Target type: molecularfunction
Binding to chondroitin sulfate, a glycosaminoglycan made up of two alternating monosaccharides: D-glucuronic acid (GlcA) and N-acetyl-D-galactosamine (GalNAc). [GOC:kmv, ISBN:0198506732]
Chondroitin sulfate binding is a molecular function that describes the ability of proteins to interact with chondroitin sulfate, a glycosaminoglycan (GAG) component of the extracellular matrix (ECM). Chondroitin sulfate is a linear polysaccharide composed of repeating disaccharide units of N-acetylgalactosamine and glucuronic acid, modified by sulfation. It plays a crucial role in structural integrity, cell signaling, and development.
Proteins that bind chondroitin sulfate typically possess specific domains or motifs that recognize and interact with the sulfate groups and the sugar backbone of chondroitin sulfate. These interactions are often mediated by electrostatic interactions, hydrogen bonds, and hydrophobic interactions.
The molecular function of chondroitin sulfate binding is involved in a wide range of biological processes, including:
* **ECM organization and integrity:** Chondroitin sulfate binding proteins help to assemble and maintain the structural integrity of the ECM. They can interact with other ECM components, such as collagen and hyaluronan, to form complex structures that provide support and cushioning for tissues.
* **Cell adhesion and migration:** Chondroitin sulfate binding proteins can facilitate cell adhesion and migration by interacting with cell surface receptors. These interactions can influence cell behavior, such as proliferation, differentiation, and wound healing.
* **Signal transduction:** Chondroitin sulfate binding proteins can act as receptors or co-receptors for signaling molecules. They can bind to growth factors or other signaling molecules and initiate intracellular signaling cascades, leading to changes in gene expression or cellular function.
* **Development:** Chondroitin sulfate binding proteins play important roles in development, particularly in the formation and maintenance of cartilage, bone, and other tissues. They can influence cell fate and morphogenesis.
The specific biological roles of chondroitin sulfate binding proteins vary depending on the protein and its cellular context. However, their ability to interact with chondroitin sulfate is fundamental to their function and is essential for a wide range of biological processes.'
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Protein | Definition | Taxonomy |
---|---|---|
Receptor-type tyrosine-protein phosphatase S | A receptor-type tyrosine-protein phosphatase S that is encoded in the genome of human. [PRO:DNx, UniProtKB:Q13332] | Homo sapiens (human) |
Compound | Definition | Classes | Roles |
---|---|---|---|
baicalein | trihydroxyflavone | angiogenesis inhibitor; anti-inflammatory agent; antibacterial agent; anticoronaviral agent; antifungal agent; antineoplastic agent; antioxidant; apoptosis inducer; EC 1.13.11.31 (arachidonate 12-lipoxygenase) inhibitor; EC 1.13.11.33 (arachidonate 15-lipoxygenase) inhibitor; EC 3.4.21.26 (prolyl oligopeptidase) inhibitor; EC 3.4.22.69 (SARS coronavirus main proteinase) inhibitor; EC 4.1.1.17 (ornithine decarboxylase) inhibitor; ferroptosis inhibitor; geroprotector; hormone antagonist; plant metabolite; prostaglandin antagonist; radical scavenger | |
morin | morin : A pentahydroxyflavone that is 7-hydroxyflavonol bearing three additional hydroxy substituents at positions 2' 4' and 5. morin: a light yellowish pigment found in the wood of old fustic (Chlorophora tinctoria) | 7-hydroxyflavonol; pentahydroxyflavone | angiogenesis modulating agent; anti-inflammatory agent; antibacterial agent; antihypertensive agent; antineoplastic agent; antioxidant; EC 5.99.1.2 (DNA topoisomerase) inhibitor; hepatoprotective agent; metabolite; neuroprotective agent |
scutellarein | scutellarein : Flavone substituted with hydroxy groups at C-4', -5, -6 and -7. scutellarein: aglycone of scutellarin from Scutellaria baicalensis; carthamidin is 2S isomer of scutellarein; do not confuse with isoscutellarein and/or isocarthamidin which are respective regioisomers, or with the scutelarin protein | tetrahydroxyflavone | metabolite |
tricetin | tricetin : Flavone hydroxylated at positions 3', 4', 5, 5' and 7. | pentahydroxyflavone | antineoplastic agent; metabolite |