Page last updated: 2024-10-24

serine-type aminopeptidase activity

Definition

Target type: molecularfunction

Catalysis of the hydrolysis of a single N-terminal amino acid residue from a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine). [https://www.ebi.ac.uk/merops/about/glossary.shtml#AMINOPEPTIDASE, https://www.ebi.ac.uk/merops/about/glossary.shtml#CATTYPE]

Serine-type aminopeptidase activity refers to the enzymatic hydrolysis of peptide bonds at the N-terminus of a polypeptide chain. These enzymes specifically target the amino acid residue at the N-terminal end, cleaving the peptide bond between the first amino acid and the second. Serine-type aminopeptidases are characterized by the presence of a catalytic serine residue within their active site, which plays a crucial role in the hydrolysis reaction. The mechanism of action involves a nucleophilic attack by the activated hydroxyl group of the serine residue on the carbonyl carbon of the peptide bond. This attack leads to the formation of a covalent intermediate between the enzyme and the substrate. Subsequently, water molecules participate in the hydrolysis of the intermediate, releasing the N-terminal amino acid and regenerating the active enzyme. Serine-type aminopeptidases are involved in a wide range of biological processes, including protein processing, degradation, and signaling pathways. They play essential roles in the regulation of cellular function, development, and immune responses. Examples of serine-type aminopeptidases include aminopeptidase N, which is involved in the degradation of extracellular proteins, and dipeptidyl peptidase IV, which plays a role in glucose homeostasis.'
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Proteins (1)

ProteinDefinitionTaxonomy
Coagulation factor XIA coagulation factor XI that is encoded in the genome of human. [PRO:DNx, UniProtKB:P03951]Homo sapiens (human)

Compounds (9)

CompoundDefinitionClassesRoles
5-(n,n-hexamethylene)amiloride5-(N,N-hexamethylene)amiloride : A member of the class of pyrazines that is amiloride in which the two amino hydrogens at position N-5 are replaced by a hexamethylene moiety, resulting in the formation of an azepane ring.

5-(N,N-hexamethylene)amiloride: inhibitor of Na+-H+ exchange; has anti-HIV-1 activity
aromatic amine;
azepanes;
guanidines;
monocarboxylic acid amide;
organochlorine compound;
pyrazines
antineoplastic agent;
apoptosis inducer;
odorant receptor antagonist;
sodium channel blocker
amilorideamiloride : A member of the class of pyrazines resulting from the formal monoacylation of guanidine with the carboxy group of 3,5-diamino-6-chloropyrazine-2-carboxylic acid.

Amiloride: A pyrazine compound inhibiting SODIUM reabsorption through SODIUM CHANNELS in renal EPITHELIAL CELLS. This inhibition creates a negative potential in the luminal membranes of principal cells, located in the distal convoluted tubule and collecting duct. Negative potential reduces secretion of potassium and hydrogen ions. Amiloride is used in conjunction with DIURETICS to spare POTASSIUM loss. (From Gilman et al., Goodman and Gilman's The Pharmacological Basis of Therapeutics, 9th ed, p705)
aromatic amine;
guanidines;
organochlorine compound;
pyrazines
diuretic;
sodium channel blocker
benzamidine hydrochloride
melagatranazetidines;
carboxamidine;
dicarboxylic acid monoamide;
non-proteinogenic alpha-amino acid;
secondary amino compound
anticoagulant;
EC 3.4.21.5 (thrombin) inhibitor;
serine protease inhibitor
razaxabanrazaxaban: structure in first source
bms-262084BMS-262084: an azetidinone-based tryptase inhibitor; structure in first source
anabaenopeptin banabaenopeptin B: from cyanobacteria Planktothrix (Oscillatoria) rubescens
grassystatin agrassystatin A: isolated from a cyanobacterium, identified as Lyngbya cf.; structure in first source
sulfated pentagalloylglucosidesulfated pentagalloylglucoside: structure in first source