Page last updated: 2024-10-24

cytoplasmic side of rough endoplasmic reticulum membrane

Definition

Target type: cellularcomponent

The side (leaflet) of the rough endoplasmic reticulum membrane that faces the cytoplasm. [GOC:ab, GOC:dos]

The cytoplasmic side of the rough endoplasmic reticulum (RER) membrane is a complex and dynamic region that plays a critical role in protein synthesis, folding, and transport. It is characterized by a distinct protein composition and associated molecular machinery, including ribosomes, chaperones, and protein-modifying enzymes.

The cytoplasmic face of the RER membrane is directly exposed to the cytosol, the fluid compartment of the cell. This proximity allows for the exchange of molecules and signals between the RER and the rest of the cytoplasm. The membrane itself is a phospholipid bilayer, similar to other cellular membranes, but it contains unique proteins that facilitate its specialized functions.

One of the most prominent features of the cytoplasmic side of the RER is the presence of ribosomes. These organelles are responsible for translating messenger RNA (mRNA) into protein. During protein synthesis, ribosomes bind to the RER membrane through a signal recognition particle (SRP), which recognizes a specific sequence in the nascent polypeptide chain. This binding event allows the newly synthesized protein to translocate into the lumen of the RER, where it undergoes further processing.

The cytoplasmic side of the RER also harbors a variety of chaperone proteins. Chaperones assist in the proper folding and assembly of proteins, preventing misfolding and aggregation. They ensure that proteins achieve their correct three-dimensional structures, which are essential for their biological activity.

In addition to chaperones, the cytoplasmic side of the RER contains enzymes involved in protein modification. These enzymes can add sugars, lipids, or other modifications to proteins, which can affect their function, localization, or stability.

The dynamic nature of the cytoplasmic side of the RER is also evident in the presence of protein translocators, which form channels through the membrane. These channels allow proteins to move from the cytosol into the RER lumen, where they can undergo further processing.

The intricate interplay of ribosomes, chaperones, and protein-modifying enzymes on the cytoplasmic side of the RER is crucial for the efficient synthesis, folding, and transport of proteins. This region is essential for the maintenance of cellular function and plays a central role in cellular homeostasis.'
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Proteins (4)

ProteinDefinitionTaxonomy
40S ribosomal protein S28A small ribosomal subunit protein eS28 that is encoded in the genome of human. [PRO:DNx, UniProtKB:P62857]Homo sapiens (human)
40S ribosomal protein S26A small ribosomal subunit protein eS26 that is encoded in the genome of human. [PRO:DNx, UniProtKB:P62854]Homo sapiens (human)
40S ribosomal protein S29A eukaryotic-type small ribosomal subunit protein uS14 that is encoded in the genome of human. [PRO:DNx, UniProtKB:P62273]Homo sapiens (human)
60S ribosomal protein L27A large ribosomal subunit protein eL27 that is encoded in the genome of human. [PRO:DNx, UniProtKB:P61353]Homo sapiens (human)

Compounds (2)

CompoundDefinitionClassesRoles
gentamicin sulfate
PF-06446846PF-06446846 : A triazolopyridine that is 3H-[1,2,3]triazolo[4,5-b]pyridine substituted by a 4-{(3-chloropyridin-2-yl)[(3R)-piperidin-3-yl]carbamoyl}phenyl group at position 3. It is a potent inhibitor of PCSK9.

PF-06446846: inhibits translation of PCSK9 ;structure in first source
benzamides;
monochloropyridine;
piperidines;
tertiary carboxamide;
triazolopyridine
antilipemic drug;
EC 3.4.21.61 (kexin) inhibitor