Page last updated: 2024-10-24

homocysteine catabolic process

Definition

Target type: biologicalprocess

The chemical reactions and pathways resulting in the breakdown of homocysteine, the amino acid alpha-amino-gamma-mercaptobutanoic acid. [GOC:jl]

Homocysteine catabolism is a critical metabolic process that plays a vital role in maintaining cellular health and preventing the accumulation of toxic homocysteine. Homocysteine is a sulfur-containing amino acid that is a byproduct of methionine metabolism. While it is a normal component of the body, elevated homocysteine levels can lead to various health problems, including cardiovascular disease, neural tube defects, and cognitive decline.

The catabolic process of homocysteine involves two primary pathways: remethylation and transsulfuration.

**Remethylation:**

* This pathway converts homocysteine back to methionine, a vital amino acid required for various cellular functions.
* The conversion is catalyzed by the enzyme tetrahydrofolate reductase (THF reductase) in the presence of tetrahydrofolic acid (THF), a coenzyme derived from folate.
* This pathway requires the participation of vitamin B12 as a cofactor for the enzyme methionine synthase.

**Transsulfuration:**

* This pathway converts homocysteine to cysteine, another essential amino acid.
* The process involves a series of enzymatic reactions catalyzed by cystathionine beta-synthase (CBS) and cystathionine gamma-lyase (CSE).
* The first step involves the condensation of homocysteine and serine to form cystathionine.
* Cystathionine is then cleaved by CSE to produce cysteine, alpha-ketobutyrate, and ammonia.

**Factors Influencing Homocysteine Metabolism:**

* **Genetic predisposition:** Variations in the genes encoding CBS and CSE can lead to deficiencies in these enzymes, resulting in hyperhomocysteinemia.
* **Nutritional status:** Deficiencies in folate, vitamin B12, and B6 can impair homocysteine metabolism.
* **Lifestyle factors:** Smoking, alcohol consumption, and a lack of physical activity can also contribute to elevated homocysteine levels.

**Regulation of Homocysteine Catabolism:**

* The activity of CBS and CSE is tightly regulated by various factors, including substrate availability, cofactor levels, and hormonal signals.
* These enzymes are responsive to changes in the cellular environment and are subject to feedback inhibition by cysteine and other sulfur-containing compounds.

**Significance of Homocysteine Catabolism:**

* Maintaining homocysteine levels within a healthy range is crucial for overall health and well-being.
* Homocysteine catabolism is essential for the production of important amino acids and plays a vital role in cellular function, DNA synthesis, and methylation reactions.
* The disruption of this process can lead to various health problems, emphasizing the importance of proper nutrition, lifestyle choices, and genetic considerations.

**Clinical Implications:**

* High homocysteine levels (hyperhomocysteinemia) are associated with an increased risk of cardiovascular disease, neural tube defects, cognitive decline, and other health issues.
* Screening for homocysteine levels is often recommended for individuals with risk factors, such as family history, certain medical conditions, and dietary deficiencies.
* Treatment options for hyperhomocysteinemia include lifestyle modifications, supplementation with folate, vitamin B12, and B6, and in some cases, medications.
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Proteins (2)

ProteinDefinitionTaxonomy
Bleomycin hydrolaseA bleomycin hydrolase that is encoded in the genome of human. [PRO:DNx, UniProtKB:Q13867]Homo sapiens (human)
Cystathionine beta-synthaseA cystathionine beta-synthase that is encoded in the genome of human. [PRO:DNx, UniProtKB:P35520]Homo sapiens (human)

Compounds (9)

CompoundDefinitionClassesRoles
aminooxyacetic acid(aminooxy)acetic acid : A member of the class of hydroxylamines that is acetic acid substituted at postion 2 by an aminooxy group. It is a compound which inhibits aminobutyrate aminotransferase activity in vivo, resulting in increased levels of gamma-aminobutyric acid in tissues.

Aminooxyacetic Acid: A compound that inhibits aminobutyrate aminotransferase activity in vivo, thereby raising the level of gamma-aminobutyric acid in tissues.
amino acid;
hydroxylamines;
monocarboxylic acid
anticonvulsant;
EC 2.6.1.19 (4-aminobutyrate--2-oxoglutarate transaminase) inhibitor;
EC 4.2.1.22 (cystathionine beta-synthase) inhibitor;
nootropic agent
aurintricarboxylic acidaurintricarboxylic acid : A member of the class of quinomethanes that is 3-methylidene-6-oxocyclohexa-1,4-diene-1-carboxylic acid in which the methylidene hydrogens are replaced by 4-carboxy-3-hydroxyphenyl groups. The trisodium salt is the biological stain 'chrome violet CG' while the triammonium salt is 'aluminon'.

Aurintricarboxylic Acid: A dye which inhibits protein biosynthesis at the initial stages. The ammonium salt (aluminon) is a reagent for the colorimetric estimation of aluminum in water, foods, and tissues.
monohydroxybenzoic acid;
quinomethanes;
tricarboxylic acid
fluorochrome;
histological dye;
insulin-like growth factor receptor 1 antagonist
hypericin
agathisflavoneagathisflavone : A biflavonoid that is obtained by oxidative coupling of two molecules of apigenin resulting in a bond between positions C-6 and C-8 of the two chromene rings.

agathisflavone: bis-apigenin coupled at 6 and 8 positions; isolated from the plant Canarium manii; has hepatoprotective activity against carbon tetrachloride-induced hepatotoxicity
biaryl;
biflavonoid;
hydroxyflavone
antineoplastic agent;
antiviral agent;
hepatoprotective agent;
metabolite
cupressuflavonecupressuflavone : A biflavonoid that is obtained by oxidative coupling of two molecules of apigenin resulting in a bond between positions C-8 of the two chromene rings respectively. Isolated from Cupressus sempervirens and Juniperus occidentalis, it exhibits free radical scavenging and antielastase activities.

cupressuflavone: from Cupressus macrocarpa; structure in first source
biflavonoid;
hydroxyflavone;
ring assembly
EC 3.4.21.37 (leukocyte elastase) inhibitor;
metabolite;
radical scavenger
myricetin7-hydroxyflavonol;
hexahydroxyflavone
antineoplastic agent;
antioxidant;
cyclooxygenase 1 inhibitor;
food component;
geroprotector;
hypoglycemic agent;
plant metabolite
podocarpusflavone apodocarpusflavone A: isolated from Podocarpus imbricatusflavonoid oligomer
bleomycinbleomycinantineoplastic agent;
metabolite
rubrolide arubrolide A: from Synoicum prunum; structure in first source