Page last updated: 2024-10-24

positive regulation of t-circle formation

Definition

Target type: biologicalprocess

Any process that activates or increases the frequency, rate or extent of t-circle formation. [GO_REF:0000058, GOC:BHF, GOC:BHF_telomere, GOC:nc, GOC:TermGenie, PMID:22579284]

Positive regulation of T-circle formation is a complex biological process that involves the integration of multiple cellular pathways and factors. T-circles are extrachromosomal circular DNA molecules that are formed during the process of V(D)J recombination, a crucial step in the development of mature, functional B and T lymphocytes. These circles arise from the excision of non-coding DNA sequences flanking the variable, diversity, and joining (V(D)J) gene segments, which encode the antigen-binding receptors of lymphocytes.

The formation of T-circles is tightly regulated to ensure that the process of V(D)J recombination proceeds accurately and efficiently. Multiple factors are involved in this regulation, including:

**1. RAG Recombinase:** This enzyme complex, consisting of RAG1 and RAG2 proteins, is the key player in V(D)J recombination. RAG recombinase recognizes specific DNA sequences flanking the V(D)J gene segments and introduces double-strand breaks in these sequences, initiating the process of T-circle formation.

**2. DNA Repair Machinery:** Following DNA double-strand breaks, the DNA repair machinery is activated to process the broken ends and facilitate their rejoining. This involves the action of DNA ligases and other repair enzymes, which work to seal the DNA breaks and form the circular T-circle structure.

**3. Transcription Factors:** Various transcription factors, including Pax5 and E2A, are involved in the regulation of T-circle formation. These factors bind to specific DNA sequences in the vicinity of the V(D)J gene segments and regulate the expression of genes involved in the recombination process, including the RAG recombinase.

**4. Chromatin Remodeling:** The structure of chromatin, the complex of DNA and proteins that package DNA within the nucleus, plays a crucial role in regulating T-circle formation. Specific chromatin modifications, such as histone acetylation, can enhance the accessibility of the V(D)J gene segments to RAG recombinase, promoting recombination and T-circle formation.

**5. Signaling Pathways:** Several signaling pathways, including the Notch and Wnt pathways, are involved in regulating T-circle formation. These pathways influence the expression of genes involved in the recombination process, including the RAG recombinase, and can modulate the activity of other factors involved in T-circle formation.

In summary, positive regulation of T-circle formation is a multi-faceted process involving a complex interplay of enzymes, transcription factors, signaling pathways, and chromatin modifications. These factors work in concert to ensure accurate and efficient V(D)J recombination, leading to the generation of a diverse repertoire of antigen-specific lymphocytes crucial for adaptive immunity.'
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Proteins (1)

ProteinDefinitionTaxonomy
DNA excision repair protein ERCC-1A DNA excision repair protein ERCC-1 that is encoded in the genome of human. [PRO:DNx]Homo sapiens (human)

Compounds (2)

CompoundDefinitionClassesRoles
n-hydroxynaphthalimideN-hydroxynaphthalimide: structure in first source
3-hydroxy-quinazoline-2,4-dione3-hydroxy-quinazoline-2,4-dione: structure in first source