Page last updated: 2024-10-24

biosynthetic process

Definition

Target type: biologicalprocess

The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones. [GOC:curators, ISBN:0198547684]

Biosynthetic processes encompass a wide range of cellular activities that involve the creation of complex molecules from simpler precursors. These processes are essential for life, enabling organisms to build and maintain their structures, produce energy, and carry out various functions. Biosynthesis is fundamentally driven by anabolic reactions, where energy is used to create new chemical bonds. This energy is typically derived from catabolic processes, such as the breakdown of nutrients.

The intricate web of biosynthetic pathways is highly regulated and interconnected. These pathways are often compartmentalized within specific cellular organelles, ensuring efficiency and control. Enzymes, acting as biological catalysts, play pivotal roles in facilitating these intricate reactions, driving the conversion of substrates into products.

Biosynthesis can be broadly categorized into several key classes, each with its own unique set of processes and mechanisms. These categories include:

- **Nucleic acid biosynthesis:** This process involves the synthesis of DNA and RNA, the genetic blueprints of life. It begins with the production of nucleotide building blocks and culminates in the assembly of these blocks into long chains of DNA or RNA.

- **Protein biosynthesis:** Also known as translation, this process involves the creation of proteins based on the genetic code encoded within mRNA. The process occurs in ribosomes, where tRNA molecules deliver amino acids to the growing polypeptide chain, ultimately forming a functional protein.

- **Lipid biosynthesis:** This process is responsible for the production of fats, oils, and other lipid molecules. These molecules are crucial for energy storage, membrane structure, and various signaling pathways.

- **Carbohydrate biosynthesis:** This process involves the synthesis of sugars and complex carbohydrates from simpler molecules. Photosynthesis in plants is a prime example, where sunlight is used to convert carbon dioxide and water into glucose, a key energy source.

- **Secondary metabolite biosynthesis:** This category encompasses a diverse array of molecules that are not directly involved in essential cellular processes but often play vital roles in defense, communication, and environmental adaptation. These molecules include pigments, toxins, antibiotics, and hormones.

Biosynthetic processes are remarkably intricate and highly regulated, ensuring the precise assembly of molecules needed for life. These pathways are the foundation for cellular growth, development, and survival, highlighting their profound importance in the living world.'
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Proteins (3)

ProteinDefinitionTaxonomy
Kynurenine/alpha-aminoadipate aminotransferase, mitochondrialA kynurenine/alpha-aminoadipate aminotransferase, mitochondrial that is encoded in the genome of human. [PRO:DNx, UniProtKB:Q8N5Z0]Homo sapiens (human)
Kynurenine--oxoglutarate transaminase 3A kynurenine--oxoglutarate transaminase 3 that is encoded in the genome of human. [PRO:DNx, UniProtKB:Q6YP21]Homo sapiens (human)
Kynurenine--oxoglutarate transaminase 1A kynurenine--oxoglutarate transaminase 1 that is encoded in the genome of human. [PRO:DNx, UniProtKB:Q16773]Homo sapiens (human)

Compounds (5)

CompoundDefinitionClassesRoles
indolepropionic acid3-(1H-indol-3-yl)propanoic acid : An indol-3-yl carboxylic acid that is propionic acid substituted by a 1H-indol-3-yl group at position 3.

indolepropionic acid: structure in third source
indol-3-yl carboxylic acidauxin;
human metabolite;
plant metabolite
2,4-pyridinedicarboxylic acidlutidinic acid : A pyridinedicarboxylic acid carrying carboxy groups at positions 2 and 4.pyridinedicarboxylic acid
indole-3-lactic acid3-(indol-3-yl)lactic acid : A hydroxy monocarboxylic acid that is lactic acid substituted by a 1H-indol-3-yl group at position 3. It is a metabolite of tryptophan.

indole-3-lactic acid: RN given refers to cpd without isomeric designation
hydroxy monocarboxylic acid;
indol-3-yl carboxylic acid
human metabolite
oxalylglycineN-oxalylglycine : An amino dicarboxylic acid that is iminodiacetic acid with an oxo substituent. It is used as an inhibitor of alpha-ketoglutarate dependent (EC 1.14.11.*) enzymes.

oxalylglycine: structure given in first source
amino dicarboxylic acid;
N-acylglycine
EC 1.14.11.* (oxidoreductase acting on paired donors, 2-oxoglutarate as one donor, incorporating 1 atom each of oxygen into both donors) inhibitor
pf-04859989PF-04859989: a potent, brain-penetrant inhibitor of kynurenine aminotransferase II/KAT II with in vivo activity; structure in first source