Target type: molecularfunction
Enables the transmembrane transfer of a solute by a channel that opens when a specific ligand has been bound by the channel complex or one of its constituent parts. [GOC:mtg_transport, ISBN:0815340729]
Ligand-gated channel activity is a molecular function that describes the ability of a protein to act as a channel that opens or closes in response to the binding of a specific ligand. Ligands can be neurotransmitters, hormones, ions, or other small molecules. When a ligand binds to the protein, it triggers a conformational change in the protein, which opens the channel. This allows ions or other molecules to pass through the membrane, which can have a variety of effects on the cell.
Ligand-gated channels are important for a variety of cellular processes, including:
* **Signal transduction:** Ligand-gated channels can be used to transduce signals from the extracellular environment to the intracellular environment. For example, neurotransmitters bind to ligand-gated channels on neurons, which triggers the opening of the channels and the influx of ions. This influx of ions can then trigger a nerve impulse.
* **Cellular communication:** Ligand-gated channels can be used to communicate between different cells. For example, hormones can bind to ligand-gated channels on target cells, which triggers the opening of the channels and the influx of ions. This influx of ions can then trigger a variety of intracellular signaling pathways.
* **Muscle contraction:** Ligand-gated channels are essential for muscle contraction. For example, acetylcholine binds to ligand-gated channels on muscle cells, which triggers the opening of the channels and the influx of calcium ions. This influx of calcium ions then triggers the contraction of the muscle.
* **Sensory perception:** Ligand-gated channels are involved in sensory perception. For example, taste buds contain ligand-gated channels that are activated by different types of molecules, which allows us to taste different flavors.
Ligand-gated channels are often the targets of drugs. For example, many anti-anxiety drugs work by blocking ligand-gated channels that are involved in the transmission of nerve impulses.
In summary, ligand-gated channel activity is a crucial molecular function that allows cells to respond to a variety of stimuli. It plays a role in many important cellular processes, including signal transduction, cellular communication, muscle contraction, and sensory perception.'
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Protein | Definition | Taxonomy |
---|---|---|
Neutral amino acid transporter B(0) | A neutral amino acid transporter B(0) that is encoded in the genome of human. [PRO:DNx, UniProtKB:Q15758] | Homo sapiens (human) |
Compound | Definition | Classes | Roles |
---|---|---|---|
hydroxyproline | hydroxyproline : A proline derivative that is proline substituted by at least one hydroxy group. Hydroxyproline: A hydroxylated form of the imino acid proline. A deficiency in ASCORBIC ACID can result in impaired hydroxyproline formation. | 4-hydroxyproline; L-alpha-amino acid zwitterion | human metabolite; mouse metabolite; plant metabolite |
serine | serine : An alpha-amino acid that is alanine substituted at position 3 by a hydroxy group. Serine: A non-essential amino acid occurring in natural form as the L-isomer. It is synthesized from GLYCINE or THREONINE. It is involved in the biosynthesis of PURINES; PYRIMIDINES; and other amino acids. | L-alpha-amino acid; proteinogenic amino acid; serine; serine family amino acid; serine zwitterion | algal metabolite; Escherichia coli metabolite; human metabolite; mouse metabolite; Saccharomyces cerevisiae metabolite |
glutamine | glutamine : An alpha-amino acid that consists of butyric acid bearing an amino substituent at position 2 and a carbamoyl substituent at position 4. Glutamine: A non-essential amino acid present abundantly throughout the body and is involved in many metabolic processes. It is synthesized from GLUTAMIC ACID and AMMONIA. It is the principal carrier of NITROGEN in the body and is an important energy source for many cells. L-glutamine : An optically active form of glutamine having L-configuration. | amino acid zwitterion; glutamine; glutamine family amino acid; L-alpha-amino acid; polar amino acid zwitterion; proteinogenic amino acid | EC 1.14.13.39 (nitric oxide synthase) inhibitor; Escherichia coli metabolite; human metabolite; metabolite; micronutrient; mouse metabolite; nutraceutical; Saccharomyces cerevisiae metabolite |
asparagine | asparagine : An alpha-amino acid in which one of the hydrogens attached to the alpha-carbon of glycine is substituted by a 2-amino-2-oxoethyl group. Asparagine: A non-essential amino acid that is involved in the metabolic control of cell functions in nerve and brain tissue. It is biosynthesized from ASPARTIC ACID and AMMONIA by asparagine synthetase. (From Concise Encyclopedia Biochemistry and Molecular Biology, 3rd ed) | amino acid zwitterion; asparagine; aspartate family amino acid; L-alpha-amino acid; proteinogenic amino acid | Escherichia coli metabolite; human metabolite; micronutrient; mouse metabolite; nutraceutical; plant metabolite; Saccharomyces cerevisiae metabolite |
4-hydroxyphenylglycine, (s)-isomer | L-4-hydroxyphenylglycine : The L-enantiomer of 4-hydroxyphenylglycine. | 4-hydroxyphenylglycine | |
D-serine | D-alpha-amino acid; serine; serine zwitterion | Escherichia coli metabolite; human metabolite; NMDA receptor agonist | |
gamma-glutamine-4-nitroanilide | gamma-glutamine-4-nitroanilide: substrate for glutaminase B.; RN given refers to (L)-isomer | ||
proline | proline : An alpha-amino acid that is pyrrolidine bearing a carboxy substituent at position 2. Proline: A non-essential amino acid that is synthesized from GLUTAMIC ACID. It is an essential component of COLLAGEN and is important for proper functioning of joints and tendons. | amino acid zwitterion; glutamine family amino acid; L-alpha-amino acid; proline; proteinogenic amino acid | algal metabolite; compatible osmolytes; Escherichia coli metabolite; micronutrient; mouse metabolite; nutraceutical; Saccharomyces cerevisiae metabolite |