Page last updated: 2024-10-24

homocysteine metabolic process

Definition

Target type: biologicalprocess

The chemical reactions and pathways involving homocysteine, the amino acid alpha-amino-gamma-mercaptobutanoic acid. Homocysteine is an important intermediate in the metabolic reactions of its S-methyl derivative, methionine. [ISBN:0198506732]

Homocysteine metabolism is a crucial metabolic process that involves the conversion of the amino acid homocysteine into methionine or cysteine. This process is essential for maintaining normal cellular function and preventing various health issues.

**1. Homocysteine Synthesis:**

Homocysteine is produced during the breakdown of methionine, an essential amino acid obtained from the diet. Methionine is converted into S-adenosyl methionine (SAM), which is a vital methyl donor in many metabolic reactions. After donating its methyl group, SAM is converted to S-adenosyl homocysteine (SAH), which is then hydrolyzed to homocysteine.

**2. Homocysteine Catabolism:**

Homocysteine can be metabolized through two main pathways:

**a) Remethylation:**

This pathway involves the conversion of homocysteine back to methionine using the enzyme tetrahydrofolate reductase (THF reductase). This reaction requires vitamin B12 and folate as coenzymes.

**b) Transsulfuration:**

This pathway involves the conversion of homocysteine to cysteine using the enzymes cystathionine beta-synthase (CBS) and cystathionine gamma-lyase (CSE). This reaction requires vitamin B6 as a coenzyme.

**3. Regulation of Homocysteine Metabolism:**

The activity of the enzymes involved in homocysteine metabolism is regulated by various factors, including:

- Dietary intake of methionine, folate, and vitamin B12
- Genetic variations in the genes encoding the enzymes
- Hormonal factors
- Lifestyle factors

**4. Importance of Homocysteine Metabolism:**

Proper homocysteine metabolism is essential for several reasons:

- **Methionine synthesis:** Methionine is required for protein synthesis, neurotransmitter production, and many other metabolic processes.
- **Cysteine synthesis:** Cysteine is a precursor for glutathione, a powerful antioxidant that protects cells from damage.
- **Cardiovascular health:** Elevated homocysteine levels are associated with an increased risk of cardiovascular disease.
- **Neurological health:** Homocysteine is involved in the development of Alzheimer's disease and other neurological disorders.

**5. Homocysteine Disorders:**

Disorders of homocysteine metabolism can lead to:

- **Hyperhomocysteinemia:** Elevated homocysteine levels in the blood.
- **Homocystinuria:** A genetic disorder characterized by high levels of homocysteine in the urine.

**6. Factors Affecting Homocysteine Levels:**

Factors that can affect homocysteine levels include:

- **Dietary intake:** A diet high in methionine and low in folate, vitamin B12, and B6 can lead to elevated homocysteine levels.
- **Genetic factors:** Certain genetic variations can increase the risk of hyperhomocysteinemia.
- **Lifestyle factors:** Smoking, alcohol consumption, and physical inactivity can increase homocysteine levels.

**7. Management of Homocysteine Levels:**

Management of homocysteine levels may involve:

- **Dietary modifications:** Increasing folate, vitamin B12, and B6 intake through diet or supplementation.
- **Lifestyle changes:** Quitting smoking, reducing alcohol consumption, and engaging in regular physical activity.
- **Pharmacological therapy:** In severe cases, medications may be used to lower homocysteine levels.'
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Proteins (2)

ProteinDefinitionTaxonomy
NADPH oxidase 4An NADPH oxidase 4 that is encoded in the genome of human. [PRO:WCB, UniProtKB:Q9NPH5]Homo sapiens (human)
Cystathionine beta-synthaseA cystathionine beta-synthase that is encoded in the genome of human. [PRO:DNx, UniProtKB:P35520]Homo sapiens (human)

Compounds (16)

CompoundDefinitionClassesRoles
aminooxyacetic acid(aminooxy)acetic acid : A member of the class of hydroxylamines that is acetic acid substituted at postion 2 by an aminooxy group. It is a compound which inhibits aminobutyrate aminotransferase activity in vivo, resulting in increased levels of gamma-aminobutyric acid in tissues.

Aminooxyacetic Acid: A compound that inhibits aminobutyrate aminotransferase activity in vivo, thereby raising the level of gamma-aminobutyric acid in tissues.
amino acid;
hydroxylamines;
monocarboxylic acid
anticonvulsant;
EC 2.6.1.19 (4-aminobutyrate--2-oxoglutarate transaminase) inhibitor;
EC 4.2.1.22 (cystathionine beta-synthase) inhibitor;
nootropic agent
aurintricarboxylic acidaurintricarboxylic acid : A member of the class of quinomethanes that is 3-methylidene-6-oxocyclohexa-1,4-diene-1-carboxylic acid in which the methylidene hydrogens are replaced by 4-carboxy-3-hydroxyphenyl groups. The trisodium salt is the biological stain 'chrome violet CG' while the triammonium salt is 'aluminon'.

Aurintricarboxylic Acid: A dye which inhibits protein biosynthesis at the initial stages. The ammonium salt (aluminon) is a reagent for the colorimetric estimation of aluminum in water, foods, and tissues.
monohydroxybenzoic acid;
quinomethanes;
tricarboxylic acid
fluorochrome;
histological dye;
insulin-like growth factor receptor 1 antagonist
hypericin
2-hydroxy-5-(2,5-dihydrobenzyl)aminobenzoic acidaromatic amine
staurosporineindolocarbazole alkaloid;
organic heterooctacyclic compound
apoptosis inducer;
bacterial metabolite;
EC 2.7.11.13 (protein kinase C) inhibitor;
geroprotector
quercetin7-hydroxyflavonol;
pentahydroxyflavone
antibacterial agent;
antineoplastic agent;
antioxidant;
Aurora kinase inhibitor;
chelator;
EC 1.10.99.2 [ribosyldihydronicotinamide dehydrogenase (quinone)] inhibitor;
geroprotector;
phytoestrogen;
plant metabolite;
protein kinase inhibitor;
radical scavenger
3,7-dimethoxy-5,3',4'-trihydroxyflavone3,7-dimethoxy-5,3',4'-trihydroxyflavone: isolated from Veronia eremophila; structure given in first source

3',4',5-trihydroxy-3,7-dimethoxyflavone : A dimethoxyflavone that the 3,7-di-O-methyl derivative of quercetin.
dimethoxyflavone;
trihydroxyflavone
EC 1.3.1.22 [3-oxo-5alpha-steroid 4-dehydrogenase (NADP(+))] inhibitor;
metabolite
apigeninChamomile: Common name for several daisy-like plants (MATRICARIA; TRIPLEUROSPERMUM; ANTHEMIS; CHAMAEMELUM) native to Europe and Western Asia, now naturalized in the United States and Australia.trihydroxyflavoneantineoplastic agent;
metabolite
luteolin3'-hydroxyflavonoid;
tetrahydroxyflavone
angiogenesis inhibitor;
anti-inflammatory agent;
antineoplastic agent;
apoptosis inducer;
c-Jun N-terminal kinase inhibitor;
EC 2.3.1.85 (fatty acid synthase) inhibitor;
immunomodulator;
nephroprotective agent;
plant metabolite;
radical scavenger;
vascular endothelial growth factor receptor antagonist
kaempferol7-hydroxyflavonol;
flavonols;
tetrahydroxyflavone
antibacterial agent;
geroprotector;
human blood serum metabolite;
human urinary metabolite;
human xenobiotic metabolite;
plant metabolite
agathisflavoneagathisflavone : A biflavonoid that is obtained by oxidative coupling of two molecules of apigenin resulting in a bond between positions C-6 and C-8 of the two chromene rings.

agathisflavone: bis-apigenin coupled at 6 and 8 positions; isolated from the plant Canarium manii; has hepatoprotective activity against carbon tetrachloride-induced hepatotoxicity
biaryl;
biflavonoid;
hydroxyflavone
antineoplastic agent;
antiviral agent;
hepatoprotective agent;
metabolite
azaleatinazaleatin : A monomethoxyflavone that is quercetin in which the hydroxy group at position 5 is replaced by a methoxy group.7-hydroxyflavonol;
monomethoxyflavone;
tetrahydroxyflavone
plant metabolite
cupressuflavonecupressuflavone : A biflavonoid that is obtained by oxidative coupling of two molecules of apigenin resulting in a bond between positions C-8 of the two chromene rings respectively. Isolated from Cupressus sempervirens and Juniperus occidentalis, it exhibits free radical scavenging and antielastase activities.

cupressuflavone: from Cupressus macrocarpa; structure in first source
biflavonoid;
hydroxyflavone;
ring assembly
EC 3.4.21.37 (leukocyte elastase) inhibitor;
metabolite;
radical scavenger
myricetin7-hydroxyflavonol;
hexahydroxyflavone
antineoplastic agent;
antioxidant;
cyclooxygenase 1 inhibitor;
food component;
geroprotector;
hypoglycemic agent;
plant metabolite
podocarpusflavone apodocarpusflavone A: isolated from Podocarpus imbricatusflavonoid oligomer
rubrolide arubrolide A: from Synoicum prunum; structure in first source