Page last updated: 2024-10-24

plasmid partitioning

Definition

Target type: biologicalprocess

Any process in which plasmids are segregated or distributed into daughter cells upon cell division. [GOC:mah]

Plasmid partitioning is a crucial process for the stable inheritance of plasmids in bacterial cells. Plasmids are extrachromosomal DNA molecules that can replicate independently of the host chromosome, providing bacteria with beneficial traits such as antibiotic resistance or the ability to degrade specific compounds. However, during cell division, plasmids must be accurately distributed to both daughter cells to ensure their continued propagation.

The process of plasmid partitioning involves a complex interplay of genetic and protein components. Key players include:

**ParA:** This protein acts as a dynamic polymer that forms filaments along the bacterial chromosome. It exhibits ATPase activity, which is essential for its polymerization and depolymerization.

**ParB:** This protein binds specifically to the parS site, a short DNA sequence located on the plasmid. ParB acts as a bridge between the plasmid and the ParA filaments.

**ParS:** This sequence serves as a recognition site for ParB protein binding.

**Mechanism of Partitioning:**

1. **ParB binding:** ParB proteins bind to the parS site on the plasmid, forming a complex that marks the plasmid for partitioning.

2. **ParA polymerization:** ParA proteins polymerize along the bacterial chromosome, creating a network of filaments that extend from the cell poles towards the center.

3. **Plasmid movement:** The ParB-plasmid complex interacts with the ParA filaments. This interaction drives the movement of the plasmids towards the opposite poles of the dividing cell.

4. **Segregation:** As the cell elongates, the ParA filaments progressively shorten, pushing the plasmids further apart and ensuring their proper segregation into the daughter cells.

5. **Depolymerization:** Once the plasmids have reached the poles, the ParA filaments depolymerize, allowing the cell to complete division with each daughter cell inheriting a copy of the plasmid.

**Regulation:**

The efficiency of plasmid partitioning is regulated by various factors, including:

* **Plasmid copy number:** The number of plasmid copies per cell influences the strength of partitioning.
* **Cell growth rate:** Faster growth rates can lead to less efficient partitioning.
* **Environmental conditions:** Stress conditions can affect the expression of partitioning genes, potentially altering the efficiency of the process.

**Importance of Plasmid Partitioning:**

The accurate partitioning of plasmids is vital for bacterial survival and evolution. It ensures that beneficial traits encoded by the plasmids are stably inherited by subsequent generations, promoting the spread of advantageous genes within bacterial populations.

Efficient plasmid partitioning also plays a crucial role in biotechnology, where plasmids are used as vectors for gene cloning and expression. Understanding the mechanisms of plasmid partitioning allows scientists to optimize plasmid stability in different cellular systems and for specific applications.'
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Proteins (2)

ProteinDefinitionTaxonomy
DNA topoisomerase 4 subunit BA DNA topoisomerase 4 subunit B that is encoded in the genome of Escherichia coli K-12. [PRO:DNx, UniProtKB:P20083]Escherichia coli K-12
DNA topoisomerase 4 subunit AA DNA topoisomerase 4 subunit A that is encoded in the genome of Escherichia coli K-12. [PRO:DNx, UniProtKB:P0AFI2]Escherichia coli K-12

Compounds (2)

CompoundDefinitionClassesRoles
ciprofloxacinciprofloxacin : A quinolone that is quinolin-4(1H)-one bearing cyclopropyl, carboxylic acid, fluoro and piperazin-1-yl substituents at positions 1, 3, 6 and 7, respectively.

Ciprofloxacin: A broad-spectrum antimicrobial carboxyfluoroquinoline.
aminoquinoline;
cyclopropanes;
fluoroquinolone antibiotic;
N-arylpiperazine;
quinolinemonocarboxylic acid;
quinolone;
quinolone antibiotic;
zwitterion
antibacterial drug;
antiinfective agent;
antimicrobial agent;
DNA synthesis inhibitor;
EC 5.99.1.3 [DNA topoisomerase (ATP-hydrolysing)] inhibitor;
environmental contaminant;
topoisomerase IV inhibitor;
xenobiotic
novobiocinnovobiocin : A coumarin-derived antibiotic obtained from Streptomyces niveus.

Novobiocin: An antibiotic compound derived from Streptomyces niveus. It has a chemical structure similar to coumarin. Novobiocin binds to DNA gyrase, and blocks adenosine triphosphatase (ATPase) activity. (From Reynolds, Martindale The Extra Pharmacopoeia, 30th ed, p189)
carbamate ester;
ether;
hexoside;
hydroxycoumarin;
monocarboxylic acid amide;
monosaccharide derivative;
phenols
antibacterial agent;
antimicrobial agent;
EC 5.99.1.3 [DNA topoisomerase (ATP-hydrolysing)] inhibitor;
Escherichia coli metabolite;
hepatoprotective agent