Target type: biologicalprocess
The chemical reactions and pathways resulting in the formation of xylulose 5-phosphate. [GOC:bf, GOC:TermGenie]
The xylulose 5-phosphate biosynthetic process refers to the metabolic pathway responsible for the generation of xylulose 5-phosphate (Xu5P), a key intermediate in the pentose phosphate pathway (PPP). This process plays a crucial role in various cellular functions, including:
1. **Nucleotide biosynthesis:** Xu5P serves as a precursor for the synthesis of nucleotide building blocks like deoxyribose and ribose, which are essential for DNA and RNA synthesis.
2. **NADPH production:** The PPP utilizes Xu5P to generate NADPH, a reducing agent crucial for various cellular processes like fatty acid synthesis, detoxification of reactive oxygen species, and antioxidant defense.
3. **Biosynthesis of essential amino acids:** Xu5P contributes to the synthesis of essential amino acids like tryptophan and tyrosine through its involvement in the shikimate pathway.
4. **Metabolic flexibility:** Xu5P serves as a link between glycolysis and the PPP, enabling the cell to adjust its metabolic processes based on its needs.
The biosynthetic process of Xu5P can occur through two primary pathways:
1. **Transketolase reaction:** This pathway utilizes transketolase enzyme, which catalyzes the transfer of a two-carbon unit from sedoheptulose 7-phosphate (S7P) to glyceraldehyde 3-phosphate (G3P), producing Xu5P and erythrose 4-phosphate (E4P).
2. **Non-oxidative branch of the PPP:** This pathway involves a series of reactions that utilize transaldolase and transketolase enzymes to interconvert various sugar phosphates, ultimately leading to the production of Xu5P.
The synthesis of Xu5P is tightly regulated, ensuring its appropriate levels for optimal cellular function. This regulation is achieved through various mechanisms, including enzyme activity regulation, substrate availability, and feedback inhibition.
In summary, the xylulose 5-phosphate biosynthetic process is a vital pathway for cellular metabolism, contributing to nucleotide synthesis, NADPH production, amino acid synthesis, and metabolic flexibility. It involves a complex series of enzymatic reactions and regulatory mechanisms, highlighting its crucial role in maintaining cellular homeostasis.'
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Protein | Definition | Taxonomy |
---|---|---|
Transketolase | A transketolase that is encoded in the genome of human. [PRO:DNx, UniProtKB:P29401] | Homo sapiens (human) |
Compound | Definition | Classes | Roles |
---|---|---|---|
thiamine | thiamine(1+) : A primary alcohol that is 1,3-thiazol-3-ium substituted by (4-amino-2-methylpyrimidin-5-yl)methyl, methyl and 2-hydroxyethyl groups at positions 3, 4 and 5, respectively. | primary alcohol; vitamin B1 | Escherichia coli metabolite; human metabolite; mouse metabolite; Saccharomyces cerevisiae metabolite |
thiamine thiazolone pyrophosphate | thiamine thiazolone pyrophosphate: structure |