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purine nucleotide catabolic process

Definition

Target type: biologicalprocess

The chemical reactions and pathways resulting in the breakdown of a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar. [GOC:go_curators, ISBN:0198506732]

Purine nucleotide catabolism is a fundamental metabolic process that involves the breakdown of purine nucleotides, such as adenosine monophosphate (AMP), guanosine monophosphate (GMP), and inosine monophosphate (IMP), into simpler molecules. These nucleotides are essential building blocks for DNA, RNA, and various coenzymes. The process occurs in two main stages:

1. **Initial Degradation:**
- **Conversion to Xanthine:** AMP and GMP are initially converted to inosine monophosphate (IMP). IMP is then dephosphorylated to inosine, which is further converted to hypoxanthine by the enzyme purine nucleoside phosphorylase. Hypoxanthine is then oxidized to xanthine by xanthine oxidase.
- **Conversion to Uric Acid:** Xanthine is further oxidized to uric acid by xanthine oxidase.

2. **Excretion:**
- Uric acid, the final product of purine nucleotide catabolism, is a waste product that is excreted primarily in the urine.

**Detailed Breakdown of the Process:**

* **AMP Catabolism:** AMP is dephosphorylated to adenosine by 5'-nucleotidase. Adenosine is then deaminated to inosine by adenosine deaminase.
* **GMP Catabolism:** GMP is dephosphorylated to guanosine by 5'-nucleotidase. Guanosine is then deaminated to xanthosine by guanosine deaminase. Xanthosine is further dephosphorylated to xanthine by purine nucleoside phosphorylase.
* **IMP Catabolism:** IMP is dephosphorylated to inosine by 5'-nucleotidase. Inosine is then converted to hypoxanthine by purine nucleoside phosphorylase.

**Regulation of Purine Nucleotide Catabolism:**
* **Enzyme Activity:** The activity of key enzymes involved in purine nucleotide catabolism, such as xanthine oxidase, is regulated by various factors, including dietary purine intake, hormones, and cellular redox state.
* **Genetic Factors:** Genetic defects in enzymes involved in purine nucleotide catabolism can lead to inherited disorders, such as Lesch-Nyhan syndrome.

**Significance of Purine Nucleotide Catabolism:**
* **Waste Product Removal:** The breakdown of purine nucleotides is crucial for removing excess purines from the body, preventing the buildup of toxic products.
* **Metabolic Balance:** Purine nucleotide catabolism plays a role in maintaining purine nucleotide homeostasis, ensuring sufficient supply for cellular functions.
* **Disease Implications:** Dysregulation of purine nucleotide catabolism can contribute to various diseases, including gout, hyperuricemia, and kidney stones.

**Conclusion:**

Purine nucleotide catabolism is a vital metabolic pathway for maintaining cellular homeostasis and removing excess purines. The process involves a series of enzymatic reactions that lead to the production of uric acid, which is then excreted from the body. Understanding the intricate details of this pathway is essential for comprehending the pathophysiology of purine-related diseases and developing effective treatment strategies.'
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Proteins (2)

ProteinDefinitionTaxonomy
2'-deoxynucleoside 5'-phosphate N-hydrolase 1A 5-hydroxymethyl-dUMP N-hydrolase that is encoded in the genome of human. [PRO:DNx, UniProtKB:O43598]Homo sapiens (human)
2'-deoxynucleoside 5'-phosphate N-hydrolase 1A 5-hydroxymethyl-dUMP N-hydrolase that is encoded in the genome of human. [PRO:DNx, UniProtKB:O43598]Homo sapiens (human)

Compounds (1)

CompoundDefinitionClassesRoles
adenosine monophosphateAdenosine Monophosphate: Adenine nucleotide containing one phosphate group esterified to the sugar moiety in the 2'-, 3'-, or 5'-position.adenosine 5'-phosphate;
purine ribonucleoside 5'-monophosphate
adenosine A1 receptor agonist;
cofactor;
EC 3.1.3.1 (alkaline phosphatase) inhibitor;
EC 3.1.3.11 (fructose-bisphosphatase) inhibitor;
fundamental metabolite;
micronutrient;
nutraceutical