Target type: biologicalprocess
The chemical reactions and pathways resulting in the formation of glyceraldehyde-3-phosphate, an important intermediate in glycolysis. [GOC:ai]
Glyceraldehyde-3-phosphate (G3P) biosynthesis is a crucial step in carbohydrate metabolism, particularly in glycolysis and gluconeogenesis. It involves the conversion of dihydroxyacetone phosphate (DHAP) to G3P, a key intermediate in both pathways. This interconversion is catalyzed by the enzyme triosephosphate isomerase (TIM).
**Detailed Process:**
1. **Starting Material:** The process begins with DHAP, a three-carbon sugar phosphate.
2. **Enzyme Action:** TIM, a highly efficient enzyme, facilitates the reversible isomerization of DHAP to G3P. The mechanism involves a series of steps:
- **Proton Abstraction:** TIM abstracts a proton from the hydroxyl group at the C2 position of DHAP, forming an enolate intermediate.
- **Proton Transfer:** The enolate intermediate then donates a proton to the C1 position of DHAP, resulting in the formation of G3P.
3. **Equilibrium:** The reaction is readily reversible, with the equilibrium favoring G3P formation. However, the continuous removal of G3P in downstream metabolic processes drives the reaction towards G3P production.
**Significance:**
- **Glycolysis:** G3P is a key substrate for the subsequent steps of glycolysis, leading to ATP production.
- **Gluconeogenesis:** G3P serves as a precursor for the synthesis of glucose from non-carbohydrate sources.
- **Biosynthesis:** G3P is a precursor for the biosynthesis of various essential molecules, including glycerol, fatty acids, and amino acids.
**Regulation:**
The activity of TIM is regulated by factors such as pH, temperature, and substrate availability.
**Overall, G3P biosynthesis is a vital metabolic process that plays a crucial role in energy production, glucose homeostasis, and the biosynthesis of essential molecules.**'
"
Protein | Definition | Taxonomy |
---|---|---|
Triosephosphate isomerase | A triosephosphate isomerase that is encoded in the genome of human. [PRO:DNx, UniProtKB:P60174] | Homo sapiens (human) |
Transketolase | A transketolase that is encoded in the genome of human. [PRO:DNx, UniProtKB:P29401] | Homo sapiens (human) |
Compound | Definition | Classes | Roles |
---|---|---|---|
thiamine | thiamine(1+) : A primary alcohol that is 1,3-thiazol-3-ium substituted by (4-amino-2-methylpyrimidin-5-yl)methyl, methyl and 2-hydroxyethyl groups at positions 3, 4 and 5, respectively. | primary alcohol; vitamin B1 | Escherichia coli metabolite; human metabolite; mouse metabolite; Saccharomyces cerevisiae metabolite |
phosphoglycolohydroxamate | phosphoglycolohydroxamate: inhibits DHAP (dihydroxyacetone phosphate)-converting enzymes; structure phosphoglycolohydroxamic acid : The hydroxamate of phosphoglycolic acid. | amidoalkyl phosphate; hydroxamic acid | EC 5.3.1.1 (triose-phosphate isomerase) inhibitor |
thiamine thiazolone pyrophosphate | thiamine thiazolone pyrophosphate: structure | ||
methyl brevifolincarboxylate | methyl brevifolincarboxylate : An organic heterotricyclic compound that is 1,2,3,5-tetrahydrocyclopenta[c]isochromene substituted by hydroxy groups at positions 7, 8 and 9, oxo groups at positions 3 and 5 and a methoxycarbonyl group at position 1. Isolated from Phyllanthus urinaria and Phyllanthus niruri, it exhibits vasorelaxant activity. methyl brevifolincarboxylate: isolated from Phyllanthus urinaria; structure in first source | cyclic ketone; delta-lactone; organic heterotricyclic compound; phenols | EC 5.99.1.2 (DNA topoisomerase) inhibitor; EC 5.99.1.3 [DNA topoisomerase (ATP-hydrolysing)] inhibitor; metabolite; platelet aggregation inhibitor; radical scavenger; vasodilator agent |