Page last updated: 2024-10-24

regulation of platelet-derived growth factor receptor-beta signaling pathway

Definition

Target type: biologicalprocess

Any process that modulates the frequency, rate or extent of platelet-derived growth factor receptor-beta signaling pathway. [GOC:obol]

The platelet-derived growth factor receptor-beta (PDGFR-β) signaling pathway is a complex cascade that plays a crucial role in various cellular processes, including cell proliferation, migration, differentiation, and survival. The pathway is activated by the binding of platelet-derived growth factor (PDGF) to its receptor, PDGFR-β, a transmembrane tyrosine kinase receptor.

Upon PDGF binding, PDGFR-β dimerizes and undergoes autophosphorylation on specific tyrosine residues within its intracellular domain. These phosphorylated tyrosine residues serve as docking sites for various downstream signaling molecules, including adaptor proteins, kinases, and phosphatases.

The activation of PDGFR-β triggers a series of downstream signaling events, involving multiple intracellular pathways:

1. **RAS/MAPK Pathway:** Activated PDGFR-β recruits the adaptor protein GRB2, which in turn binds to SOS, a guanine nucleotide exchange factor (GEF). SOS activates the small GTPase RAS by promoting its exchange of GDP for GTP. Activated RAS further activates the MAPK (mitogen-activated protein kinase) cascade, ultimately leading to the phosphorylation and activation of transcription factors such as Elk-1 and c-Fos, which regulate gene expression.

2. **PI3K/AKT Pathway:** PDGFR-β also activates the phosphoinositide 3-kinase (PI3K) pathway. PI3K phosphorylates phosphatidylinositol (PIP2) to generate PIP3, a lipid second messenger that recruits and activates AKT (also known as protein kinase B). AKT phosphorylates and inhibits pro-apoptotic proteins like BAD, promoting cell survival, while also activating mTOR, a key regulator of protein synthesis and cell growth.

3. **PLCγ Pathway:** PDGFR-β can activate phospholipase C gamma (PLCγ), which hydrolyzes PIP2 to generate diacylglycerol (DAG) and inositol trisphosphate (IP3). DAG activates protein kinase C (PKC), while IP3 mobilizes calcium from intracellular stores, contributing to various cellular responses including cytoskeletal rearrangements and gene expression.

4. **JAK/STAT Pathway:** PDGFR-β can also activate the Janus kinase/signal transducer and activator of transcription (JAK/STAT) pathway. This pathway involves phosphorylation of STAT proteins by JAK kinases, leading to their dimerization and translocation to the nucleus, where they act as transcription factors.

The regulation of PDGFR-β signaling is crucial for maintaining normal cellular function and preventing uncontrolled cell growth. Dysregulation of this pathway is implicated in various diseases, including cancer, atherosclerosis, and fibrosis. The pathway is tightly controlled by a variety of mechanisms, including:

* **Negative feedback loops:** Activated PDGFR-β can trigger the recruitment of negative regulators like Sprouty and SHP2, which inhibit downstream signaling.
* **Protein phosphatases:** Phosphatases like SHP2 and PTEN dephosphorylate key signaling molecules, deactivating the pathway.
* **Ubiquitination and proteasomal degradation:** PDGFR-β can be ubiquitinated and degraded by the proteasome, limiting its activity.
* **Endocytosis:** PDGFR-β can be internalized and degraded via endocytosis, reducing its cell surface expression.

Understanding the intricate regulatory mechanisms of the PDGFR-β signaling pathway is essential for developing therapeutic strategies targeting this pathway for the treatment of various diseases.'
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Proteins (1)

ProteinDefinitionTaxonomy
Protein-lysine 6-oxidaseA protein-lysine 6-oxidase that is encoded in the genome of human. [PRO:DNx, UniProtKB:P28300]Homo sapiens (human)

Compounds (10)

CompoundDefinitionClassesRoles
pyrithionepyrithione : A pyridinethione that is pyridine-2(1H)-thione in which the hydrogen attached to the nitrogen is replaced by a hydroxy group. It is a Zn(2+) ionophore; the zinc salt is used as an antifungal and antibacterial agent.

pyrithione: split from cephalosporin molecule; some metal complexes of this have fumarate reductase inhibitory activity and may be useful against trypanosomes; RN given refers to parent cpd; structure
monohydroxypyridine;
pyridinethione
ionophore
aminopropionitrileAminopropionitrile: Reagent used as an intermediate in the manufacture of beta-alanine and pantothenic acid.aminopropionitrileantineoplastic agent;
antirheumatic drug;
collagen cross-linking inhibitor;
plant metabolite
disulfiramorganic disulfide;
organosulfur acaricide
angiogenesis inhibitor;
antineoplastic agent;
apoptosis inducer;
EC 1.2.1.3 [aldehyde dehydrogenase (NAD(+))] inhibitor;
EC 3.1.1.1 (carboxylesterase) inhibitor;
EC 3.1.1.8 (cholinesterase) inhibitor;
EC 5.99.1.2 (DNA topoisomerase) inhibitor;
ferroptosis inducer;
fungicide;
NF-kappaB inhibitor
thiramthiram : An organic disulfide that results from the formal oxidative dimerisation of N,N-dimethyldithiocarbamic acid. It is widely used as a fungicidal seed treatment.

Thiram: A dithiocarbamate chemical, used commercially in the rubber processing industry and as a fungicide. In vivo studies indicate that it inactivates the enzyme GLUTATHIONE REDUCTASE. It has mutagenic activity and may induce chromosomal aberrations.
organic disulfideantibacterial drug;
antifungal agrochemical;
antiseptic drug
1-deoxynojirimycin1-deoxy-nojirimycin: structure in first source

duvoglustat : An optically active form of 2-(hydroxymethyl)piperidine-3,4,5-triol having 2R,3R,4R,5S-configuration.
2-(hydroxymethyl)piperidine-3,4,5-triol;
piperidine alkaloid
anti-HIV agent;
anti-obesity agent;
bacterial metabolite;
EC 3.2.1.20 (alpha-glucosidase) inhibitor;
hepatoprotective agent;
hypoglycemic agent;
plant metabolite
miglustatmiglustat : A hydroxypiperidine that is deoxynojirimycin in which the amino hydrogen is replaced by a butyl group.

miglustat: a glucosylceramide synthase inhibitor
piperidines;
tertiary amino compound
anti-HIV agent;
EC 2.4.1.80 (ceramide glucosyltransferase) inhibitor
mor-14N-methyldeoxynojirimycin: glucosidase inhibitorhydroxypiperidine;
piperidine alkaloid;
tertiary amino compound
anti-HIV agent;
cardioprotective agent;
EC 3.2.1.20 (alpha-glucosidase) inhibitor;
plant metabolite
homonojirimycinhomonojirimycin: inhibits alpha-glucosidase; RN given for (2R-(2alpha,3alpha,4beta,5alpha,6beta))-isomer; structure in first source
n-nonyl-1-deoxynojirimycinN-nonyldeoxynojirimycin : A hydroxypiperidine that is deoxynojirimycin (duvoglustat) in which the amino hydrogen is replaced by a nonyl group.hydroxypiperidine;
tertiary amino compound
antiviral agent;
EC 3.2.1.20 (alpha-glucosidase) inhibitor;
EC 3.2.1.45 (glucosylceramidase) inhibitor
somatostatinheterodetic cyclic peptide;
peptide hormone