Target type: biologicalprocess
The chemical reactions and pathways involving phosphatidylserines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of L-serine. They are important constituents of cell membranes. [ISBN:0198506732]
Phosphatidylserine (PS) metabolic process is a fundamental pathway in cellular physiology, responsible for the synthesis, degradation, and transport of PS, a crucial phospholipid component of cell membranes. The process involves a series of intricate enzymatic reactions and membrane transport mechanisms, tightly regulated to ensure proper PS levels and membrane integrity.
**1. Synthesis:** PS biosynthesis occurs mainly in the endoplasmic reticulum (ER) through two primary pathways:
- **CDP-diacylglycerol (CDP-DAG) pathway:** This pathway is the primary route for PS synthesis in most organisms. It starts with the formation of CDP-DAG, which then reacts with L-serine to produce PS.
- **Decarboxylation pathway:** This pathway uses phosphatidylethanolamine (PE) as a precursor, decarboxylating it to generate PS.
**2. Degradation:** PS degradation occurs primarily in lysosomes, the cellular "recycling centers." Lysosomal enzymes, such as phospholipases, break down PS into its component parts, including fatty acids and serine.
**3. Transport:** PS trafficking is critical for maintaining cellular function. It involves the movement of PS between different cellular compartments, including the ER, Golgi apparatus, and plasma membrane. This movement is facilitated by specific transporter proteins that bind to PS and shuttle it to its destination.
**4. Function:** PS plays a critical role in diverse cellular functions, including:
- **Membrane integrity:** PS contributes to maintaining the structural integrity and fluidity of cell membranes.
- **Signal transduction:** PS can act as a signaling molecule, involved in pathways regulating cell growth, apoptosis (programmed cell death), and coagulation.
- **Apoptosis:** During apoptosis, PS translocates from the inner leaflet of the plasma membrane to the outer leaflet. This "flip-flop" event exposes PS on the cell surface, serving as a "eat me" signal for phagocytes, facilitating the removal of apoptotic cells.
**5. Regulation:** PS metabolism is tightly regulated by a complex interplay of factors, including:
- **Enzymatic activity:** The activity of enzymes involved in PS synthesis and degradation is modulated by various factors, including cellular signaling pathways and nutrient availability.
- **Membrane transport:** The movement of PS between compartments is controlled by transporter proteins, which are themselves regulated by various stimuli.
- **Transcriptional control:** The expression of genes encoding enzymes and transporters involved in PS metabolism is subject to transcriptional regulation, influencing the levels of these proteins and ultimately PS levels.
**In summary, PS metabolic process is a dynamic and highly regulated process crucial for maintaining cellular integrity, mediating signaling events, and promoting cell survival or death.**
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Protein | Definition | Taxonomy |
---|---|---|
Group 3 secretory phospholipase A2 | A group 3 secretory phospholipase A2 that is encoded in the genome of human. [PRO:DNx, UniProtKB:Q9NZ20] | Homo sapiens (human) |
Group 10 secretory phospholipase A2 | A group 10 secretory phospholipase A2 that is encoded in the genome of human. [PRO:DNx, UniProtKB:O15496] | Homo sapiens (human) |
Compound | Definition | Classes | Roles |
---|---|---|---|
3-octylthio-1,1,1-trifluoro-2-propanone | 3-octylthio-1,1,1-trifluoro-2-propanone: a pesticide synergist; inhibits juvenile hormone esterase | ||
varespladib | aromatic ether; benzenes; dicarboxylic acid monoamide; indoles; monocarboxylic acid; primary carboxamide | anti-inflammatory drug; antidote; EC 3.1.1.4 (phospholipase A2) inhibitor | |
amentoflavone | biflavonoid; hydroxyflavone; ring assembly | angiogenesis inhibitor; antiviral agent; cathepsin B inhibitor; P450 inhibitor; plant metabolite | |
ochnaflavone | ochnaflavone : A biflavonoid with an ether linkage between the B-rings of the apigenin and luteolin subunits. It has been isolated from several members of the Ochnaceae plant family. ochnaflavone: from Lonicera japonica; structure given in first source | aromatic ether; biflavonoid; hydroxyflavone | anti-inflammatory agent; antiatherogenic agent; antibacterial agent; EC 3.1.1.4 (phospholipase A2) inhibitor; leukotriene antagonist; plant metabolite |
ym 26734 | YM 26734: inhibits group II phospholipase A2; structure given in first source | ||
indoxam | indoxam: structure in first source |