Page last updated: 2024-10-24

protein localization to endoplasmic reticulum

Definition

Target type: biologicalprocess

A process in which a protein is transported to, or maintained in, a location within the endoplasmic reticulum. [GOC:mah]

Protein localization to the endoplasmic reticulum (ER) is a crucial process in eukaryotic cells, ensuring the proper folding, modification, and trafficking of proteins destined for various cellular compartments. This process involves a complex interplay of signaling sequences, chaperones, and membrane-bound machinery.

**1. Signal Sequence Recognition:**
The journey begins with the synthesis of a protein destined for the ER. These proteins often contain a short amino acid sequence called a signal sequence, typically located at the N-terminus. This sequence acts as a "zip code," guiding the nascent polypeptide chain to the ER membrane.

**2. Signal Recognition Particle (SRP) Binding:**
As the signal sequence emerges from the ribosome, it is recognized by the signal recognition particle (SRP), a cytosolic ribonucleoprotein complex. SRP binds to the signal sequence and pauses translation, preventing the premature folding of the protein.

**3. Targeting to the ER:**
The SRP-ribosome complex then interacts with the SRP receptor on the ER membrane. This interaction triggers the release of SRP and initiates the translocation of the polypeptide chain across the ER membrane through a protein translocon.

**4. Translocation Through the Translocon:**
The translocon is a protein channel embedded in the ER membrane. The nascent polypeptide chain threads through the translocon, guided by the signal sequence. As the protein translocates, the signal sequence is cleaved by a signal peptidase, a protease residing in the ER lumen.

**5. Folding and Modification:**
Once inside the ER lumen, the protein folds into its correct three-dimensional structure with the assistance of chaperones, proteins that facilitate proper folding and prevent misfolding. The ER also provides a platform for post-translational modifications, such as glycosylation, disulfide bond formation, and protein disulfide isomerization.

**6. Sorting and Trafficking:**
After folding and modification, proteins are sorted and packaged into transport vesicles for delivery to their final destinations within the cell or for secretion outside the cell. This sorting process relies on specific signals or tags present on the protein.

**7. Quality Control:**
The ER maintains a stringent quality control system to ensure that only properly folded and functional proteins are exported from the ER. Misfolded or unassembled proteins are recognized by chaperones and targeted for degradation by the ubiquitin-proteasome system or the ER-associated degradation (ERAD) pathway.

In conclusion, protein localization to the ER is a tightly regulated process involving a series of steps that ensure the correct targeting, folding, modification, and trafficking of proteins to their final destinations within the cell. This intricate mechanism is essential for maintaining cellular homeostasis and performing various cellular functions.'
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Proteins (1)

ProteinDefinitionTaxonomy
Stimulator of interferon genes proteinA transmembrane protein 173 that is encoded in the genome of human. [PRO:DNx, UniProtKB:Q86WV6]Homo sapiens (human)

Compounds (6)

CompoundDefinitionClassesRoles
vadimezanvadimezan : A monocarboxylic acid that is acetic acid in which one of the methyl hydrogens is replaced by a 5,6-dimethyl-9-oxoxanthen-4-yl group.monocarboxylic acid;
xanthones
antineoplastic agent
mangostinalpha-mangostin : A member of the class of xanthones that is 9H-xanthene substituted by hydroxy group at positions 1, 3 and 6, a methoxy group at position 7, an oxo group at position 9 and prenyl groups at positions 2 and 8. Isolated from the stems of Cratoxylum cochinchinense, it exhibits antioxidant, antimicrobial and antitumour activities.

mangostin: xanthone from rind of Garcinia mangostana Linn. fruit
aromatic ether;
phenols;
xanthones
antimicrobial agent;
antineoplastic agent;
antioxidant;
plant metabolite
cyclic diadenosine phosphatecyclic di-AMP : A cyclic purine dinucleotide that is the 3',5'-cyclic dimer of AMP.adenyl ribonucleotide;
cyclic purine dinucleotide
Mycoplasma genitalium metabolite
bis(3',5')-cyclic diguanylic acidcyclic purine dinucleotide;
guanyl ribonucleotide
immunomodulator;
signalling molecule
cyclic guanosine monophosphate-adenosine monophosphatec-GMP-AMP : A cyclic purine dinucleotide that consists of AMP and GMP units cyclised via 3',5'-linkages.adenyl ribonucleotide;
cyclic purine dinucleotide;
guanyl ribonucleotide
cyclic guanosine monophosphate-adenosine monophosphate2'-3'-cGAMP : A cyclic purine dinucleotide that consists of AMP and GMP units cyclised via 3',5'- and 2',5'-linkages respectively.adenyl ribonucleotide;
cyclic purine dinucleotide;
guanyl ribonucleotide