Target type: cellularcomponent
Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules. [GOC:mah]
Membrane coats are specialized protein structures that assemble on the cytoplasmic face of cellular membranes. These coats serve as platforms for the recruitment and sorting of specific cargo molecules, playing crucial roles in various cellular processes, including endocytosis, exocytosis, and vesicle trafficking. The key components of membrane coats include:
1. **Coat Proteins:** These proteins are the building blocks of the coat structure. They typically have a characteristic domain structure, including a cargo-binding domain and a self-association domain. Examples include clathrin, COPI, COPII, and retromer.
2. **Adaptor Proteins:** These proteins act as intermediaries between cargo molecules and coat proteins. They possess specific binding sites for both cargo and coat components, ensuring the selective packaging of cargo into coated vesicles. Examples include AP1, AP2, and GGAs.
3. **Regulatory Proteins:** These proteins regulate the assembly and disassembly of coat structures. They can interact with coat proteins, adaptor proteins, or other cellular factors to control the timing and location of coat formation. Examples include dynamin and BAR domain proteins.
The specific composition and organization of the coat can vary depending on the type of membrane and the cellular process involved. For instance, clathrin coats are primarily involved in endocytosis, while COPI and COPII coats play critical roles in the transport of proteins between the Golgi apparatus and the endoplasmic reticulum.
**Clathrin-coated vesicles (CCVs)** are a prominent example of coated vesicles. Clathrin is a triskelion-shaped protein that assembles into a lattice-like structure, forming the characteristic polyhedral shape of CCVs. The assembly of clathrin coats is driven by the interactions between clathrin triskelia and adaptor proteins, such as AP2. These adaptors link cargo molecules, such as transmembrane receptors and signaling molecules, to the clathrin lattice.
**COPI-coated vesicles** are involved in retrograde transport from the Golgi apparatus to the endoplasmic reticulum (ER). COPI coats are composed of seven subunits, including α, β, β′, γ, δ, ε, and ζ. They bind to cargo proteins that have ER retention signals and facilitate their return to the ER.
**COPII-coated vesicles** mediate anterograde transport from the ER to the Golgi apparatus. COPII coats are made up of four major proteins: Sec13/31, Sec23/24, Sar1, and Sec16. They interact with cargo proteins that have ER export signals and direct their movement to the Golgi.
**Retromer** is a protein complex that mediates the retrieval of transmembrane cargo from endosomes to the Golgi apparatus. It consists of a cargo-selective sorting complex (CSC) and a membrane-associated protein complex (MAC). The CSC recognizes specific cargo proteins, while the MAC anchors the retromer complex to the endosomal membrane.
In summary, membrane coats are dynamic and highly organized structures that play essential roles in intracellular trafficking and membrane dynamics. Their assembly and disassembly are tightly regulated, ensuring the accurate and efficient transport of cargo molecules within the cell.'
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Protein | Definition | Taxonomy |
---|---|---|
Dynamin-1 | A dynamin-1 that is encoded in the genome of human. [PRO:DNx, UniProtKB:Q05193] | Homo sapiens (human) |
Synaptojanin-1 | A synaptojanin-1 that is encoded in the genome of human. [PRO:DNx, UniProtKB:O43426] | Homo sapiens (human) |
Compound | Definition | Classes | Roles |
---|---|---|---|
cetrimonium bromide | cetyltrimethylammonium bromide : The organic bromide salt that is the bromide salt of cetyltrimethylammonium; one of the components of the topical antiseptic cetrimide. | organic bromide salt; quaternary ammonium salt | detergent; surfactant |
n,n-dimethyl-1-dodecanamine | N,N-dimethyl-1-dodecanamine: increases body weight & feed efficiency in animals; RN given refers to parent cpd | ||
decylamine | decylamine: structure | alkylamine | |
myristic acid | Myristic Acid: A saturated 14-carbon fatty acid occurring in most animal and vegetable fats, particularly butterfat and coconut, palm, and nutmeg oils. It is used to synthesize flavor and as an ingredient in soaps and cosmetics. (From Dorland, 28th ed) tetradecanoate : A long-chain fatty acid anion that is the conjugate base of myristic acid; major species at pH 7.3. tetradecanoic acid : A straight-chain, fourteen-carbon, long-chain saturated fatty acid mostly found in milk fat. | long-chain fatty acid; straight-chain saturated fatty acid | algal metabolite; Daphnia magna metabolite; EC 3.1.1.1 (carboxylesterase) inhibitor; human metabolite |
dodecylamine | dodecylamine: RN given refers to parent cpd | primary aliphatic amine | |
dodecyltrimethylammonium bromide | dodecyltrimethylammonium bromide : A quarternary ammonium cation having one dodecyl and three methyl substituents around the central nitrogen. | bromide salt; quaternary ammonium salt | surfactant |
stearylamine | octadecan-1-amine : An 18-carbon primary aliphatic amine. stearylamine: RN given refers to parent cpd | primary aliphatic amine | film-forming compound |
n-tetradecylamine | N-tetradecylamine: RN given refers to parent cpd | alkylamine | |
1,12-dodecamethylenediamine | 1,12-dodecamethylenediamine: RN given refers to parent cpd dodecane-1,12-diamine : An alkane-alpha,omega-diamine that is dodecane substituted by amino groups at positions 1 and 12. | alkane-alpha,omega-diamine | |
stearyltrimethylammonium bromide | octadecyltrimethylammonium bromide: structure in first source | ||
epicatechin gallate | (-)-epicatechin-3-O-gallate : A gallate ester obtained by formal condensation of the carboxy group of gallic acid with the (3R)-hydroxy group of epicatechin. A natural product found in Parapiptadenia rigida. epicatechin gallate: a steroid 5alpha-reductase inhibitor; RN given refers to the (cis)-isomer; structure given in first source; isolated from green tea | catechin; gallate ester; polyphenol | EC 3.2.1.1 (alpha-amylase) inhibitor; EC 3.2.1.20 (alpha-glucosidase) inhibitor; metabolite |
ampelopsin | (+)-dihydromyricetin : An optically active form of dihydromyricetin having (2R,3R)-configuration. ampelopsin: hepatoprotective agent; isolated from Hovenia dulcis; RN given for (2R-trans)-isomer; structure in first source | dihydromyricetin; secondary alpha-hydroxy ketone | antineoplastic agent; antioxidant; metabolite |
epiafzelechin | (-)-epiafzelechin : A catechin derivative having (2R,3R)-configuration. epiafzelechin: antioxidant; 3'-deoxy form of epicatechin; structure in first source | catechin | plant metabolite |
ag-213 | tyrphostin 47: inhibits protein-tyrosine kinase activity of EGF-R both in vitro and in living cells; | ||
pyrvinium | pyrvinium : A quinolinium ion that is 1-methylquinolinium substituted by dimethylamino group at position 6 and a (E)-2-(2,5-dimethyl-1-phenyl-1H-pyrrol-3-yl)ethenyl at position 2. It is a anthelminthic drug active against pinworms. The salts of pyrvinium can also be used as anticancer agents. pyrvinium: RN given refers to parent cpd; synonyms vanquin & vankin refer to pamoate[2:1]; structure in Merck Index, 9th ed, #7810 | quinolinium ion | anthelminthic drug; antineoplastic agent |
trans-2,3',4,5'-tetrahydroxystilbene | trans-2,3',4,5'-tetrahydroxystilbene: hydroxystilbene oxyresveratrol | stilbenoid | |
ag 99 | tyrphostin A46: epidermal growth factor-urogastrone receptor antagonist | ||
chlorhexidine | chlorhexidine : A bisbiguanide compound with a structure consisting of two (p-chlorophenyl)guanide units linked by a hexamethylene bridge. Chlorhexidine: A disinfectant and topical anti-infective agent used also as mouthwash to prevent oral plaque. | biguanides; monochlorobenzenes | antibacterial agent; antiinfective agent |
eriodictyol 7-O-beta-D-glucopyranoside | beta-D-glucoside; flavanone glycoside; monosaccharide derivative; trihydroxyflavanone | plant metabolite; radical scavenger | |
dynole 34-2 | dynole 34-2: a dynamin inhibitor; structure in first source | ||
n'-(3,4-dihydroxybenzylidene)-3-hydroxy-2-naphthahydrazide | catechols; hydrazide; hydrazone; naphthols | EC 3.6.5.5 (dynamin GTPase) inhibitor |