Target type: biologicalprocess
Any process that increases the frequency, rate or extent of poly(A) tail shortening of a nuclear-transcribed mRNA. Poly(A) tail shortening is the decrease in length of the poly(A) tail of an mRNA from full length to an oligo(A) length. [GOC:dph, GOC:tb]
Positive regulation of nuclear-transcribed mRNA poly(A) tail shortening is a crucial biological process that controls the stability and translation of messenger RNA (mRNA) molecules within the nucleus. This process involves a complex interplay of regulatory factors that modulate the length of the poly(A) tail, a string of adenine nucleotides attached to the 3' end of mRNA.
The poly(A) tail plays a vital role in mRNA metabolism, influencing its stability, translation efficiency, and nuclear export. Shortening of the poly(A) tail is a key mechanism for reducing mRNA stability and promoting its degradation, thereby regulating gene expression.
**Mechanism of Positive Regulation:**
1. **Recruitment of Deadenylase Enzymes:** Positive regulation of poly(A) tail shortening involves the recruitment of specific deadenylase enzymes, such as the CCR4-NOT complex and PARN, to the mRNA. These enzymes catalyze the removal of adenine nucleotides from the poly(A) tail.
2. **Signal-Mediated Activation:** Various signals, such as cellular stress, developmental cues, and specific regulatory proteins, can trigger the activation of deadenylase enzymes. These signals often involve modifications of the mRNA itself, including the presence of specific sequence elements or the binding of regulatory proteins.
3. **Recruitment of Other Factors:** Deadenylation can be further facilitated by the recruitment of other factors, such as poly(A)-binding proteins (PABPs) and RNA-binding proteins (RBPs). These factors can influence the accessibility of the poly(A) tail to deadenylases and promote the process of tail shortening.
4. **Regulation of Deadenylase Activity:** The activity of deadenylase enzymes can be regulated by various factors, including phosphorylation, ubiquitination, and interactions with other proteins. This fine-tuning of deadenylase activity ensures precise control over the rate of poly(A) tail shortening.
**Biological Significance:**
Positive regulation of nuclear-transcribed mRNA poly(A) tail shortening plays a vital role in numerous biological processes, including:
* **Gene Expression Regulation:** By controlling mRNA stability, this process allows for the fine-tuning of gene expression levels in response to various cellular signals.
* **Cellular Stress Response:** During stress conditions, poly(A) tail shortening can be accelerated to reduce the translation of unnecessary or harmful proteins.
* **Developmental Regulation:** Tail shortening is essential for developmental processes, such as cell differentiation and tissue morphogenesis, by controlling the expression of specific genes.
* **Disease Pathogenesis:** Aberrant regulation of poly(A) tail shortening can contribute to various disease conditions, including cancer and neurodegenerative disorders.
In conclusion, positive regulation of nuclear-transcribed mRNA poly(A) tail shortening is a complex and tightly regulated process that is essential for controlling gene expression and maintaining cellular homeostasis. Understanding the mechanisms underlying this process is crucial for unraveling the complexities of gene regulation and developing novel therapeutic strategies for various diseases.'
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Protein | Definition | Taxonomy |
---|---|---|
Protein argonaute-2 | A protein argonaute-2 that is encoded in the genome of human. [PRO:DNx, UniProtKB:Q9UKV8] | Homo sapiens (human) |
Compound | Definition | Classes | Roles |
---|---|---|---|
sulfaguanidine | sulfaguanidine : A sulfonamide incorporating a guanidine moiety used to block the synthesis of folic acid; mostly used in veterinary medicine Sulfaguanidine: A sulfanilamide antimicrobial agent that is used to treat enteric infections. | sulfonamide antibiotic | antiinfective agent |
sulfanilamide | substituted aniline; sulfonamide; sulfonamide antibiotic | antibacterial agent; drug allergen; EC 4.2.1.1 (carbonic anhydrase) inhibitor | |
sulfisomidine | sulfisomidine : A sulfonamide consisting of pyrimidine having methyl substituents at the 2- and 6-positions and a 4-aminobenzenesulfonamido group at the 4-position. Sulfisomidine: A sulfanilamide antibacterial agent. | pyrimidines; sulfonamide; sulfonamide antibiotic | antiinfective agent |
uridine monophosphate | uridine 5'-monophosphate : A pyrimidine ribonucleoside 5'-monophosphate having uracil as the nucleobase. Uridine Monophosphate: 5'-Uridylic acid. A uracil nucleotide containing one phosphate group esterified to the sugar moiety in the 2', 3' or 5' position. | pyrimidine ribonucleoside 5'-monophosphate; uridine 5'-phosphate | Escherichia coli metabolite; human metabolite; mouse metabolite |