Page last updated: 2024-10-24

phosphatidylinositol-3-phosphate binding

Definition

Target type: molecularfunction

Binding to phosphatidylinositol-3-phosphate, a derivative of phosphatidylinositol in which the inositol ring is phosphorylated at the 3' position. [GOC:bf, PMID:10209156, PMID:11395417, PMID:11557775]

Phosphatidylinositol-3-phosphate (PI3P) binding is a molecular function that involves the specific recognition and interaction of proteins with the lipid molecule PI3P. PI3P is a phosphorylated form of phosphatidylinositol, a phospholipid found in cell membranes. The presence of a phosphate group at the 3' position of the inositol ring distinguishes PI3P from other phosphoinositides and gives it unique biological properties.

PI3P binding is often mediated by specific protein domains, such as PX domains, FYVE domains, and PH domains. These domains exhibit a high affinity for PI3P and are involved in targeting proteins to specific cellular locations, such as endosomes and the plasma membrane.

The molecular function of PI3P binding plays a crucial role in various cellular processes, including:

- **Membrane trafficking:** PI3P acts as a signaling molecule that recruits proteins involved in membrane trafficking, such as clathrin and dynamin, to specific sites. This facilitates the formation and movement of vesicles, which are small membrane-bound sacs that transport molecules within cells.

- **Endocytosis:** PI3P is essential for the internalization of molecules and particles via endocytosis, a process by which cells take up material from their surroundings. PI3P binding proteins help to regulate the formation of endocytic vesicles and the sorting of internalized cargo.

- **Autophagy:** PI3P is involved in autophagy, a cellular process that degrades damaged or unnecessary cellular components. PI3P binding proteins contribute to the formation of autophagosomes, double-membrane vesicles that engulf cellular material for degradation.

- **Signaling pathways:** PI3P plays a role in signaling pathways that regulate cell growth, survival, and differentiation. PI3P binding proteins can act as downstream effectors of these pathways, mediating the cellular response to specific stimuli.

In summary, PI3P binding is a fundamental molecular function that governs a wide range of cellular processes related to membrane trafficking, endocytosis, autophagy, and signaling. The specific recognition and interaction of proteins with PI3P provide a crucial mechanism for regulating these essential cellular activities.'
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Proteins (3)

ProteinDefinitionTaxonomy
Cytosolic phospholipase A2 A cytosolic phospholipase A2 that is encoded in the genome of cow. [OMA:A4IFJ5, PRO:DNx]Bos taurus (cattle)
Disabled homolog 2-interacting proteinA disabled homolog 2-interacting protein that is encoded in the genome of human. [PRO:DNx, UniProtKB:Q5VWQ8]Homo sapiens (human)
Cytosolic phospholipase A2A cytosolic phospholipase A2 that is encoded in the genome of human. [PRO:DNx, UniProtKB:P47712]Homo sapiens (human)

Compounds (8)

CompoundDefinitionClassesRoles
ici 204,219zafirlukast: a leukotriene D4 receptor antagonistcarbamate ester;
indoles;
N-sulfonylcarboxamide
anti-asthmatic agent;
leukotriene antagonist
2-hydroxyestradiol2-hydroxy-17beta-estradiol : A 2-hydroxy steroid that consists of 17beta-estradiol having an additional hydroxy group at position 2.

2-hydroxyestradiol: catechol estrogen; RN given refers to (17 beta)-isomer
17beta-hydroxy steroid;
2-hydroxy steroid
carcinogenic agent;
human metabolite;
metabolite;
mouse metabolite;
prodrug
arachidonyltrifluoromethaneAACOCF3 : A fatty acid derivative that is arachidonic acid in which the OH part of the carboxy group has been replaced by a trifluoromethyl group

arachidonyltrifluoromethane: structure given in first source; inhibits 85-kDa phospholipase A2
fatty acid derivative;
ketone;
olefinic compound;
organofluorine compound
EC 3.1.1.4 (phospholipase A2) inhibitor
amentoflavonebiflavonoid;
hydroxyflavone;
ring assembly
angiogenesis inhibitor;
antiviral agent;
cathepsin B inhibitor;
P450 inhibitor;
plant metabolite
ochnaflavoneochnaflavone : A biflavonoid with an ether linkage between the B-rings of the apigenin and luteolin subunits. It has been isolated from several members of the Ochnaceae plant family.

ochnaflavone: from Lonicera japonica; structure given in first source
aromatic ether;
biflavonoid;
hydroxyflavone
anti-inflammatory agent;
antiatherogenic agent;
antibacterial agent;
EC 3.1.1.4 (phospholipase A2) inhibitor;
leukotriene antagonist;
plant metabolite
efipladibefipladib: structure in first source
methyl arachidonylfluorophosphonatephosphonic ester
pyrrophenonepyrrophenone: structure in first source