Page last updated: 2024-10-24

maintenance of protein localization in endoplasmic reticulum

Definition

Target type: biologicalprocess

Any process in which a protein is maintained in the endoplasmic reticulum and prevented from moving elsewhere. These include sequestration within the endoplasmic reticulum, protein stabilization to prevent transport elsewhere and the active retrieval of proteins that escape the endoplasmic reticulum. [GOC:bf, GOC:vw]

The endoplasmic reticulum (ER) is a vast network of interconnected membranes that serves as the primary site for protein synthesis, folding, and modification in eukaryotic cells. Maintaining the proper localization of proteins within the ER is crucial for its function and the overall health of the cell. This intricate process involves a complex interplay of molecular machinery, including chaperones, folding enzymes, and protein translocation machinery.

**Protein Translocation:**
- Newly synthesized proteins destined for the ER contain a signal sequence, a short stretch of amino acids that directs them to the ER membrane.
- The signal sequence is recognized by the signal recognition particle (SRP), which binds to the ribosome and escorts the ribosome-nascent chain complex to the ER membrane.
- At the ER, the complex interacts with the translocon, a protein channel embedded in the ER membrane.
- The signal sequence is cleaved by signal peptidase, and the polypeptide chain is translocated into the ER lumen.

**Protein Folding and Quality Control:**
- Once inside the ER lumen, proteins fold into their correct three-dimensional structures with the assistance of chaperone proteins.
- Chaperones bind to unfolded or misfolded proteins, preventing aggregation and promoting proper folding.
- The ER contains a sophisticated quality control system that ensures only properly folded proteins are exported from the ER.
- Misfolded proteins are recognized by specific sensors, which activate the unfolded protein response (UPR).

**ER-Associated Degradation (ERAD):**
- Misfolded proteins that fail to refold are targeted for degradation through the ERAD pathway.
- ERAD involves a series of steps, including retrotranslocation of the misfolded protein back to the cytosol, ubiquitination, and proteasomal degradation.

**Retention Signals:**
- Some ER resident proteins contain specific retention signals that prevent their escape from the ER.
- These signals are recognized by proteins that anchor the resident proteins to the ER membrane or promote their re-entry into the ER.

**Examples of ER Retention Signals:**
- The KDEL sequence (Lys-Asp-Glu-Leu) is a common ER retention signal found at the C-terminus of many ER resident proteins.
- The HDEL sequence (His-Asp-Glu-Leu) is another ER retention signal that functions similarly to KDEL.

**Importance of Protein Localization in the ER:**
- The precise localization of proteins within the ER is essential for the efficient and accurate execution of its diverse functions.
- Disruption of protein localization can lead to protein aggregation, ER stress, and cell dysfunction.
- Maintaining proper protein localization in the ER is a dynamic and tightly regulated process that ensures the proper functioning of this vital organelle.'
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Proteins (1)

ProteinDefinitionTaxonomy
Endoplasmic reticulum chaperone BiPAn endoplasmic reticulum chaperone BiP that is encoded in the genome of human. [PRO:DAN]Homo sapiens (human)

Compounds (10)

CompoundDefinitionClassesRoles
dichlorophenDichlorophen: Nontoxic laxative vermicide effective for taenia infestation. It tends to produce colic and nausea. It is also used as a veterinary fungicide, anthelmintic, and antiprotozoan. (From Merck, 11th ed.)bridged diphenyl fungicide;
diarylmethane
hexachlorophenehexachlorophene : An organochlorine compound that is diphenylmethane in which each of the phenyl groups is substituted by chlorines at positions 2, 3, and 5, and by a hydroxy group at position 6. An antiseptic that is effective against Gram-positive organisms, it is used in soaps and creams for the treatment of various skin disorders. It is also used in agriculture as an acaricide and fungicide, but is not approved for such use within the European Union.

Hexachlorophene: A chlorinated bisphenol antiseptic with a bacteriostatic action against Gram-positive organisms, but much less effective against Gram-negative organisms. It is mainly used in soaps and creams and is an ingredient of various preparations used for skin disorders. (From Martindale, The Extra Pharmacopoeia, 30th ed, p797)
bridged diphenyl fungicide;
polyphenol;
trichlorobenzene
acaricide;
antibacterial agent;
antifungal agrochemical;
antiseptic drug
triclosanaromatic ether;
dichlorobenzene;
monochlorobenzenes;
phenols
antibacterial agent;
antimalarial;
drug allergen;
EC 1.3.1.9 [enoyl-[acyl-carrier-protein] reductase (NADH)] inhibitor;
EC 1.5.1.3 (dihydrofolate reductase) inhibitor;
fungicide;
persistent organic pollutant;
xenobiotic
adenosine diphosphateAdenosine Diphosphate: Adenosine 5'-(trihydrogen diphosphate). An adenine nucleotide containing two phosphate groups esterified to the sugar moiety at the 5'-position.adenosine 5'-phosphate;
purine ribonucleoside 5'-diphosphate
fundamental metabolite;
human metabolite
2,2'-methylenebis(ethyl-6-tert-butylphenol)
2,2'-methylenebis(4-methyl-6-tert-butylphenol)diarylmethane
oxyclozanideOxyclozanide: Anthelmintic used in grazing animals for fasciola and cestode infestations.
2,2'-bisphenol f2,2'-bisphenol F: contact allergen; structure given in first sourcediarylmethane
8-aminoadenosine
ver 155008VER 155008: structure in first sourcepurine nucleoside