Page last updated: 2024-10-24

protein-containing complex localization

Definition

Target type: biologicalprocess

A localization process that acts on a protein complex; the complex is transported to, or maintained in, a specific location. [GOC:mah]

Protein-containing complex localization is a fundamental biological process that ensures the proper spatial organization and function of cellular components. It involves the dynamic movement and precise targeting of protein complexes to specific subcellular locations. This intricate process is orchestrated by a complex interplay of molecular mechanisms, including:

1. **Signal Recognition and Binding:** The journey begins with the recognition of specific targeting signals embedded within the protein complex or its constituent proteins. These signals, often short amino acid sequences, act as "zip codes" guiding the complex to its designated destination.

2. **Cargo Adaptor Proteins:** Once the targeting signal is recognized, adaptor proteins bind to the complex, forming a bridge between the cargo and the transport machinery. These adaptors play a crucial role in mediating the interaction between the complex and the appropriate transport vesicle.

3. **Vesicle Formation and Trafficking:** The protein complex, now associated with adaptor proteins, is packaged into specialized transport vesicles. These vesicles bud off from donor compartments, such as the endoplasmic reticulum (ER) or Golgi apparatus, and travel through the intricate network of cellular pathways to their final destination.

4. **Motor Proteins and Microtubules:** The movement of vesicles is powered by motor proteins, such as kinesins and dyneins, which bind to the vesicle surface and "walk" along microtubule tracks. These tracks provide a highway system for the efficient transport of cargo to distant locations within the cell.

5. **Tethering and Docking:** As the vesicle approaches its target compartment, tethering factors help to capture and anchor it. These factors act like molecular grappling hooks, ensuring that the vesicle is brought into close proximity with its destination.

6. **Fusion and Release:** Finally, the vesicle membrane fuses with the target compartment membrane, releasing the protein complex into its final destination. This fusion event is mediated by specific SNARE proteins that reside on both the vesicle and the target membrane.

7. **Post-Localization Regulation:** Once the protein complex reaches its destination, it may undergo further modifications or interactions to ensure its proper function. These modifications can include protein phosphorylation, ubiquitination, or interactions with other proteins.

These intricate steps ensure the precise and regulated movement of protein complexes to their appropriate subcellular locations, enabling the cell to maintain its structure, function, and communication within the organism. It is a critical process that underpins many cellular processes, including signal transduction, cellular metabolism, and organelle biogenesis.'
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Proteins (3)

ProteinDefinitionTaxonomy
Peptidyl-prolyl cis-trans isomerase FKBP4A peptidyl-prolyl cis-trans isomerase FKBP4 that is encoded in the genome of human. [PRO:DNx, UniProtKB:Q02790]Homo sapiens (human)
EzrinAn ezrin that is encoded in the genome of human. [PRO:CNA, UniProtKB:P15311]Homo sapiens (human)
Baculoviral IAP repeat-containing protein 5A baculoviral IAP repeat-containing protein 5 that is encoded in the genome of human. [PMID:12719470, PMID:15917996, PMID:20929775, PRO:KER]Homo sapiens (human)

Compounds (10)

CompoundDefinitionClassesRoles
cycloheximidecycloheximide : A dicarboximide that is 4-(2-hydroxyethyl)piperidine-2,6-dione in which one of the hydrogens attached to the carbon bearing the hydroxy group is replaced by a 3,5-dimethyl-2-oxocyclohexyl group. It is an antibiotic produced by the bacterium Streptomyces griseus.

Cycloheximide: Antibiotic substance isolated from streptomycin-producing strains of Streptomyces griseus. It acts by inhibiting elongation during protein synthesis.
antibiotic fungicide;
cyclic ketone;
dicarboximide;
piperidine antibiotic;
piperidones;
secondary alcohol
anticoronaviral agent;
bacterial metabolite;
ferroptosis inhibitor;
neuroprotective agent;
protein synthesis inhibitor
benziodaronebenziodarone: minor descriptor (75-89); on-line & INDEX MEDICUS search BENZOFURANS (68-89) & IODOBENZOATES (74)aromatic ketone
nsc668394
3-(3-pyridyl)-1-propyl-(2s)-1-(3,3-dimethyl-1,2-dioxopentyl)-2-pyrrolidinecarboxylate
3-cyano-4-phenyl-6-(3-bromo-6-hydroxyphenyl)-2-pyridone3-cyano-4-phenyl-6-(3-bromo-6-hydroxyphenyl)-2-pyridone : A member of the class of pyridones that is 2-pyridone carrying cyano, phenyl and 3-bromo-6-hydroxyphenyl substituents at positions 3, 4 and 6 respectivelybromophenol;
nitrile;
pyridone
biricodarbiricodar: a non-macrocyclic ligand for FKBP12; structure in first sourcealpha-amino acid ester
pd 407824
l 683590immunomycin: from Streptomyces hygroscopicus; structure given in first sourceether;
lactol;
macrolide;
secondary alcohol
antifungal agent;
bacterial metabolite;
immunosuppressive agent
cyclosporineramihyphin A: one of the metabolites produced by Fusarium sp. S-435; RN given refers to cpd with unknown MFhomodetic cyclic peptideanti-asthmatic drug;
anticoronaviral agent;
antifungal agent;
antirheumatic drug;
carcinogenic agent;
dermatologic drug;
EC 3.1.3.16 (phosphoprotein phosphatase) inhibitor;
geroprotector;
immunosuppressive agent;
metabolite
timcodartimcodar: a mutlidrug resistance inhibitor; structure in first source