without changing the underlying DNA sequence.
* **MicroRNAs:** Small non-coding RNAs called microRNAs (miRNAs) can regulate gene expression by targeting specific mRNAs for degradation or translational repression. Some miRNAs are involved in controlling stem cell self-renewal and differentiation.
* **Telomere Maintenance:** Stem cells have mechanisms to maintain their telomeres, the protective caps at the ends of chromosomes, which prevent DNA damage and promote long-term self-renewal.
**2. Extrinsic Mechanisms:**
* **Niche Signaling:** Stem cells reside in specialized microenvironments called niches, which provide signals that regulate their fate. These signals can include growth factors, cytokines, and extracellular matrix components.
* **Cell-Cell Interactions:** Stem cells interact with other cell types in their niche, including supporting cells and neighboring differentiated cells. These interactions can influence stem cell behavior through direct contact or secreted factors.
* **Metabolic Regulation:** Stem cell metabolism is tightly regulated and often differs from that of differentiated cells. Metabolic pathways, such as glycolysis and oxidative phosphorylation, can impact stem cell fate and function.
**3. Regulation of Self-Renewal:**
* **Symmetric Division:** Stem cells can divide symmetrically, producing two identical daughter cells that maintain their stem cell properties. This process is critical for maintaining the stem cell pool.
* **Asymmetric Division:** Stem cells can also divide asymmetrically, producing one daughter cell that retains stem cell properties and another that differentiates into a specialized cell type. This process allows for tissue renewal while maintaining the stem cell population.
**4. Regulation of Differentiation:**
* **Signaling Pathways:** Various signaling pathways, including Wnt, Shh, and TGF-β, regulate stem cell differentiation by controlling the expression of lineage-specific genes.
* **Transcriptional Networks:** Specific transcription factors control the expression of genes that drive differentiation along specific cell lineages.
* **Epigenetic Changes:** Epigenetic modifications, such as histone modifications and DNA methylation, can influence the activation of genes involved in differentiation.
**5. Regulation of Elimination:**
* **Apoptosis:** Stem cells that have accumulated damage or are no longer needed are eliminated through programmed cell death, or apoptosis.
* **Senescence:** Stem cells can enter a state of senescence, where they lose their ability to divide and contribute to tissue regeneration.
* **Other Mechanisms:** Other mechanisms, such as autophagy and microenvironment-mediated elimination, also play a role in regulating stem cell population size.'
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Protein | Definition | Taxonomy |
---|---|---|
Lysine-specific demethylase 3A | A lysine-specific demethylase 3A that is encoded in the genome of human. [PRO:DNx, UniProtKB:Q9Y4C1] | Homo sapiens (human) |
Histone acetyltransferase KAT2A | A histone acetyltransferase KAT2A that is encoded in the genome of human. [PRO:DNx, UniProtKB:Q92830] | Homo sapiens (human) |
ELAV-like protein 1 | An ELAV-like protein 1 that is encoded in the genome of human. [PRO:DNx, UniProtKB:Q15717] | Homo sapiens (human) |
Compound | Definition | Classes | Roles |
---|---|---|---|
2,4-pyridinedicarboxylic acid | lutidinic acid : A pyridinedicarboxylic acid carrying carboxy groups at positions 2 and 4. | pyridinedicarboxylic acid | |
5,8-dihydroxy-3-methyl-4-(9h)-naphtho(2,3-c)furanone | 5,8-dihydroxy-3-methyl-4-(9H)-naphtho(2,3-c)furanone: isolated from Micromonospora sp. KY7123; structure given in first source | ||
5-carboxy-8-hydroxyquinoline | 5-carboxy-8-hydroxyquinoline: a JmjC histone demethylase inhibitor; structure in first source | quinolines | |
(1R,2S)-tranylcypromine hydrochloride | (1R,2S)-tranylcypromine hydrochloride : A hydrochloride obtained by combining (1R,2S)-tranylcypromine with one equivalent of hydrochloric acid. | hydrochloride | |
oxalylglycine | N-oxalylglycine : An amino dicarboxylic acid that is iminodiacetic acid with an oxo substituent. It is used as an inhibitor of alpha-ketoglutarate dependent (EC 1.14.11.*) enzymes. oxalylglycine: structure given in first source | amino dicarboxylic acid; N-acylglycine | EC 1.14.11.* (oxidoreductase acting on paired donors, 2-oxoglutarate as one donor, incorporating 1 atom each of oxygen into both donors) inhibitor |
quercetin | 7-hydroxyflavonol; pentahydroxyflavone | antibacterial agent; antineoplastic agent; antioxidant; Aurora kinase inhibitor; chelator; EC 1.10.99.2 [ribosyldihydronicotinamide dehydrogenase (quinone)] inhibitor; geroprotector; phytoestrogen; plant metabolite; protein kinase inhibitor; radical scavenger | |
Dihydrotanshinone I | dihydrotanshinone I: extracted from Radix Salviae | abietane diterpenoid | anticoronaviral agent |
3-furancarboxylic acid, tetrahydro-4-methylene-5-oxo-2-propyl-, (2r,3s)-rel- | gamma-lactone | ||
i-bet726 | |||
3-[[2-(2-pyridinyl)-6-(1,2,4,5-tetrahydro-3-benzazepin-3-yl)-4-pyrimidinyl]amino]propanoic acid | organonitrogen heterocyclic compound |