Page last updated: 2024-10-24

peroxisome proliferator activated receptor binding

Definition

Target type: molecularfunction

Binding to a peroxisome proliferator activated receptor, alpha, beta or gamma. [GOC:jl, PMID:12769781]

Peroxisome proliferator-activated receptors (PPARs) are nuclear receptors that play crucial roles in regulating lipid metabolism, inflammation, and cell differentiation. They are activated by a variety of ligands, including fatty acids, eicosanoids, and synthetic compounds. PPARs function as transcription factors, binding to specific DNA sequences known as peroxisome proliferator response elements (PPREs) in the promoter regions of target genes.

Upon ligand binding, PPARs undergo a conformational change, leading to the recruitment of coactivator proteins. These coactivators facilitate the assembly of a transcription complex at the PPRE, ultimately promoting the transcription of downstream target genes.

PPARs are divided into three subtypes: PPARα, PPARβ/δ, and PPARγ. Each subtype exhibits distinct tissue expression patterns and ligand preferences, contributing to their specific roles in physiological processes.

**PPARα** is primarily expressed in the liver, heart, and skeletal muscle. It plays a key role in fatty acid catabolism, regulating the expression of genes involved in β-oxidation, lipoprotein metabolism, and glucose homeostasis. PPARα activators are used clinically as lipid-lowering agents to treat dyslipidemia and hypertriglyceridemia.

**PPARβ/δ** is ubiquitously expressed and contributes to various metabolic processes, including fatty acid oxidation, glucose utilization, and energy expenditure. It has been implicated in promoting insulin sensitivity and reducing inflammation. PPARβ/δ activators have shown potential as therapeutic agents for metabolic disorders and cancer.

**PPARγ** is predominantly expressed in adipose tissue and plays a critical role in adipogenesis, the differentiation of preadipocytes into mature adipocytes. It also regulates insulin sensitivity and glucose metabolism in peripheral tissues. PPARγ activators are used as antidiabetic drugs to improve insulin sensitivity and reduce hyperglycemia in type 2 diabetes.

The molecular function of peroxisome proliferator-activated receptor binding involves a complex interplay between ligand binding, conformational changes, coactivator recruitment, and transcriptional activation. This process ultimately regulates the expression of genes that control various metabolic, inflammatory, and developmental processes.'
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Proteins (2)

ProteinDefinitionTaxonomy
Nuclear receptor subfamily 0 group B member 2A nuclear receptor subfamily 0 group B member 2 that is encoded in the genome of human. [PRO:DNx, UniProtKB:Q15466]Homo sapiens (human)
E3 ubiquitin-protein ligase Mdm2An E3 ubiquitin-protein ligase Mdm2 that is encoded in the genome of human. [PRO:DNx, UniProtKB:Q00987]Homo sapiens (human)

Compounds (20)

CompoundDefinitionClassesRoles
catecholcatecholsallelochemical;
genotoxin;
plant metabolite
gossypolGossypol: A dimeric sesquiterpene found in cottonseed (GOSSYPIUM). The (-) isomer is active as a male contraceptive (CONTRACEPTIVE AGENTS, MALE) whereas toxic symptoms are associated with the (+) isomer.
quinone1,4-benzoquinone : The simplest member of the class of 1,4-benzoquinones, obtained by the formal oxidation of hydroquinone to the corresponding diketone. It is a metabolite of benzene.

benzoquinone : The simplest members of the class of benzoquinones, consisting of cyclohexadiene which is substituted by two oxo groups.

quinone : Compounds having a fully conjugated cyclic dione structure, such as that of benzoquinones, derived from aromatic compounds by conversion of an even number of -CH= groups into -C(=O)- groups with any necessary rearrangement of double bonds (polycyclic and heterocyclic analogues are included).
1,4-benzoquinonescofactor;
human xenobiotic metabolite;
mouse metabolite
vorinostatvorinostat : A dicarboxylic acid diamide comprising suberic (octanedioic) acid coupled to aniline and hydroxylamine. A histone deacetylase inhibitor, it is marketed under the name Zolinza for the treatment of cutaneous T cell lymphoma (CTCL).

Vorinostat: A hydroxamic acid and anilide derivative that acts as a HISTONE DEACETYLASE inhibitor. It is used in the treatment of CUTANEOUS T-CELL LYMPHOMA and SEZARY SYNDROME.
dicarboxylic acid diamide;
hydroxamic acid
antineoplastic agent;
apoptosis inducer;
EC 3.5.1.98 (histone deacetylase) inhibitor
apomorphineApomorphine: A derivative of morphine that is a dopamine D2 agonist. It is a powerful emetic and has been used for that effect in acute poisoning. It has also been used in the diagnosis and treatment of parkinsonism, but its adverse effects limit its use.aporphine alkaloidalpha-adrenergic drug;
antidyskinesia agent;
antiparkinson drug;
dopamine agonist;
emetic;
serotonergic drug
cytarabinebeta-D-arabinoside;
monosaccharide derivative;
pyrimidine nucleoside
antimetabolite;
antineoplastic agent;
antiviral agent;
immunosuppressive agent
nutlin 3stilbenoid
nutlin 2
4-(3-(1-adamantyl)-4-hydroxyphenyl)-3-chlorocinnamic acid
nutlin 1nutlin 1: an MDM2 antagonist; structure in first source
nutlin-3anutlin 3: an MDM2 antagonist; structure in first sourcestilbenoid
MI-63MI-63 : An azaspiro compound resulting from the formal fusion of position 3 of 6-chloro-oxindole with position 3 of (2R,3SS5S)-3-(3-chloro-2-fluorophenyl)-5-(2,2-dimethylpropyl)-N-[2-(morpholin-4-yl)ethyl]pyrrolidine-2-carboxamide. It is a potent inhibitor of the MDM2-p53 interaction.azaspiro compound;
monochlorobenzenes;
monofluorobenzenes;
morpholines;
oxindoles;
pyrrolidines;
secondary carboxamide
apoptosis inducer
nutlin-3bNutlin;
piperazinone
anticoronaviral agent
pb 12
spautin-1
nvp-cgm097NVP-CGM097: an MDM2 and HDM2 inhibitor; structure in first source
rg7388RG7388: structure in first source
sar405838SAR405838: an inhibitor of the interaction of MDM2 and p53; has antineoplastic activity; structure in first source
rg7112
amg 232