Target type: biologicalprocess
Any process that stops, prevents or reduces the frequency, rate or extent of chromosome organization. [GOC:obol]
Negative regulation of chromosome organization is a complex biological process that involves a variety of molecular mechanisms to control the structure and function of chromosomes. Chromosomes are highly organized structures that carry genetic information in the form of DNA. Their proper organization is essential for various cellular processes, including DNA replication, transcription, and cell division.
Negative regulation of chromosome organization ensures that chromosomes are properly condensed and decondensed at the appropriate times, preventing inappropriate gene expression, DNA damage, and cellular dysfunction.
Here are some key aspects of negative regulation of chromosome organization:
1. **Chromatin Remodeling:** Chromatin, the complex of DNA and associated proteins, undergoes constant remodeling. Enzymes like histone deacetylases (HDACs) and ATP-dependent chromatin remodeling complexes can condense chromatin, inhibiting gene expression and promoting chromosome compaction.
2. **Histone Modification:** Histones, the proteins around which DNA is wrapped, are subject to a variety of modifications, such as methylation, phosphorylation, and acetylation. These modifications can alter the accessibility of DNA to transcription factors and other regulatory proteins, influencing chromosome organization.
3. **Non-Coding RNA:** Non-coding RNAs (ncRNAs), such as microRNAs (miRNAs) and long non-coding RNAs (lncRNAs), play important roles in regulating gene expression. Some ncRNAs target genes involved in chromosome organization, influencing their expression and contributing to negative regulation.
4. **Protein Interactions:** A network of proteins, including condensins, cohesins, and SMC proteins, interact with each other and with DNA to control chromosome structure. Negative regulation involves the fine-tuning of these interactions, ensuring proper condensation and decondensation.
5. **Signaling Pathways:** Cellular signaling pathways, such as the MAPK and Wnt pathways, can influence the activity of proteins involved in chromosome organization. These pathways respond to external cues and can trigger negative regulation in response to stress or developmental signals.
6. **DNA Damage Response:** In response to DNA damage, cells activate mechanisms that halt the cell cycle and promote DNA repair. These mechanisms often involve negative regulation of chromosome organization, ensuring that damaged DNA is not replicated or transcribed inappropriately.
In summary, negative regulation of chromosome organization is a multifaceted process involving a range of molecular mechanisms. These mechanisms work together to ensure that chromosomes are organized and regulated properly, preventing errors in gene expression and maintaining cellular integrity.'
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Protein | Definition | Taxonomy |
---|---|---|
Histone-lysine N-methyltransferase SETMAR | A histone-lysine N-methyltransferase SETMAR that is encoded in the genome of human. [PRO:DNx, UniProtKB:Q53H47] | Homo sapiens (human) |
Compound | Definition | Classes | Roles |
---|---|---|---|
gsk343 | GSK343 : A member of the class of indazoles that is 1-isopropyl-1H-indazole-4-carboxamide in which the nitrogen of the carboxamide group is substituted by a (6-methyl-2-oxo-4-propyl-1,2-dihydropyridin-3-yl)methyl group and in which the indazole ring is substituted at position 6 by a 2-(4-methylpiperazin-1-yl)pyridin-4-yl group. A highly potent and selective EZH2 inhibitor (IC50 = 4 nM). GSK343: an EZH2 methyltransferase inhibitor | aminopyridine; indazoles; N-alkylpiperazine; N-arylpiperazine; pyridone; secondary carboxamide | antineoplastic agent; apoptosis inducer; EC 2.1.1.43 (enhancer of zeste homolog 2) inhibitor |