Target type: biologicalprocess
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of nitrogen. [GOC:jl]
Cellular response to nitrogen starvation is a complex and tightly regulated process that allows organisms to survive and thrive in environments with limited nitrogen availability. This process involves a series of intricate molecular and cellular events, aimed at minimizing nitrogen loss, maximizing nitrogen uptake, and altering metabolism to utilize alternative nitrogen sources.
**1. Sensing Nitrogen Depletion:**
- Cells possess specialized sensor proteins that detect decreasing levels of nitrogen compounds, such as glutamine and ammonium. These sensors trigger signal transduction pathways, leading to the activation of transcription factors.
**2. Transcriptional Regulation:**
- Activated transcription factors bind to specific DNA sequences, upregulating the expression of genes involved in nitrogen uptake, assimilation, and recycling.
**3. Enhanced Nitrogen Uptake:**
- Cells increase the expression and activity of transporter proteins responsible for importing nitrogen-containing compounds from the environment. This includes high-affinity uptake systems for ammonium, nitrate, and even organic nitrogen sources like amino acids.
**4. Nitrogen Assimilation:**
- Once imported, inorganic nitrogen compounds are converted into usable forms. Ammonium is directly assimilated into amino acids. Nitrate is reduced to nitrite, then to ammonium, before being incorporated.
**5. Nitrogen Recycling:**
- Cells activate mechanisms to recycle existing nitrogen within the cell. This involves the breakdown of non-essential proteins and the mobilization of stored nitrogen-rich compounds.
**6. Metabolic Adjustments:**
- The cell's metabolism shifts to conserve nitrogen and utilize alternative sources. This includes:
- **Reduced protein synthesis:** Cells minimize the synthesis of new proteins to conserve nitrogen.
- **Increased autophagy:** The breakdown of cellular components (like organelles) provides a source of recycled nitrogen.
- **Utilization of alternative nitrogen sources:** Cells may switch to utilizing less preferred nitrogen sources, like urea or allantoin.
**7. Signaling and Communication:**
- Cells communicate with each other through signaling molecules, coordinating their responses to nitrogen starvation. This allows for the coordinated regulation of nitrogen uptake, metabolism, and growth within the organism.
**8. Recovery from Nitrogen Starvation:**
- Upon encountering favorable nitrogen conditions, cells downregulate the processes involved in nitrogen starvation response and resume normal growth and metabolism.
These intricate mechanisms ensure that organisms can survive and thrive in challenging environments, adapting to changes in nitrogen availability.'
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Protein | Definition | Taxonomy |
---|---|---|
Microtubule-associated proteins 1A/1B light chain 3B | A microtubule-associated proteins 1A/1B light chain 3B that is encoded in the genome of human. [PRO:DNx, UniProtKB:Q9GZQ8] | Homo sapiens (human) |
Microtubule-associated proteins 1A/1B light chain 3A | A microtubule-associated proteins 1A/1B light chain 3A that is encoded in the genome of human. [PRO:DNx, UniProtKB:Q9H492] | Homo sapiens (human) |
Ubiquitin-like modifier-activating enzyme ATG7 | A ubiquitin-like modifier-activating enzyme ATG7 that is encoded in the genome of human. [PRO:DNx, UniProtKB:O95352] | Homo sapiens (human) |
Compound | Definition | Classes | Roles |
---|---|---|---|
pevonedistat | pevonedistat : A pyrrolopyrimidine that is 7H-pyrrolo[2,3-d]pyrimidine which is substituted by a (1S)-2,3-dihydro-1H-inden-1-ylnitrilo group at position 4 and by a (1S,3S,4S)-3-hydroxy-4-[(sulfamoyloxy)methyl]cyclopentyl group at position 7. It is a potent and selective NEDD8-activating enzyme inhibitor with an IC50 of 4.7 nM, and currently under clinical investigation for the treatment of acute myeloid leukemia (AML) and myelodysplastic syndromes. pevonedistat: a potent and selective inhibitor of NAE (NEDD8-activating enzyme) | cyclopentanols; indanes; pyrrolopyrimidine; secondary amino compound; sulfamidate | antineoplastic agent; apoptosis inducer |
novobiocin | novobiocin : A coumarin-derived antibiotic obtained from Streptomyces niveus. Novobiocin: An antibiotic compound derived from Streptomyces niveus. It has a chemical structure similar to coumarin. Novobiocin binds to DNA gyrase, and blocks adenosine triphosphatase (ATPase) activity. (From Reynolds, Martindale The Extra Pharmacopoeia, 30th ed, p189) | carbamate ester; ether; hexoside; hydroxycoumarin; monocarboxylic acid amide; monosaccharide derivative; phenols | antibacterial agent; antimicrobial agent; EC 5.99.1.3 [DNA topoisomerase (ATP-hydrolysing)] inhibitor; Escherichia coli metabolite; hepatoprotective agent |
dihydronovobiocin | dihydronovobiocin: high affinity for DNA gyrase B; structure given |