Page last updated: 2024-09-02

octopine and arginine

octopine has been researched along with arginine in 156 studies

Compound Research Comparison

Studies (octopine)	Trials (octopine)	Recent Studies (post-2010) (octopine)	Studies (arginine)	Trials (arginine)	Recent Studies (post-2010) (arginine)
160	0	17	46,388	1,688	11,176

Protein Interaction Comparison

Protein	Taxonomy	octopine (IC50)	arginine (IC50)
Cationic amino acid transporter 3	Homo sapiens (human)		283

Research

Studies (156)

Timeframe	Studies, this research(%)	All Research%
pre-1990	85 (54.49)	18.7374
1990's	40 (25.64)	18.2507
2000's	14 (8.97)	29.6817
2010's	13 (8.33)	24.3611
2020's	4 (2.56)	2.80

Authors

Authors	Studies
Hack, E; Kemp, JD	1
Storey, JM; Storey, KB	1
Albert, MJ; Callis, J; Gurley, WB; Kemp, JD; Sutton, DW	1
Klapwijk, PM; Scheulderman, T; Schilperoort, RA	1
Gordon, MP; Montoya, AL; Moore, LW; Nester, EW	1
Chilton, MD; Gordon, MP; Montoya, AL; Nester, EW; Sciaky, D	1
Fields, JH; Hartline, PH; Hochachka, PW	1
Chilton, MD; Farrand, SK; Levin, R; Nester, EW	1
Kemp, JD	1
Donkersloot, JA; Thompson, J	1
Hodges, L; Ream, W; Shurvinton, CE	1
Valdivia, RH; Wang, L; Winans, SC	1
Schröder, J; von Lintig, J; Zanker, H	1
Bonnard, G; Canaday, J; Kares, C; Otten, L; Paulus, F; Vincent, F	1
Kanno, N; Nagahisa, E; Sato, M; Sato, Y; Takeuchi, M	1
Burgner, JW; Chilton, WS; Gelvin, SB; Krishnan, M	1
Kerr, A; Zhang, LH	1
den Dulk-Ras, A; Hooykaas, PJ; Maroney, MJ; Melchers, LS; Schilperoort, RA; Thompson, DV; van Vuuren, HA	1
Pörtner, HO	1
Kado, CI; Morel, P; Shirasu, K	1
Kado, CI; Lin, TS; Steck, TR	1
De Vos, G; Kuldau, GA; McCaffrey, G; Owen, J; Zambryski, P	1
Bell, CR	1
Gäde, G; Meinardus-Hager, G	1
Sans, N; Schindler, U; Schröder, J	1
Iino, T; Suzuki, Y	1
Gelvin, SB; Gould, JH; Krishnan, M; Smith, RH; Veluthambi, K	1
Kado, CI; Morel, P; Powell, BS; Rogowsky, PM	1
Demarez, M; Dessaux, Y; Farrand, SK; Guyon, P; Legrain, C; Petit, A; Tate, ME; Tempé, J	1
Kado, CI; Tait, RC	1
An, G; Flores, C; Nester, EW; Stachel, SE	1
Hooykaas, PJ; Idler, KB; Melchers, LS; Schilperoort, RA; Thompson, DV	1
Dessaux, Y; Farrand, SK; Tempé, J	1
Ashby, AM; Brown, A; Loake, GJ; Royal, C; Shaw, CH	1
Machida, C; Machida, Y; Niwa, Y; Takebe, I; Yamamoto, A	1
Fraley, RT; Horsch, RB; Klee, HJ; Nester, EW; Rogers, SG; Stachel, S; Winans, SC	1
Davey, MR; Gartland, KM; Mulligan, BJ	1
Christou, P; Platt, SG; Yang, NS	1
Amesz, PA; de Kam, RJ; de Pater, BS; Hoge, JH; Klinkhamer, MP; Memelink, J; Schilperoort, RA	1
de Kam, RJ; de Pater, BS; Hoge, JH; Schilperoort, RA	1
Dessaux, Y; Farrand, SK	1
Nester, EW; Yanofsky, MF	1
Chilton, MD; Fraley, RT; Helmer, GL; Hood, EE	1
Ursic, D	1
Beljanski, M; Le Goff, L	1
Gordon, MP; Kwok, WW; Nester, EW	1
Bytebier, B; De Greve, H; Deblaere, R; Deboeck, F; Leemans, J; Schell, J; Van Montagu, M	1
Firmin, JL; Stewart, IM; Wilson, KE	1
den Dulk-Ras, H; Hofker, M; Hooykaas, PJ; Schilperoort, RA	1
Knauf, V; Montoya, A; Nester, E; Yanofsky, M	1
Ikeda, JE; Kiyokawa, S; Machida, Y; Sakurai, M; Suzuki, Y; Ubasawa, A	1
De Block, M; Depicker, A; Dhaese, P; Engler, G; Genetello, C; Holsters, M; Inzé, D; Silva, B; Van Vliet, F; Villarroel, R	1
Hooykaas, PJ; Koekman, BP; Schilperoort, RA	2
De Beuckeleer, M; Depicker, A; Engler, G; Hernalsteens, JP; Holsters, M; Lemmers, M; Schell, J; Van Montagu, M; Willmitzer, L; Zambryski, P	1
Nester, EW; White, FF	1
Klapwijk, PM; Ooms, G; Poulis, JA; Schilperoort, RA	1
Garfinkel, DJ; Nester, EW	1
Knauf, VC; Nester, EW; Thomashow, MF	1
Hille, J; Schilperoort, R	1
Gelvin, SB; Gordon, MP; McPherson, JC; Nester, EW; Thomashow, MF	1
Garfinkel, DJ; Gordon, MP; Nester, EW; Ream, LW; Simpson, RB; White, FF	1
Depicker, A; Engler, G; Maenhaut, R; Schell, J; Van Montagu, M; Villarroel, R	1
Hille, J; Klasen, I; Schilperoort, R	1
Hooykaas, PJ; Ooms, G; Regensburg-Tuïnk, TJ; Schilperoort, RA; Van Beelen, P; Van Veen, RJ	1
Bakker, A; Gordon, MP; Molendijk, L; Nester, EW; Ooms, G; Schilperoort, RA; Wullems, GJ	1
Knauf, VC; Nester, EW	1
Bevan, MW; Chilton, MD	1
Dhaese, P; Schell, J; Schmalenbach, W; Schreier, PH; Van Montagu, M; Willmitzer, L	1
Byrne, MC; Chilton, MD; Lahners, K	1
Flores, C; Fuller, S; Garfinkel, D; Gordon, M; Klee, H; Lichtenstein, C; Montoya, A; Nester, E	1
Hille, J; Schilperoort, R; van Kan, J	1
di Mauro, E; Risuelo, G	1
Lurquin, PF; Manzara, T; Muller, A	1
Gill, TA; Langille, SM	1
Maille, M	1
Hoekema, A; Hooykaas, PJ; Schilperoort, RA	1
Schrimsher, JL; Taylor, KB	1
Ellis, JG; Guyon, P; Kerr, A; Petit, A; Tate, ME; Tempé, J	1
Kosuge, T; Nester, EW	1
De Greve, H; Deblaere, R; Hernalsteens, JP; Leemans, J; Maes, M; Schell, J; Shaw, C; Van Montagu, M	1
Prakash, RK; Schilperoort, RA	1
De Greve, H; Dhaese, P; Lemmers, M; Schell, J; Seurinck, J; Van Montagu, M	1
Robin, Y	4
Baguet, F; Devroede, J	1
Molendijk, L; Ooms, G; Schilperoort, RA; Wullems, GJ	1
Aronson, AI; Gelvin, SB; Gordon, MP; Nester, EW	1
Klapwijk, PM; Korevaar, K; Ooms, G; Schilperoort, RA; van Breukelen, J	1
Farrand, SK; Hamada, SE	1
den Dulk-Ras, H; Hooykaas, PJ; Ooms, G; Schilperoort, RA	1
Costantino, P; den Dulk-Ras, H; Hooykaas, PJ; Schilperoort, RA	1
Wang, L; Winans, SC	2
Boulton, MI; Gordon, MP; Hawes, M; Jin, S; Nester, EW; Pan, SQ	1
Bélanger, C; Dion, P; Mohammadi, M; Xu, D	1
Krul, WR; Lacorte, C; Mansur, E	1
Kalogeraki, VS; Winans, SC	2
Burbea, M; Fuqua, C; Winans, SC	1
Kreusch, D; Langridge, P; Langridge, U; Lurz, G; Schröder, J; Zanker, H	1
de Ruffray, P; Otten, L; van Nuenen, M	1
Cho, K; Winans, SC	1
Kreusch, D; Schröder, J; von Lintig, J	2
Boulton, MI; Davies, JW; Nester, EW; Raineri, DM	1
Cho, K; Fuqua, C; Martin, BS; Winans, SC	1
Alt-Mörbe, J; Farrand, SK; Fuqua, C; Li, PL; Stryker, JL; Winans, SC	1
Fuqua, C; Winans, SC	1
Kanno, N; Kobatake, Y; Nagahisa, E; Nakano, T; Sato, M; Sato, Y; Takeuchi, M	1
Finke, E; Lee, PG; Pörtner, HO	1
Cho, K; Fuqua, C; Winans, SC	1
Cook, DM; Farrand, SK; Li, PL; Padden, S; Ruchaud, F	1
Bacon, JP; Baines, RA; Midgley, JM; Watson, DG	1
Hattori, Y; Kato, A; Ohta, N; Suzuki, K; Uraji, M; Yoshida, K	1
Kado, CI; Palumbo, JD; Phillips, DA	1
Bachmann, BO; Li, R; Townsend, CA	1
Jafri, S; Lyi, SM; Winans, SC	1
Cane, DE	1
Kalogeraki, VS; Stryker, JL; Winans, SC; Zhu, J	1
Boutilier, RG; Mesa, KA; Pogson, GH; Webber, DM; Wells, J; Wells, MJ; West, TG	1
Beijersbergen, A; Hooykaas, PJ; Idler, KB; Melchers, LS; Schrammeijer, B; Thompson, DV	1
Bachmann, BO; Townsend, CA	1
Enomoto, T; Nakao, C; Ohyama, H	1
Balaji, V; Krishnamohan, A; Veluthambi, K	1
Akakura, R; Winans, SC	2
Hewitson, KS; MacKinnon, CH; Schofield, CJ; Sleeman, MC	1
De Greve, H; Dhaese, P; Gielen, J; Schell, J; Seurinck, L; Van Montagu, M	1
Dessaux, Y; Mansouri, H; Oger, P; Petit, A	1
Ayre, BG; Keller, F; Turgeon, R	1
HUMOTO, Y	1
ROBIN, Y; THOAI, NV	1
Angert, ER; Brencic, A; Winans, SC	1
Hadley, RG; Szalay, AA; Yun, AC	1
Aguilar, J; Hackworth, CA; Ward, D; Zambryski, P; Zupan, J	1
HERBST, RM; SWART, EA	1
Chen, CS; Tsai, CS; Winans, SC	1
Eberhard, A; Flores-Mireles, AL; Winans, SC	1
Grieshaber, MK; Schmitt, L; Smits, SH; van Os, N	1
Bever, JD; Fuqua, C; Platt, TG	1
Boavida-Portugal, J; Diniz, M; Pimentel, MS; Rosa, R; Teixeira, T; Trübenbach, K	1
Beury-Cirou, A; Dessaux, Y; Faure, D; Lenglet, A; Libanga, C; Mondy, S; Ratet, P	1
Fukumori, F; Sueda, R; Watanabe, S; Watanabe, Y	1
Citovsky, V; Lacroix, B	1
Ahn, DH; Han, SR; Oh, TJ; Park, H; Yu, SC	1
Aumont-Nicaise, M; Dessaux, Y; El Sahili, A; Faure, D; Kwasiborski, A; Lang, J; Moréra, S; Shykoff, JA; Vigouroux, A	1
Aumont-Nicaise, M; Dessaux, Y; El Sahili, A; Faure, D; Lang, J; Moréra, S; Vigouroux, A	1
Chhor, G; Jedrzejczak, R; Joachimiak, A; Kim, Y; Tsai, CS; Winans, JB; Winans, SC	1
Chen, W; Etchison, E; Foulk, S; Gupta, M; Sardesai, N; Wu, H	1
Achbani, EH; Benbouazza, A; Benkirane, R; Chapulliot, D; Duplay, Q; Habbadi, K; Kerzaon, I; Lavire, C; Vial, L; Wisniewski-Dyé, F	1
Hakimelahi, A; Kassaee, SM; Mahmoodi, M; Sharifi, R	1
Bellvert, F; Chapulliot, D; Dessaux, Y; Gaillard, V; Kerzaon, I; Lavire, C; Le, TN; Nesme, X; Padilla, R; Vial, L	1
Hooykaas, MJG; Hooykaas, PJJ; Shao, S	1

Reviews

4 review(s) available for octopine and arginine

Article	Year
Biosynthesis and distribution of N-carboxyalkyl amino acids (opines) in bacteria. Research in microbiology, 1992, Volume: 143, Issue:2 Topics: Amino Acids; Arginine; Arthrobacter; Bacteria; In Vitro Techniques; Lactococcus lactis; Rhizobium	1992
Transformation of the genomic expression of plant cells. Symposia of the Society for Experimental Biology, 1986, Volume: 40 Topics: Arginine; DNA, Bacterial; Plant Tumors; Plants; Plasmids; Regeneration; Rhizobium; Transformation, Genetic	1986
T-DNA of the Agrobacterium Ti and Ri plasmids. Annual review of genetics, 1982, Volume: 16 Topics: Arginine; Conjugation, Genetic; DNA Restriction Enzymes; DNA, Bacterial; Nucleic Acid Hybridization; Plant Tumors; Plasmids; Rhizobium; Transcription, Genetic	1982
Plasmids specifying plant hyperplasias. Annual review of microbiology, 1981, Volume: 35 Topics: Arginine; Bacteriophages; Base Sequence; Genes, Bacterial; Indoleacetic Acids; Oxazines; Plant Tumors; Plasmids; Pseudomonas; Recombination, Genetic; Rhizobium; Transcription, Genetic	1981

Other Studies

152 other study(ies) available for octopine and arginine

Article	Year
Comparison of octopine, histopine, lysopine, and octopinic acid synthesizing activities in sunflower crown gall tissues. Biochemical and biophysical research communications, 1977, Sep-23, Volume: 78, Issue:2 Topics: Amino Acids; Arginine; Histidine; Lysine; NAD; NADP; Ornithine; Plant Diseases; Pyruvates; Rhizobium	1977
Kinetic characterization of tissue-specific isozymes of octopine dehydrogenase from mantle muscle and brain of Sepia officinalis. Functional similarities to the M4 and H4 isozymes of lactate dehydrogenase. European journal of biochemistry, 1979, Feb-01, Volume: 93, Issue:3 Topics: Amino Acid Oxidoreductases; Animals; Arginine; Brain; Isoenzymes; Kinetics; L-Lactate Dehydrogenase; Mollusca; Muscles; NAD; Pyruvates	1979
Transcription of Ti plasmid-derived sequences in three octopine-type crown gall tumor lines. Proceedings of the National Academy of Sciences of the United States of America, 1979, Volume: 76, Issue:6 Topics: Arginine; DNA Restriction Enzymes; DNA, Recombinant; Escherichia coli; Nucleic Acid Hybridization; Plant Tumors; Plants; Plasmids; Rhizobium; RNA; Transcription, Genetic	1979
Coordinated regulation of octopine degradation and conjugative transfer of Ti plasmids in Agrobacterium tumefaciens: evidence for a common regulatory gene and separate operons. Journal of bacteriology, 1978, Volume: 136, Issue:2 Topics: Arginine; Conjugation, Genetic; DNA, Bacterial; Genes, Regulator; Mutation; Operon; Plasmids; Rhizobium	1978
Multiple genes coding for octopine-degrading enzymes in Agrobacterium. Journal of bacteriology, 1978, Volume: 136, Issue:3 Topics: Arginine; Chromosomes, Bacterial; Genes; Glutarates; Mutation; Plasmids; Rhizobium	1978
Octopine and nopaline metabolism in Agrobacterium tumefaciens and crown gall tumor cells: role of plasmid genes. Journal of bacteriology, 1977, Volume: 129, Issue:1 Topics: Arginine; Conjugation, Genetic; Extrachromosomal Inheritance; Genes; Glutarates; Oxidoreductases Acting on CH-NH Group Donors; Plant Tumors; Plasmids; Rhizobium; Transformation, Genetic	1977
Octopine as an end product of anaerobic glycolysis in the chambered nautilus. Science (New York, N.Y.), 1977, Jan-07, Volume: 195, Issue:4273 Topics: Anaerobiosis; Animals; Arginine; Glucosephosphate Dehydrogenase; Glycolysis; Isoenzymes; Kinetics; Mollusca; Muscles; Oxidoreductases Acting on CH-NH Group Donors	1977
RP4 promotion of transfer of a large Agrobacterium plasmid which confers virulence. Genetics, 1976, Volume: 83, Issue:4 Topics: Arginine; Conjugation, Genetic; Drug Resistance, Microbial; Extrachromosomal Inheritance; Genes; Genetic Linkage; Plant Tumors; Plasmids; Rhizobium; Virulence	1976
Octopine as a marker for the induction of tumorous growth by agrobacterium tumefaciens strain B6. Biochemical and biophysical research communications, 1976, Apr-05, Volume: 69, Issue:3 Topics: Arginine; Plant Tumors; Plants; Rhizobium; Species Specificity	1976
A nuclear localization signal and the C-terminal omega sequence in the Agrobacterium tumefaciens VirD2 endonuclease are important for tumor formation. Proceedings of the National Academy of Sciences of the United States of America, 1992, Dec-15, Volume: 89, Issue:24 Topics: Agrobacterium tumefaciens; Amino Acid Sequence; Arginine; Cell Compartmentation; Cell Nucleus; DNA Mutational Analysis; Molecular Sequence Data; Mutagenesis, Site-Directed; Plant Diseases; Plasmids; Sequence Alignment; Sequence Deletion	1992
Characterization of a putative periplasmic transport system for octopine accumulation encoded by Agrobacterium tumefaciens Ti plasmid pTiA6. Journal of bacteriology, 1991, Volume: 173, Issue:20 Topics: Agrobacterium tumefaciens; Amino Acid Sequence; Amino Acid Transport Systems, Basic; Arginine; ATP-Binding Cassette Transporters; Bacterial Proteins; Base Sequence; Biological Transport, Active; DNA Transposable Elements; Electrophoresis, Polyacrylamide Gel; Escherichia coli; Lac Operon; Membrane Transport Proteins; Molecular Sequence Data; Mutagenesis, Site-Directed; Open Reading Frames; Operon; Plasmids; Promoter Regions, Genetic; Recombinant Fusion Proteins	1991
Opine transport genes in the octopine (occ) and nopaline (noc) catabolic regions in Ti plasmids of Agrobacterium tumefaciens. Journal of bacteriology, 1992, Volume: 174, Issue:3 Topics: Agrobacterium tumefaciens; Amino Acid Sequence; Amino Acids; Arginine; Base Sequence; Biological Transport, Active; Carrier Proteins; Chromosome Mapping; DNA Mutational Analysis; Molecular Sequence Data; Nucleic Acid Conformation; Plasmids; Reading Frames; Regulatory Sequences, Nucleic Acid; Sequence Homology, Nucleic Acid; Transcription, Genetic	1992
Sequence of the iaa and ipt region of different Agrobacterium tumefaciens biotype III octopine strains: reconstruction of octopine Ti plasmid evolution. Plant molecular biology, 1991, Volume: 16, Issue:4 Topics: Amino Acid Sequence; Arginine; Base Sequence; Biological Evolution; Escherichia coli; Genes, Bacterial; Genotype; Molecular Sequence Data; Open Reading Frames; Plasmids; Restriction Mapping; Rhizobium; Sequence Homology, Nucleic Acid	1991
Determination of octopine by pre-column fluorescence derivatization using benzoin. Biochemistry international, 1991, Volume: 23, Issue:6 Topics: Animals; Arginine; Benzoin; Chromatography, High Pressure Liquid; Fluorometry; Mollusca	1991
Transport of nonmetabolizable opines by Agrobacterium tumefaciens. Journal of bacteriology, 1991, Volume: 173, Issue:2 Topics: Arginine; Biological Transport; Carbon Radioisotopes; Kinetics; Radioisotope Dilution Technique; Rhizobium	1991
A diffusible compound can enhance conjugal transfer of the Ti plasmid in Agrobacterium tumefaciens. Journal of bacteriology, 1991, Volume: 173, Issue:6 Topics: Arginine; Conjugation, Genetic; Diffusion; Imino Acids; Plasmids; Rhizobium; Temperature	1991
Octopine and nopaline strains of Agrobacterium tumefaciens differ in virulence; molecular characterization of the virF locus. Plant molecular biology, 1990, Volume: 14, Issue:2 Topics: Amino Acid Sequence; Arginine; Bacterial Proteins; Base Sequence; DNA, Bacterial; Genes, Bacterial; Kinetics; Molecular Sequence Data; Nicotiana; Plant Tumors; Plants, Toxic; Plasmids; Protein Conformation; Restriction Mapping; Rhizobium; Transcription, Genetic; Virulence; Virulence Factors	1990
Determination of intracellular buffer values after metabolic inhibition by fluoride and nitrilotriacetic acid. Respiration physiology, 1990, Volume: 81, Issue:2 Topics: Adenosine Diphosphate; Adenosine Monophosphate; Adenosine Triphosphate; Animals; Arginine; Bufonidae; Carbon Dioxide; Decapodiformes; Fluorides; Glycerophosphates; Hydrogen-Ion Concentration; Intracellular Fluid; Nitrilotriacetic Acid; Organophosphorus Compounds; Oxygen Consumption; Phosphates; Potassium; Potassium Compounds	1990
Characterization of the virB operon of an Agrobacterium tumefaciens Ti plasmid: nucleotide sequence and protein analysis. Molecular microbiology, 1990, Volume: 4, Issue:7 Topics: Adenosine Triphosphate; Amino Acid Sequence; Arginine; Bacterial Proteins; Base Sequence; Binding Sites; Gene Expression Regulation, Bacterial; Molecular Sequence Data; Operon; Plasmids; Rhizobium; Sequence Homology, Nucleic Acid; Virulence Factors	1990
VirD2 gene product from the nopaline plasmid pTiC58 has at least two activities required for virulence. Nucleic acids research, 1990, Dec-11, Volume: 18, Issue:23 Topics: Amino Acid Sequence; Arginine; Bacterial Proteins; Base Sequence; Blotting, Southern; DNA, Bacterial; Genes; Genetic Complementation Test; Molecular Sequence Data; Mutagenesis, Insertional; Open Reading Frames; Plants; Plasmids; Rhizobium; Sequence Homology, Nucleic Acid; Virulence Factors	1990
The virB operon of Agrobacterium tumefaciens pTiC58 encodes 11 open reading frames. Molecular & general genetics : MGG, 1990, Volume: 221, Issue:2 Topics: Amino Acid Sequence; Arginine; Bacterial Proteins; Base Sequence; Electrophoresis, Polyacrylamide Gel; Molecular Sequence Data; Operon; Plasmids; Protein Biosynthesis; Restriction Mapping; Rhizobium; Virulence Factors	1990
Growth of Agrobacterium tumefaciens under octopine limitation in chemostats. Applied and environmental microbiology, 1990, Volume: 56, Issue:6 Topics: Arginine; Binding, Competitive; Glutamates; Kinetics; Rhizobium; Substrate Specificity	1990
The pyruvate branchpoint in the anaerobic energy metabolism of the jumping cockle Cardium tuberculatum L.: D-lactate formation during environmental anaerobiosis versus octopine formation during exercise. Experimental biology, 1986, Volume: 45, Issue:2 Topics: Alanine; Anaerobiosis; Animals; Arginine; Aspartic Acid; Energy Metabolism; Fatty Acids, Volatile; Glycolysis; Hypoxia; Lactates; Mollusca; Physical Exertion; Pyruvates; Sarcosine	1986
Ornithine cyclodeaminase from octopine Ti plasmid Ach5: identification, DNA sequence, enzyme properties, and comparison with gene and enzyme from nopaline Ti plasmid C58. Journal of bacteriology, 1989, Volume: 171, Issue:2 Topics: Amino Acid Sequence; Ammonia-Lyases; Arginine; Base Sequence; Escherichia coli; Genes; Genes, Bacterial; Molecular Sequence Data; Plasmids; Restriction Mapping	1989
Ars region TL-DNA on octopine type Ti plasmids. Molecular & general genetics : MGG, 1989, Volume: 218, Issue:2 Topics: Arginine; Base Sequence; DNA Replication; DNA, Bacterial; Escherichia coli; Molecular Sequence Data; Phenotype; Plasmids; Restriction Mapping; Rhizobium; Saccharomyces cerevisiae; Transformation, Genetic	1989
Opines stimulate induction of the vir genes of the Agrobacterium tumefaciens Ti plasmid. Journal of bacteriology, 1989, Volume: 171, Issue:7 Topics: Acetophenones; Amino Acids; Arginine; DNA, Bacterial; Gene Expression Regulation; Genes, Bacterial; Gossypium; Plasmids; Rhizobium; Transcriptional Activation; Transformation, Genetic	1989
Characterization of the virA virulence gene of the nopaline plasmid, pTiC58, of Agrobacterium tumefaciens. Molecular microbiology, 1989, Volume: 3, Issue:9 Topics: Amino Acid Sequence; Arginine; Bacterial Proteins; Base Sequence; Molecular Sequence Data; Plasmids; Promoter Regions, Genetic; Restriction Mapping; Rhizobium; Sequence Homology, Nucleic Acid; Virulence	1989
Opine utilization by Agrobacterium spp.: octopine-type Ti plasmids encode two pathways for mannopinic acid degradation. Journal of bacteriology, 1988, Volume: 170, Issue:7 Topics: Arginine; Biological Transport; Chemical Phenomena; Chemistry; DNA Restriction Enzymes; Mannitol; Mutation; Oxazines; Oxygen Consumption; Plasmids; Rhizobium	1988
Regulation of the virC and virD promoters of pTiC58 by the ros chromosomal mutation of Agrobacterium tumefaciens. Molecular microbiology, 1988, Volume: 2, Issue:3 Topics: Acetophenones; Acetyltransferases; Arginine; Base Sequence; Chloramphenicol O-Acetyltransferase; Cloning, Molecular; DNA-Directed RNA Polymerases; DNA, Bacterial; Endonucleases; Enzyme Induction; Gene Expression Regulation; Molecular Sequence Data; Mutation; Plasmids; Promoter Regions, Genetic; Recombinant Fusion Proteins; Rhizobium; Single-Strand Specific DNA and RNA Endonucleases; Transcription, Genetic; Transformation, Genetic	1988
A Tn3 lacZ transposon for the random generation of beta-galactosidase gene fusions: application to the analysis of gene expression in Agrobacterium. The EMBO journal, 1985, Volume: 4, Issue:4 Topics: Amino Acid Sequence; Arginine; Base Sequence; beta-Galactosidase; DNA Restriction Enzymes; DNA Transposable Elements; Enzyme Induction; Galactosidases; Genes; Genes, Bacterial; Kinetics; Lac Operon; Protein Biosynthesis; Rhizobium; Transcription, Genetic	1985
Nucleotide sequence of the virulence gene virG of the Agrobacterium tumefaciens octopine Ti plasmid: significant homology between virG and the regulatory genes ompR, phoB and dye of E. coli. Nucleic acids research, 1986, Dec-22, Volume: 14, Issue:24 Topics: Amino Acid Sequence; Arginine; Bacterial Proteins; Base Sequence; DNA Restriction Enzymes; Escherichia coli; Genes; Genes, Bacterial; Genes, Regulator; Plasmids; Rhizobium; Virulence	1986
Genetic analysis of mannityl opine catabolism in octopine-type Agrobacterium tumefaciens strain 15955. Molecular & general genetics : MGG, 1987, Volume: 208, Issue:1-2 Topics: Arginine; Cloning, Molecular; Cosmids; Gene Expression Regulation; Genes, Bacterial; Lactones; Mannitol; Oxazines; Plasmids; Rhizobium; Species Specificity	1987
virA and virG are the Ti-plasmid functions required for chemotaxis of Agrobacterium tumefaciens towards acetosyringone. Molecular microbiology, 1988, Volume: 2, Issue:3 Topics: Acetophenones; Arginine; Bacterial Proteins; Chemotactic Factors; Chemotaxis; Chromosome Mapping; Cloning, Molecular; Cosmids; Gene Expression Regulation; Membrane Proteins; Methyl-Accepting Chemotaxis Proteins; Mutation; Plasmids; Rhizobium; Transfection	1988
Right-hand border regions of octopine T-DNA are recognized by RNA polymerase of Agrobacterium as well as by VirD1 and VirD2 proteins. Nucleic acids research, 1988, Aug-11, Volume: 16, Issue:15 Topics: Arginine; Bacterial Proteins; Base Sequence; Binding, Competitive; Cloning, Molecular; DNA-Binding Proteins; DNA-Directed RNA Polymerases; Gene Expression Regulation; Molecular Sequence Data; Plasmids; Promoter Regions, Genetic; Regulatory Sequences, Nucleic Acid; Rhizobium; RNA Processing, Post-Transcriptional; Transcription, Genetic	1988
Analysis of Agrobacterium tumefaciens virulence mutants in leaf discs. Proceedings of the National Academy of Sciences of the United States of America, 1986, Volume: 83, Issue:8 Topics: Arginine; Cells, Cultured; Mutation; Plasmids; Rhizobium; Transformation, Genetic	1986
Detection of opines by colorimetric assay. Analytical biochemistry, 1987, Feb-01, Volume: 160, Issue:2 Topics: Arginine; Cell Transformation, Neoplastic; Colorimetry; Nicotiana; Plant Tumors; Plants, Toxic	1987
Plant expression signals of the Agrobacterium T-cyt gene. Nucleic acids research, 1987, Oct-26, Volume: 15, Issue:20 Topics: Arginine; Base Sequence; Chromosome Deletion; Cytokinins; Genes; Genes, Bacterial; Molecular Sequence Data; Mutation; Plant Growth Regulators; Plants; Promoter Regions, Genetic; Rhizobium; Transcription, Genetic	1987
Effects of mutations in the TATA box region of the Agrobacterium T-cyt gene on its transcription in plant tissues. Nucleic acids research, 1987, Oct-26, Volume: 15, Issue:20 Topics: Arginine; Base Sequence; Cytokinins; Genes; Genes, Bacterial; Molecular Sequence Data; Mutation; Plant Growth Regulators; Plants; Promoter Regions, Genetic; Rhizobium; Species Specificity; Transcription, Genetic	1987
Proline biosynthesis encoded by the noc and occ loci of Agrobacterium Ti plasmids. Journal of bacteriology, 1986, Volume: 167, Issue:2 Topics: Arginine; Genes; Genes, Bacterial; Ornithine; Plasmids; Proline; Rhizobium	1986
Molecular characterization of a host-range-determining locus from Agrobacterium tumefaciens. Journal of bacteriology, 1986, Volume: 168, Issue:1 Topics: Arginine; Bacterial Proteins; Base Sequence; Operon; Plant Tumors; Plants; Plasmids; Rhizobium	1986
The hypervirulence of Agrobacterium tumefaciens A281 is encoded in a region of pTiBo542 outside of T-DNA. Journal of bacteriology, 1986, Volume: 168, Issue:3 Topics: Amino Acids; Arginine; DNA, Bacterial; Genes, Bacterial; Genetic Vectors; Indoleacetic Acids; Nicotiana; Plant Tumors; Plants; Plants, Toxic; Plasmids; Rhizobium; Virulence	1986
Eight DNA insertion events of Agrobacterium tumefaciens Ti-plasmids in isogenic sunflower genomes are all distinct. Biochemical and biophysical research communications, 1985, Aug-30, Volume: 131, Issue:1 Topics: Arginine; DNA, Bacterial; Helianthus; Mannitol; Nucleic Acid Hybridization; Oxazines; Plant Tumors; Plants; Plasmids; Rhizobium	1985
The in vitro effects of opines and other compounds on DNAs originating from bacteria, and from healthy and tumorous plant tissues. Experimental cell biology, 1985, Volume: 53, Issue:6 Topics: 9,10-Dimethyl-1,2-benzanthracene; Arginine; Cyclophosphamide; DNA Replication; DNA, Bacterial; DNA, Neoplasm; Indoleacetic Acids; Plant Tumors; Plants; Rhizobium	1985
Unusual plasmid DNA organization in an octopine crown gall tumor. Nucleic acids research, 1985, Jan-25, Volume: 13, Issue:2 Topics: Arginine; Chromosome Deletion; Cloning, Molecular; DNA, Neoplasm; DNA, Recombinant; Nucleic Acid Hybridization; Plant Tumors; Plasmids; Recombination, Genetic; Repetitive Sequences, Nucleic Acid; Rhizobium	1985
Efficient octopine Ti plasmid-derived vectors for Agrobacterium-mediated gene transfer to plants. Nucleic acids research, 1985, Jul-11, Volume: 13, Issue:13 Topics: Arginine; Cloning, Molecular; DNA, Bacterial; Genetic Vectors; Nicotiana; Nucleic Acid Hybridization; Plants; Plants, Toxic; Plasmids; Protoplasts; Rhizobium; Transformation, Genetic	1985
N2-(1-carboxyethyl)methionine. A 'pseudo-opine' in octopine-type crown-gall tumours. The Biochemical journal, 1985, Dec-01, Volume: 232, Issue:2 Topics: Arginine; Electrophoresis, Paper; Methionine; Plasmids; Rhizobium	1985
A comparison of virulence determinants in an octopine Ti plasmid, a nopaline Ti plasmid, and an Ri plasmid by complementation analysis of Agrobacterium tumefaciens mutants. Plasmid, 1984, Volume: 11, Issue:3 Topics: Arginine; DNA Transposable Elements; Genetic Complementation Test; Plant Tumors; Plasmids; Rhizobium; Species Specificity; Virulence	1984
Physical and functional map of an Agrobacterium tumefaciens tumor-inducing plasmid that confers a narrow host range. Journal of bacteriology, 1984, Volume: 160, Issue:2 Topics: Arginine; Base Sequence; Cloning, Molecular; DNA Restriction Enzymes; Escherichia coli; Genes, Bacterial; Plant Tumors; Plasmids; Rhizobium; Virulence	1984
Nucleotide sequence of the insertion sequence found in the T-DNA region of mutant Ti plasmid pTiA66 and distribution of its homologues in octopine Ti plasmid. Proceedings of the National Academy of Sciences of the United States of America, 1984, Volume: 81, Issue:23 Topics: Arginine; Base Sequence; Cloning, Molecular; DNA Restriction Enzymes; DNA Transposable Elements; DNA, Bacterial; Escherichia coli; Mutation; Nucleic Acid Hybridization; Plant Tumors; Plasmids; Rhizobium	1984
The functional organization of the nopaline A. tumefaciens plasmid pTiC58. Plasmid, 1980, Volume: 3, Issue:2 Topics: Arginine; Conjugation, Genetic; DNA Transposable Elements; DNA, Bacterial; Genes, Bacterial; Plasmids; Rhizobium	1980
Localization of the replication control region on the physical map of the octopine Ti plasmid. Plasmid, 1980, Volume: 4, Issue:2 Topics: Arginine; DNA Replication; DNA Restriction Enzymes; Genetic Vectors; Nucleotide Mapping; Plasmids; Rhizobium; Sequence Homology, Nucleic Acid	1980
The interaction of Agrobacterium Ti-plasmid DNA and plant cells. Proceedings of the Royal Society of London. Series B, Biological sciences, 1980, Nov-19, Volume: 210, Issue:1180 Topics: Amino Acids; Arginine; Chromosome Mapping; Cloning, Molecular; DNA Transposable Elements; DNA, Bacterial; Genetic Engineering; Plants; Plasmids; Rhizobium	1980
Hairy root: plasmid encodes virulence traits in Agrobacterium rhizogenes. Journal of bacteriology, 1980, Volume: 141, Issue:3 Topics: Arginine; Bacteriocins; Conjugation, Genetic; DNA Restriction Enzymes; Glutarates; Kanamycin; Plant Diseases; Plasmids; Rhizobium	1980
Characterization of Tn904 insertions in octopine Ti plasmid mutants of Agrobacterium tumefaciens. Journal of bacteriology, 1980, Volume: 144, Issue:1 Topics: Arginine; DNA Restriction Enzymes; DNA Transposable Elements; DNA, Bacterial; Mutation; Plant Tumors; Plasmids; Rhizobium	1980
Agrobacterium tumefaciens mutants affected in crown gall tumorigenesis and octopine catabolism. Journal of bacteriology, 1980, Volume: 144, Issue:2 Topics: Arginine; DNA Transposable Elements; Genes; Mutation; Plant Tumors; Plasmids; Rhizobium	1980
Relationship between the limited and wide host range octopine-type Ti plasmids of Agrobacterium tumefaciens. Journal of bacteriology, 1981, Volume: 146, Issue:2 Topics: Arginine; Base Sequence; DNA Restriction Enzymes; DNA, Bacterial; Nucleic Acid Hybridization; Plant Tumors; Plasmids; Rhizobium	1981
The use of transposons to introduce well-defined deletions in plasmids: possibilities for in vivo cloning. Plasmid, 1981, Volume: 6, Issue:1 Topics: Arginine; Chromosome Deletion; Cloning, Molecular; DNA Transposable Elements; DNA, Bacterial; Genetic Vectors; Plasmids; Recombination, Genetic; Repetitive Sequences, Nucleic Acid; Rhizobium	1981
Sizes and map positions of several plasmid-DNA-encoded transcripts in octopine-type crown gall tumors. Proceedings of the National Academy of Sciences of the United States of America, 1982, Volume: 79, Issue:1 Topics: Arginine; Cell Line; DNA; DNA Restriction Enzymes; Nicotiana; Nucleic Acid Hybridization; Plant Tumors; Plants, Toxic; Plasmids; Transcription, Genetic	1982
Genetic analysis of crown gall: fine structure map of the T-DNA by site-directed mutagenesis. Cell, 1981, Volume: 27, Issue:1 Pt 2 Topics: Arginine; Chromosome Mapping; DNA Restriction Enzymes; DNA Transposable Elements; DNA, Bacterial; Mutation; Plant Tumors; Plasmids; Recombination, Genetic; Rhizobium	1981
Physical mapping of DNA base sequence homologies between an octopine and a nopaline Ti plasmid of Agrobacterium tumefaciens. Journal of molecular biology, 1981, Oct-25, Volume: 152, Issue:2 Topics: Arginine; Base Sequence; Chromosome Mapping; DNA Restriction Enzymes; DNA, Bacterial; Electrophoresis, Agar Gel; Microscopy, Electron; Nucleic Acid Heteroduplexes; Nucleic Acid Hybridization; Plasmids; Rhizobium	1981
Construction and application of R prime plasmids, carrying different segments of an octopine Ti plasmid from Agrobacterium tumefaciens, for complementation of vir genes. Plasmid, 1982, Volume: 7, Issue:2 Topics: Arginine; Cloning, Molecular; DNA Replication; DNA Restriction Enzymes; DNA Transposable Elements; DNA, Recombinant; Genetic Complementation Test; Plant Tumors; Plasmids; R Factors; Rhizobium; Virulence	1982
A functional map of the replicator region of the octopine Ti plasmid. Plasmid, 1982, Volume: 7, Issue:2 Topics: Arginine; Carbenicillin; DNA Replication; DNA Transposable Elements; Gene Expression Regulation; Penicillin Resistance; Plant Tumors; Plasmids; Rhizobium; Transformation, Genetic	1982
Octopine Ti-plasmid deletion mutants of agrobacterium tumefaciens with emphasis on the right side of the T-region. Plasmid, 1982, Volume: 7, Issue:1 Topics: Arginine; Base Sequence; Chromosome Mapping; DNA Transposable Elements; DNA, Bacterial; Mutation; Plant Tumors; Plasmids; Rhizobium	1982
T-DNA organization in homogeneous and heterogeneous octopine-type crown gall tissues of Nicotiana tabacum. Cell, 1982, Volume: 30, Issue:2 Topics: Arginine; Cloning, Molecular; DNA; DNA Restriction Enzymes; DNA Transposable Elements; DNA, Bacterial; Methylation; Nicotiana; Nucleic Acid Hybridization; Plant Tumors; Plants, Toxic; Protoplasts; Rhizobium	1982
Wide host range cloning vectors: a cosmid clone bank of an Agrobacterium Ti plasmid. Plasmid, 1982, Volume: 8, Issue:1 Topics: Arginine; Chromosome Mapping; Genes; Genetic Vectors; Phenotype; Plasmids; Rhizobium	1982
Size, location and polarity of T-DNA-encoded transcripts in nopaline crown gall tumors; common transcripts in octopine and nopaline tumors. Cell, 1983, Volume: 32, Issue:4 Topics: Arginine; Base Sequence; Deoxyribonuclease HindIII; DNA Restriction Enzymes; Gene Expression; Nicotiana; Nucleic Acid Hybridization; Plant Tumors; Plants; Plants, Toxic; Plasmids; Protein Biosynthesis; Rhizobium; Transcription, Genetic	1983
T-DNA fragments of hairy root plasmid pRi8196 are distantly related to octopine and nopaline Ti plasmid T-DNA. Plasmid, 1984, Volume: 11, Issue:2 Topics: Arginine; Biological Evolution; Chromosome Mapping; DNA Restriction Enzymes; DNA, Bacterial; Nucleic Acid Hybridization; Plasmids; Rhizobium	1984
Nucleotide sequence and transcript mapping of the tmr gene of the pTiA6NC octopine Ti-plasmid: a bacterial gene involved in plant tumorigenesis. Journal of molecular and applied genetics, 1984, Volume: 2, Issue:4 Topics: Arginine; Base Sequence; Chromosome Mapping; DNA Transposable Elements; Genes, Bacterial; Plant Tumors; Plasmids; Rhizobium; Transcription, Genetic	1984
trans-Acting virulence functions of the octopine Ti plasmid from Agrobacterium tumefaciens. Journal of bacteriology, 1984, Volume: 158, Issue:2 Topics: Arginine; Cloning, Molecular; Escherichia coli; Mutation; Operon; Plant Tumors; Plasmids; Rhizobium	1984
Mapping of promoter-proximal regions by in vitro transcription of two Agrobacterium tumefaciens Ti-plasmids. Molecular biology reports, 1984, Volume: 10, Issue:1 Topics: Arginine; DNA-Directed RNA Polymerases; Electrophoresis, Agar Gel; Operon; Plasmids; Rhizobium; Transcription, Genetic	1984
Crown gall transformation of tobacco callus cells by cocultivation with Agrobacterium tumefaciens. Biochemical and biophysical research communications, 1984, Sep-17, Volume: 123, Issue:2 Topics: Arginine; Cell Transformation, Neoplastic; Cells, Cultured; Nicotiana; Plant Tumors; Plants, Toxic; Rhizobium	1984
Postmortem metabolism of short-finned squid muscle (Illex illecebrosus). Comparative biochemistry and physiology. B, Comparative biochemistry, 1984, Volume: 79, Issue:3 Topics: Adenine Nucleotides; Animals; Arginine; Decapodiformes; Energy Metabolism; Glucose; Glucose-6-Phosphate; Glucosephosphates; Glycogen; Kinetics; Muscles; Postmortem Changes; Temperature	1984
A radiotechnique suitable for the detection of octopine synthesis in crown-gall tissues grown in vitro. Analytical biochemistry, 1983, Oct-01, Volume: 134, Issue:1 Topics: Arginine; Carbon Radioisotopes; Clone Cells; Isotope Labeling; Plant Tumors	1983
Transfer of the octopine T-DNA segment to plant cells mediated by different types of Agrobacterium tumor- or root-inducing plasmids: generality of virulence systems. Journal of bacteriology, 1984, Volume: 158, Issue:1 Topics: Arginine; DNA, Bacterial; Genetic Complementation Test; Plant Tumors; Plants; Plasmids; Rhizobium; Virulence	1984
Octopine dehydrogenase from Pecten maximus: steady-state mechanism. Biochemistry, 1984, Mar-27, Volume: 23, Issue:7 Topics: Amino Acid Oxidoreductases; Arginine; NAD; Plants; Pyruvates; Pyruvic Acid	1984
[Preparation and properties of new catabolic substrates for two types of oncogenic plasmids of Agrobacterium tumefaciens]. Comptes rendus des seances de l'Academie des sciences. Serie D, Sciences naturelles, 1980, May-05, Volume: 290, Issue:17 Topics: Arginine; DNA, Recombinant; Galactose; Glucose; Glutamates; Mannose; Plant Tumors; Plasmids; Rhizobium	1980
Site-specific mutagenesis of Agrobacterium Ti plasmids and transfer of genes to plant cells. Journal of molecular and applied genetics, 1981, Volume: 1, Issue:2 Topics: Arginine; Cloning, Molecular; DNA, Bacterial; DNA, Viral; Escherichia coli; Mutation; Nicotiana; Plant Tumors; Plant Viruses; Plants, Toxic; Plasmids; Rhizobium	1981
Relationship between Nif plasmids of fast-growing Rhizobium species and Ti plasmids of Agrobacterium tumefaciens. Journal of bacteriology, 1982, Volume: 149, Issue:3 Topics: Arginine; Base Sequence; Nitrogen Fixation; Nucleic Acid Hybridization; Plant Tumors; Plasmids; Rhizobium	1982
Nucleotide sequence and transcript map of the Agrobacterium tumefaciens Ti plasmid-encoded octopine synthase gene. Journal of molecular and applied genetics, 1982, Volume: 1, Issue:6 Topics: Amino Acid Oxidoreductases; Amino Acid Sequence; Arginine; Base Sequence; Chromosome Mapping; Oxidoreductases Acting on CH-NH Group Donors; Plasmids; Rhizobium; RNA, Messenger; Transcription, Genetic	1982
Metabolism of arginine in invertebrates: relation to urea cycle and to other guanidine derivatives. Advances in experimental medicine and biology, 1982, Volume: 153 Topics: Animals; Arginine; Glycine; Guanidines; Hydroxylamines; Invertebrates; Nitrogen; Ornithine; Pyrimidines; Urea	1982
[Arginine, octopine and alanine during the tonic and phasic contraction of the anterior byssus retractor muscle of Mytilus edulis]. Journal de physiologie, 1982, Volume: 78, Issue:5 Topics: Alanine; Animals; Arginine; Bivalvia; Energy Metabolism; Muscle Contraction; Muscle, Smooth	1982
Retention of tumor markers in F1 progeny plants from in vitro induced octopine and nopaline tumor tissues. Cell, 1981, Volume: 24, Issue:3 Topics: Arginine; DNA, Bacterial; Meiosis; Nicotiana; Plant Tumors; Plants, Toxic; Plasmids; Rhizobium	1981
Transcription of the Agrobacterium Ti plasmid in the bacterium and in crown gall tumors. Plasmid, 1981, Volume: 6, Issue:1 Topics: Arginine; DNA, Bacterial; Nucleic Acid Hybridization; Oxazines; Plant Tumors; Plasmids; Rhizobium; RNA, Neoplasm; Transcription, Genetic	1981
Transposition of Tn904 encoding streptomycin resistance into the octopine Ti plasmid of Agrobacterium tumefaciens. Journal of bacteriology, 1980, Volume: 141, Issue:1 Topics: Arginine; DNA Transposable Elements; Drug Resistance, Microbial; Genes; Genetic Linkage; Mutation; Plasmids; R Factors; Rhizobium; Streptomycin	1980
Diversity among B6 strains of Agrobacterium tumefaciens. Journal of bacteriology, 1980, Volume: 141, Issue:3 Topics: Arginine; Bacteriophages; Ketoses; Lactose; Lysogeny; Plant Tumors; Plasmids; Rhizobium; Species Specificity	1980
Interactions between octopine and nopaline plasmids in Agrobacterium tumefaciens. Journal of bacteriology, 1980, Volume: 143, Issue:3 Topics: Arginine; Glutarates; Plant Tumors; Plasmids; Recombination, Genetic; Replicon; Rhizobium	1980
Tumor formation and rhizogenicity of Agrobacterium rhizogenes carrying Ti plasmids. Gene, 1980, Volume: 11, Issue:1-2 Topics: Arginine; Conjugation, Genetic; Phenotype; Plant Diseases; Plant Tumors; Plasmids; Recombination, Genetic; Rhizobium; Transformation, Bacterial	1980
High angle and ligand-induced low angle DNA bends incited by OccR lie in the same plane with OccR bound to the interior angle. Journal of molecular biology, 1995, Oct-13, Volume: 253, Issue:1 Topics: Agrobacterium tumefaciens; Arginine; Bacterial Proteins; Base Sequence; DNA Footprinting; DNA-Binding Proteins; Hydroxyl Radical; Ligands; Molecular Sequence Data; Nucleic Acid Conformation; Operator Regions, Genetic; Plasmids; Transcription Factors	1995
The sixty nucleotide OccR operator contains a subsite essential and sufficient for OccR binding and a second subsite required for ligand-responsive DNA bending. Journal of molecular biology, 1995, Nov-10, Volume: 253, Issue:5 Topics: Agrobacterium tumefaciens; Arginine; Bacterial Proteins; Base Sequence; DNA; DNA Footprinting; DNA-Binding Proteins; DNA, Bacterial; Ligands; Models, Molecular; Molecular Sequence Data; Nucleic Acid Conformation; Operator Regions, Genetic; Protein Binding; Recombinant Fusion Proteins; Transcription Factors	1995
An Agrobacterium virulence factor encoded by a Ti plasmid gene or a chromosomal gene is required for T-DNA transfer into plants. Molecular microbiology, 1995, Volume: 17, Issue:2 Topics: Acetophenones; Agrobacterium tumefaciens; Arginine; Bacterial Proteins; Base Sequence; Chromosomes, Bacterial; DNA-Binding Proteins; DNA, Bacterial; Gene Expression Regulation, Bacterial; Genes, Bacterial; Molecular Sequence Data; Plant Tumors; Plants; Plasmids; Protein Sorting Signals; Restriction Mapping; Sequence Analysis, DNA; Transformation, Genetic; Virulence; Virulence Factors	1995
Effect of acetosyringone on growth and oncogenic potential of Agrobacterium tumefaciens. Methods in molecular biology (Clifton, N.J.), 1995, Volume: 44 Topics: Acetophenones; Agrobacterium tumefaciens; Arginine; Bacterial Proteins; Carbohydrates; Chemotactic Factors; Gene Expression Regulation, Bacterial; Growth Inhibitors; Mutation; Phenols; Plant Tumors; Plasmids; Selection, Genetic; Virulence; Virulence Factors	1995
Peanut transformation. Methods in molecular biology (Clifton, N.J.), 1995, Volume: 44 Topics: Agriculture; Agrobacterium tumefaciens; Arachis; Arginine; Bacterial Proteins; Conjugation, Genetic; Cotyledon; Disease Susceptibility; Gene Expression Regulation, Bacterial; Genes, Plant; Genetic Engineering; Genetic Vectors; Glucuronidase; Introns; Kanamycin Kinase; Oxazines; Phosphotransferases (Alcohol Group Acceptor); Plant Leaves; Plant Proteins; Plant Tumors; Plants, Genetically Modified; Recombinant Fusion Proteins; Species Specificity; Transfection	1995
The octopine-type Ti plasmid pTiA6 of Agrobacterium tumefaciens contains a gene homologous to the chromosomal virulence gene acvB. Journal of bacteriology, 1995, Volume: 177, Issue:4 Topics: Agrobacterium tumefaciens; Alkaline Phosphatase; Amino Acid Sequence; Arginine; Bacterial Proteins; Base Sequence; Biological Transport; Chromosomes, Bacterial; DNA-Binding Proteins; Gene Expression Regulation, Bacterial; Genes, Bacterial; Genetic Complementation Test; Molecular Sequence Data; Plasmids; Reading Frames; Recombinant Fusion Proteins; Sequence Homology, Amino Acid; Transcription, Genetic; Virulence; Virulence Factors	1995
Activity of the Agrobacterium Ti plasmid conjugal transfer regulator TraR is inhibited by the product of the traM gene. Journal of bacteriology, 1995, Volume: 177, Issue:5 Topics: Agrobacterium tumefaciens; Arginine; Bacterial Proteins; Base Sequence; Conjugation, Genetic; DNA Transposable Elements; DNA-Binding Proteins; Gene Expression Regulation, Bacterial; Genes, Bacterial; Genes, Regulator; Molecular Sequence Data; Plasmids; Promoter Regions, Genetic; Transcription Factors	1995
Octopine and nopaline oxidases from Ti plasmids of Agrobacterium tumefaciens: molecular analysis, relationship, and functional characterization. Journal of bacteriology, 1994, Volume: 176, Issue:15 Topics: Agrobacterium tumefaciens; Amino Acid Sequence; Arginine; Base Sequence; Molecular Sequence Data; Oxidoreductases Acting on CH-NH Group Donors; Plasmids; Sequence Analysis, DNA; Sequence Homology, Amino Acid; Structure-Activity Relationship; Substrate Specificity	1994
Rapid divergence of Agrobacterium vitis octopine-cucumopine Ti plasmids from a recent common ancestor. Molecular & general genetics : MGG, 1993, Volume: 240, Issue:1 Topics: Arginine; Biological Evolution; Cloning, Molecular; Plasmids; Polymorphism, Restriction Fragment Length; Restriction Mapping; Rhizobium	1993
Altered-function mutations in the Agrobacterium tumefaciens OccR protein and in an OccR-regulated promoter. Journal of bacteriology, 1993, Volume: 175, Issue:23 Topics: Agrobacterium tumefaciens; Arginine; Bacterial Proteins; Base Sequence; Carrier Proteins; DNA-Binding Proteins; Dose-Response Relationship, Drug; Enzyme Induction; Gene Expression Regulation, Bacterial; Lac Operon; Membrane Proteins; Molecular Sequence Data; Mutation; Plasmids; Promoter Regions, Genetic; Recombinant Fusion Proteins; Transcription Factors	1993
Opine-regulated promoters and LysR-type regulators in the nopaline (noc) and octopine (occ) catabolic regions of Ti plasmids of Agrobacterium tumefaciens. Journal of bacteriology, 1994, Volume: 176, Issue:2 Topics: Agrobacterium tumefaciens; Arginine; Bacterial Proteins; Base Sequence; DNA-Binding Proteins; DNA, Bacterial; Molecular Sequence Data; Plasmids; Promoter Regions, Genetic; Protein Binding; Repressor Proteins; Sequence Homology, Nucleic Acid; Transcription Factors	1994
VirA, the plant-signal receptor, is responsible for the Ti plasmid-specific transfer of DNA to maize by Agrobacterium. Proceedings of the National Academy of Sciences of the United States of America, 1993, Apr-15, Volume: 90, Issue:8 Topics: Arginine; Bacterial Proteins; Chromosomes, Bacterial; DNA, Bacterial; Escherichia coli; Gene Expression Regulation, Bacterial; Genes, Bacterial; Genetic Complementation Test; Genetic Vectors; Kinetics; Mutation; Plasmids; Rhizobium; Transfection; Virulence Factors; Zea mays	1993
Ti plasmid-encoded octopine and nopaline catabolism in Agrobacterium: specificities of the LysR-type regulators OccR and NocR, and protein-induced DNA bending. Molecular & general genetics : MGG, 1995, Nov-01, Volume: 249, Issue:1 Topics: Arginine; Bacterial Proteins; Base Sequence; Binding Sites; DNA-Binding Proteins; DNA, Fungal; Gene Expression Regulation, Bacterial; Genes, Plant; Molecular Sequence Data; Open Reading Frames; Plasmids; Promoter Regions, Genetic; Repressor Proteins; Rhizobium; Transcription Factors	1995
Identification of Agrobacterium tumefaciens genes that direct the complete catabolism of octopine. Journal of bacteriology, 1996, Volume: 178, Issue:7 Topics: Agrobacterium tumefaciens; Amino Acid Sequence; Ammonia-Lyases; Arginase; Arginine; Bacterial Proteins; Base Sequence; Cysteine; DNA, Bacterial; Gene Expression Regulation, Bacterial; Genes, Bacterial; Molecular Sequence Data; Multigene Family; Mutagenesis, Insertional; Proline Oxidase; Sequence Homology, Amino Acid; Transcription, Genetic	1996
The conjugal transfer system of Agrobacterium tumefaciens octopine-type Ti plasmids is closely related to the transfer system of an IncP plasmid and distantly related to Ti plasmid vir genes. Journal of bacteriology, 1996, Volume: 178, Issue:14 Topics: Agrobacterium tumefaciens; Amino Acid Sequence; Arginine; Bacterial Outer Membrane Proteins; Bacterial Proteins; Base Sequence; Biological Evolution; Conjugation, Genetic; Fimbriae Proteins; Gene Expression Regulation, Bacterial; Gene Transfer Techniques; Genes, Bacterial; Models, Genetic; Molecular Sequence Data; Multigene Family; Plasmids; Replication Origin; Restriction Mapping; Sequence Homology, Amino Acid; Virulence	1996
Localization of OccR-activated and TraR-activated promoters that express two ABC-type permeases and the traR gene of Ti plasmid pTiR10. Molecular microbiology, 1996, Volume: 20, Issue:6 Topics: Alleles; Arginine; ATP-Binding Cassette Transporters; Bacterial Proteins; Bacteriophage T7; Base Sequence; DNA-Binding Proteins; DNA, Bacterial; Gene Expression Regulation, Bacterial; Membrane Transport Proteins; Molecular Sequence Data; Plasmids; Promoter Regions, Genetic; Restriction Mapping; Trans-Activators; Transcription Factors; Transcriptional Activation	1996
Effects of octopine on the serum cholesterol level in rats. Bioscience, biotechnology, and biochemistry, 1996, Volume: 60, Issue:1 Topics: Animals; Arginine; Cholesterol, Dietary; Cholesterol, LDL; Cholesterol, VLDL; Male; Organ Size; Rats; Rats, Sprague-Dawley; Tissue Distribution	1996
Metabolic and energy correlates of intracellular pH in progressive fatigue of squid (L. brevis) mantle muscle. The American journal of physiology, 1996, Volume: 271, Issue:5 Pt 2 Topics: Acidosis; Adenosine Triphosphate; Anaerobic Threshold; Anaerobiosis; Animals; Arginine; Decapodiformes; Energy Metabolism; Hydrogen; Hydrogen-Ion Concentration; Hydrolysis; Intracellular Membranes; Models, Biological; Muscle Fatigue; Muscles; Swimming	1996
Transcriptional regulation and locations of Agrobacterium tumefaciens genes required for complete catabolism of octopine. Journal of bacteriology, 1997, Volume: 179, Issue:1 Topics: Agrobacterium tumefaciens; Arginine; Conjugation, Genetic; Gene Expression Regulation, Bacterial; Genes, Bacterial; Operon; Ornithine; Plasmids; Proline; Transcription, Genetic	1997
Ti plasmid conjugation is independent of vir: reconstitution of the tra functions from pTiC58 as a binary system. Journal of bacteriology, 1997, Volume: 179, Issue:4 Topics: Agrobacterium tumefaciens; Arginine; Bacterial Proteins; Conjugation, Genetic; DNA Helicases; DNA, Bacterial; Escherichia coli Proteins; Gram-Negative Bacteria; Operon; Plasmids; Replication Origin; Transcription Factors; Virulence Factors	1997
GC/MS determination of biogenic amines in insect neurons. Methods in molecular biology (Clifton, N.J.), 1997, Volume: 72 Topics: Animals; Arginine; Biogenic Amines; Deuterium; Dopamine; Fluorescent Dyes; Ganglia, Invertebrate; Gas Chromatography-Mass Spectrometry; Grasshoppers; Immunohistochemistry; Isoquinolines; Neurons; Solvents; Tyramine	1997
Novel structural difference between nopaline- and octopine-type trbJ genes: construction of genetic and physical map and sequencing of trb/traI and rep gene clusters of a new Ti plasmid pTi-SAKURA. Biochimica et biophysica acta, 1998, Mar-04, Volume: 1396, Issue:1 Topics: Agrobacterium tumefaciens; Arginine; Base Sequence; Chromosome Mapping; Cloning, Molecular; DNA Helicases; DNA-Binding Proteins; Escherichia coli Proteins; Molecular Sequence Data; Multigene Family; Plasmids; Polymerase Chain Reaction; Sequence Analysis, DNA; Sequence Homology, Nucleic Acid; Trans-Activators	1998
Characterization of a new Agrobacterium tumefaciens strain from alfalfa. Archives of microbiology, 1998, Volume: 169, Issue:5 Topics: Agrobacterium tumefaciens; Arginine; California; Conjugation, Genetic; Medicago sativa; Plant Tumors; Plants; Plasmids; Virulence	1998
beta-Lactam synthetase: a new biosynthetic enzyme. Proceedings of the National Academy of Sciences of the United States of America, 1998, Aug-04, Volume: 95, Issue:16 Topics: Amidohydrolases; Amino Acid Sequence; Anti-Bacterial Agents; Arginine; Clavulanic Acid; Humans; Molecular Sequence Data; Mutagenesis; Sequence Homology, Amino Acid	1998
Wound-released chemical signals may elicit multiple responses from an Agrobacterium tumefaciens strain containing an octopine-type Ti plasmid. Journal of bacteriology, 1998, Volume: 180, Issue:21 Topics: Agrobacterium tumefaciens; Amino Acid Sequence; Arginine; Bacterial Proteins; Base Sequence; Carcinogenicity Tests; DNA, Bacterial; Lac Operon; Mass Spectrometry; Molecular Sequence Data; Open Reading Frames; Plasmids; Protein Biosynthesis; Regulon; Ribonucleases; Sequence Analysis, DNA; Virulence Factors	1998
Mannopinic acid and agropinic acid catabolism region of the octopine-type Ti plasmid pTi15955. Molecular microbiology, 1999, Volume: 31, Issue:1 Topics: Arginine; Bacterial Proteins; DNA-Binding Proteins; Gene Expression Regulation, Bacterial; Mannitol; Mutagenesis; Plasmids; Sequence Analysis, DNA; Transcription Factors; Transcription, Genetic; Transposases	1999
Perspectives: biosynthetic pathways. Biosynthesis meets bioinformatics. Science (New York, N.Y.), 2000, Feb-04, Volume: 287, Issue:5454 Topics: Arginine; Bacteria; Clavulanic Acid; Computational Biology; Cytidine Triphosphate; Erythritol; Hemiterpenes; Models, Chemical; Nucleotidyltransferases; Organophosphorus Compounds; Oxidation-Reduction; Recombinant Proteins; Sugar Phosphates; Thiamine Pyrophosphate	2000
The right end of the vir region of an octopine-type Ti plasmid contains four new members of the vir regulon that are not essential for pathogenesis. Journal of bacteriology, 2000, Volume: 182, Issue:6 Topics: Acetophenones; Amino Acid Sequence; Arginine; Lac Operon; Molecular Sequence Data; Plants; Plasmids; Recombinant Fusion Proteins; Regulon; Rhizobium; Single-Strand Specific DNA and RNA Endonucleases; Virulence	2000
The protective effects of hypoxia-induced hypometabolism in the Nautilus. Journal of comparative physiology. B, Biochemical, systemic, and environmental physiology, 2000, Volume: 170, Issue:4 Topics: Acid-Base Equilibrium; Adaptation, Physiological; Animals; Arginine; Basal Metabolism; Carbon Dioxide; Heart Rate; Hydrogen-Ion Concentration; Hypoxia; Mollusca; Muscles; Myocardium; Oxygen; Respiration; Succinic Acid	2000
Sequence analysis of the vir-region from Agrobacterium tumefaciens octopine Ti plasmid pTi15955. Journal of experimental botany, 2000, Volume: 51, Issue:347 Topics: Agrobacterium tumefaciens; Arginine; Bacterial Proteins; DNA Transposable Elements; DNA, Bacterial; Molecular Sequence Data; Open Reading Frames; Plasmids; Sequence Analysis, DNA; Virulence Factors	2000
Kinetic mechanism of the beta-lactam synthetase of Streptomyces clavuligerus. Biochemistry, 2000, Sep-19, Volume: 39, Issue:37 Topics: Adenosine Triphosphate; Amidohydrolases; Arginine; Binding, Competitive; Catalysis; Hydrogen-Ion Concentration; Kinetics; Models, Chemical; Streptomyces; Substrate Specificity	2000
Regulation of glycolysis during acclimation of scallops (Patinopecten yessoensis Jay) to anaerobiosis. Comparative biochemistry and physiology. Part B, Biochemistry & molecular biology, 2000, Volume: 127, Issue:1 Topics: Adenosine Triphosphate; Animals; Arginine; Fermentation; Fructosediphosphates; Fructosephosphates; Glucose-6-Phosphate; Glycolysis; Hypoxia; Mollusca; Oxygen; Oxygen Consumption; Phosphofructokinase-1; Time Factors	2000
Efficient vir gene induction in Agrobacterium tumefaciens requires virA, virG, and vir box from the same Ti plasmid. Journal of bacteriology, 2001, Volume: 183, Issue:13 Topics: Agrobacterium tumefaciens; Arginine; Bacterial Proteins; DNA-Binding Proteins; Gene Expression Regulation, Bacterial; Genes, Bacterial; Nicotiana; Plants, Toxic; Plasmids; Regulatory Sequences, Nucleic Acid; Transcription Factors; Transcriptional Activation; Virulence Factors	2001
Constitutive mutations of the OccR regulatory protein affect DNA bending in response to metabolites released from plant tumors. The Journal of biological chemistry, 2002, Feb-22, Volume: 277, Issue:8 Topics: Agrobacterium tumefaciens; Amino Acid Substitution; Arginine; Bacterial Proteins; Binding Sites; DNA Footprinting; DNA-Binding Proteins; DNA, Plant; Mutagenesis, Site-Directed; Mutation, Missense; Nucleic Acid Conformation; Plant Diseases; Plasmids; Recombinant Proteins; Transcription Factors	2002
Enzymatic synthesis of monocyclic beta-lactams. Bioorganic & medicinal chemistry letters, 2002, Feb-25, Volume: 12, Issue:4 Topics: Amidohydrolases; Arginine; Escherichia coli; Mass Spectrometry; Monobactams; Nuclear Magnetic Resonance, Biomolecular; Stereoisomerism; Transformation, Genetic	2002
Mutations in the occQ operator that decrease OccR-induced DNA bending do not cause constitutive promoter activity. The Journal of biological chemistry, 2002, May-03, Volume: 277, Issue:18 Topics: Agrobacterium tumefaciens; Arginine; Bacterial Proteins; Base Sequence; Chromatography, Gel; Dimerization; DNA Footprinting; DNA Primers; DNA-Binding Proteins; DNA, Bacterial; Gene Expression Regulation, Bacterial; Genotype; Kinetics; Molecular Sequence Data; Operon; Polymerase Chain Reaction; Promoter Regions, Genetic; Restriction Mapping; Transcription Factors	2002
Identification of sequences involved in the polyadenylation of higher plant nuclear transcripts using Agrobacterium T-DNA genes as models. The EMBO journal, 1983, Volume: 2, Issue:3 Topics: Agrobacterium tumefaciens; Amino Acid Oxidoreductases; Amino Acid Sequence; Arginine; Base Sequence; Chromosome Mapping; DNA, Bacterial; DNA, Plant; Genes, Bacterial; Models, Genetic; Molecular Sequence Data; Nicotiana; Poly A; RNA, Messenger; Sequence Analysis, DNA	1983
Engineered rhizosphere: the trophic bias generated by opine-producing plants is independent of the opine type, the soil origin, and the plant species. Applied and environmental microbiology, 2002, Volume: 68, Issue:5 Topics: Arginine; Lotus; Mannitol; Plant Roots; Soil Microbiology; Solanaceae	2002
Symplastic continuity between companion cells and the translocation stream: long-distance transport is controlled by retention and retrieval mechanisms in the phloem. Plant physiology, 2003, Volume: 131, Issue:4 Topics: Arginine; Benzofurans; Biological Transport, Active; Coleus; Disaccharides; Nicotiana; Plant Structures; Plants, Genetically Modified; Raffinose; Spiro Compounds; Sucrose	2003
[Determination of octopine in sepia skin]. Hoppe-Seyler's Zeitschrift fur physiologische Chemie, 1954, Volume: 297, Issue:1 Topics: Animals; Arginine; Fishes; Humans; Sepia; Skin	1954
[On the biogenesis of octopine in different tissues of Pecte maximus L]. Bulletin de la Societe de chimie biologique, 1959, Volume: 41 Topics: Amidines; Animals; Arginine; Mollusca	1959
[Metabolism of guanidylated derivatives. VIII. Biosynthesis of octopine and distribution of the enzyme controlling it in invertebrates]. Biochimica et biophysica acta, 1959, Volume: 35 Topics: Animals; Arginine; Invertebrates	1959
[Metabolism of guanidyl derivatives. IX. Biosynthesis of octopine: study of the mechanism of the reaction and some properties of octopine synthetase]. Biochimica et biophysica acta, 1961, Sep-16, Volume: 52 Topics: Amidines; Amino Acids; Arginine; Biochemical Phenomena; Ligases; Oxidoreductases	1961
[Metabolism of guanidyl derivatives. X. Metabolism of octopine: its biological role]. Biochimica et biophysica acta, 1961, Sep-16, Volume: 52 Topics: Amidines; Amino Acids; Arginine; Biochemical Phenomena	1961
Unwounded plants elicit Agrobacterium vir gene induction and T-DNA transfer: transformed plant cells produce opines yet are tumour free. Molecular microbiology, 2005, Volume: 57, Issue:6 Topics: Agrobacterium tumefaciens; Arginine; Bacterial Proteins; DNA, Bacterial; Gene Expression Regulation, Bacterial; Green Fluorescent Proteins; Nicotiana; Plant Tumors; Plants, Genetically Modified; Recombinant Fusion Proteins; Transcriptional Activation; Transformation, Genetic; Virulence	2005
A plasmid sequence from Rhizobium leguminosarum 300 contains homology to sequences near the octopine TL-DNA right border. Molecular & general genetics : MGG, 1987, Volume: 209, Issue:3 Topics: Amino Acid Sequence; Arginine; Base Sequence; DNA, Bacterial; Molecular Sequence Data; Nucleic Acid Hybridization; Plasmids; Rhizobium leguminosarum	1987
VirB1* promotes T-pilus formation in the vir-Type IV secretion system of Agrobacterium tumefaciens. Journal of bacteriology, 2007, Volume: 189, Issue:18 Topics: Agrobacterium tumefaciens; Amino Acid Sequence; Arginine; Bacterial Proteins; Fimbriae, Bacterial; Gene Expression Regulation, Bacterial; Kalanchoe; Molecular Sequence Data; Peptidoglycan Glycosyltransferase; Plant Leaves; Plant Tumors; Two-Hybrid System Techniques; Virulence; Virulence Factors	2007
The synthesis and properties of octopine and its diastereoisomer, isooctopine. The Journal of organic chemistry, 1946, Volume: 11, Issue:4 Topics: Arginine	1946
Most mutant OccR proteins that are defective in positive control hold operator DNA in a locked high-angle bend. Journal of bacteriology, 2011, Volume: 193, Issue:19 Topics: Agrobacterium tumefaciens; Arginine; Bacterial Proteins; Carrier Proteins; DNA-Binding Proteins; Membrane Proteins; Mutagenesis, Site-Directed; Mutation; Promoter Regions, Genetic; Transcription Factors	2011
Agrobacterium tumefaciens can obtain sulphur from an opine that is synthesized by octopine synthase using S-methylmethionine as a substrate. Molecular microbiology, 2012, Volume: 84, Issue:5 Topics: Agrobacterium tumefaciens; Amino Acid Oxidoreductases; Arabidopsis; Arginine; Nicotiana; Sulfur; Vitamin U	2012
Control of D-octopine formation in scallop adductor muscle as revealed through thermodynamic studies of octopine dehydrogenase. The Journal of experimental biology, 2012, May-01, Volume: 215, Issue:Pt 9 Topics: Adenosine Triphosphate; Amino Acid Oxidoreductases; Animals; Arginine; Binding Sites; Calorimetry; Kinetics; Models, Chemical; Movement; Muscles; NAD; Pectinidae; Pyruvic Acid; Substrate Specificity; Swimming; Thermodynamics	2012
Resource and competitive dynamics shape the benefits of public goods cooperation in a plant pathogen. Evolution; international journal of organic evolution, 2012, Volume: 66, Issue:6 Topics: Agrobacterium tumefaciens; Arginine; Models, Genetic; Plants; Plasmids; Virulence	2012
Ocean warming enhances malformations, premature hatching, metabolic suppression and oxidative stress in the early life stages of a keystone squid. PloS one, 2012, Volume: 7, Issue:6 Topics: Acclimatization; Analysis of Variance; Animals; Arginine; Atlantic Ocean; Catalase; Embryo, Nonmammalian; Embryonic Development; Energy Metabolism; Glutathione Transferase; Heat-Shock Proteins; Lipid Peroxidation; Loligo; Oxidative Stress; Oxygen Consumption; Superoxide Dismutase; Survival Rate; Temperature	2012
An increasing opine carbon bias in artificial exudation systems and genetically modified plant rhizospheres leads to an increasing reshaping of bacterial populations. Molecular ecology, 2014, Volume: 23, Issue:19 Topics: Animals; Arabidopsis; Arginine; Bacteria; Biodiversity; Carbon; DNA, Bacterial; Genes, Bacterial; Plant Exudates; Plant Roots; Plants, Genetically Modified; Rhizosphere; Soil Microbiology	2014
Characterization of Flavin-Containing Opine Dehydrogenase from Bacteria. PloS one, 2015, Volume: 10, Issue:9 Topics: Arginine; Flavins; Oxidoreductases Acting on CH-NH Group Donors; Pseudomonas putida	2015
Nopaline-type Ti plasmid of Agrobacterium encodes a VirF-like functional F-box protein. Scientific reports, 2015, Nov-20, Volume: 5 Topics: Agrobacterium; Amino Acid Sequence; Arginine; Bacterial Proteins; F-Box Proteins; Interferon Regulatory Factors; Luminescent Proteins; Microscopy, Confocal; Molecular Sequence Data; Nicotiana; Phylogeny; Plant Tumor-Inducing Plasmids; Plants, Genetically Modified; Protein Binding; Sequence Homology, Amino Acid; Viral Proteins; Virulence Factors	2015
Complete genome sequence of Burkholderia sp. strain PAMC28687, a potential octopine-utilizing bacterium isolated from Antarctica lichen. Journal of biotechnology, 2016, May-20, Volume: 226 Topics: Antarctic Regions; Arginine; Base Sequence; Burkholderia; Genome, Bacterial; Lichens; Sequence Analysis, DNA	2016
Fitness costs restrict niche expansion by generalist niche-constructing pathogens. The ISME journal, 2017, Volume: 11, Issue:2 Topics: Agrobacterium tumefaciens; Arginine; Bacterial Proteins; Carrier Proteins; Models, Molecular; Plants; Plants, Genetically Modified	2017
Structural basis for high specificity of octopine binding in the plant pathogen Agrobacterium tumefaciens. Scientific reports, 2017, 12-21, Volume: 7, Issue:1 Topics: Agrobacterium tumefaciens; Arginine; ATP-Binding Cassette Transporters; Bacterial Proteins; Host-Pathogen Interactions; Protein Binding	2017
Crystal structure of the ligand-binding domain of a LysR-type transcriptional regulator: transcriptional activation via a rotary switch. Molecular microbiology, 2018, Volume: 110, Issue:4 Topics: Agrobacterium tumefaciens; Arginine; Bacterial Proteins; Binding Sites; Carrier Proteins; Crystallography, X-Ray; DNA-Binding Proteins; DNA, Bacterial; Membrane Proteins; Promoter Regions, Genetic; Protein Binding; Protein Structure, Quaternary; Transcription Factors; Transcriptional Activation	2018
Coexpression of octopine and succinamopine Agrobacterium virulence genes to generate high quality transgenic events in maize by reducing vector backbone integration. Transgenic research, 2018, Volume: 27, Issue:6 Topics: Agrobacterium tumefaciens; Amino Acids; Arginine; Bacterial Proteins; DNA, Bacterial; Plants, Genetically Modified; Transformation, Genetic; Virulence; Virulence Factors; Zea mays	2018
Characterization and phylogenetic diversity of Allorhizobium vitis isolated from grapevine in Morocco. Journal of applied microbiology, 2020, Volume: 128, Issue:3 Topics: Agrobacterium; Arginine; Bacterial Proteins; Genetic Variation; Genome, Bacterial; Glutamine; Morocco; Phylogeny; Plant Tumors; Vitis	2020
The effect of opine on matrix metalloproteinase expression in mice with breast cancer. Archives of physiology and biochemistry, 2022, Volume: 128, Issue:2 Topics: Animals; Arginine; Breast Neoplasms; Female; Matrix Metalloproteinase 13; Matrix Metalloproteinase 3; Matrix Metalloproteinase 9; Matrix Metalloproteinases, Secreted; Mice; Mice, Inbred BALB C	2022
Development and validation of a UHPLC-ESI-QTOF mass spectrometry method to analyze opines, plant biomarkers of crown gall or hairy root diseases. Journal of chromatography. B, Analytical technologies in the biomedical and life sciences, 2021, Jan-01, Volume: 1162 Topics: Agrobacterium; Arginine; Biomarkers; Chromatography, High Pressure Liquid; Mannitol; Plant Diseases; Plant Roots; Plant Tumors; Reproducibility of Results; Spectrometry, Mass, Electrospray Ionization	2021
Characterization of the Agrobacterium octopine-cucumopine catabolic plasmid pAtAg67. Plasmid, 2022, Volume: 121 Topics: Agrobacterium; Arginine; DNA, Bacterial; Imidazoles; Plasmids; Pyridines; Rhizobium	2022

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