racemase and epimerase activity
Definition
Target type: molecularfunction
Catalysis of a reaction that alters the configuration of one or more chiral centers in a molecule. [GOC:mah, ISBN:0198506732]
Racemase and epimerase activities are essential enzymatic functions that catalyze the interconversion of stereoisomers. Stereoisomers are molecules with the same chemical formula but different spatial arrangements of their atoms. Racemases catalyze the conversion of enantiomers, which are mirror images of each other. Epimerases, on the other hand, catalyze the conversion of diastereomers, which are stereoisomers that are not mirror images. These enzymes play crucial roles in various biological processes, including:
- **Metabolic Pathways:** Racemases and epimerases are involved in the synthesis and degradation of amino acids, carbohydrates, and other biomolecules. For example, D-amino acid racemases are important in bacterial cell wall biosynthesis, while epimerases are involved in the synthesis of sugars like UDP-galactose.
- **Signal Transduction:** Some racemases and epimerases are involved in the regulation of signaling pathways. For instance, D-amino acid oxidase, a racemase, plays a role in neurotransmission by converting D-serine to L-serine, a neurotransmitter.
- **Drug Target Identification:** The unique catalytic activity of racemases and epimerases makes them attractive targets for drug development. Inhibiting these enzymes can have therapeutic effects in various diseases, including cancer, bacterial infections, and neurological disorders.
- **Biotechnology and Synthetic Chemistry:** Racemases and epimerases are also used in biotechnological applications for producing enantiomerically pure compounds and in synthetic chemistry for creating novel stereoisomers.
The specific mechanism of action of racemases and epimerases varies depending on the enzyme and the substrate. However, they generally involve the formation of an enzyme-substrate intermediate, followed by a series of chemical steps that lead to the inversion or epimerization of the chiral center. The precise mechanism can involve proton transfer, hydride shift, or other chemical transformations. The understanding of these enzymatic activities is crucial for deciphering the complexities of biochemical reactions and developing new therapeutic strategies.'
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Proteins (1)
Protein | Definition | Taxonomy |
---|---|---|
Dehydrogenase/reductase SDR family member 9 | A dehydrogenase/reductase SDR family member 9 that is encoded in the genome of human. [PRO:DNx, UniProtKB:Q9BPW9] | Homo sapiens (human) |
Compounds (2)
Compound | Definition | Classes | Roles |
---|---|---|---|
indomethacin | indometacin : A member of the class of indole-3-acetic acids that is indole-3-acetic acid in which the indole ring is substituted at positions 1, 2 and 5 by p-chlorobenzoyl, methyl, and methoxy groups, respectively. A non-steroidal anti-inflammatory drug, it is used in the treatment of musculoskeletal and joint disorders including osteoarthritis, rheumatoid arthritis, gout, bursitis and tendinitis. Indomethacin: A non-steroidal anti-inflammatory agent (NSAID) that inhibits CYCLOOXYGENASE, which is necessary for the formation of PROSTAGLANDINS and other AUTACOIDS. It also inhibits the motility of POLYMORPHONUCLEAR LEUKOCYTES. | aromatic ether; indole-3-acetic acids; monochlorobenzenes; N-acylindole | analgesic; drug metabolite; EC 1.14.99.1 (prostaglandin-endoperoxide synthase) inhibitor; environmental contaminant; gout suppressant; non-steroidal anti-inflammatory drug; xenobiotic; xenobiotic metabolite |
6-hydroxy-2,5,7,8-tetramethylchroman-2-carboxylic acid | chromanol; monocarboxylic acid; phenols | antioxidant; ferroptosis inhibitor; neuroprotective agent; radical scavenger; Wnt signalling inhibitor |