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Cajal body organization

Definition

Target type: biologicalprocess

A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of Cajal bodies, nuclear bodies that appear ultrastructurally as a tangle of coiled, electron-dense threads roughly 0.5 micrometers in diameter and are enriched in ribonucleoproteins, and certain general RNA polymerase II transcription factors. [GOC:mah, PMID:11031238]

Cajal bodies are dynamic, nuclear substructures that play a crucial role in the biogenesis and assembly of small nuclear ribonucleoproteins (snRNPs), which are essential for pre-mRNA splicing. The organization of Cajal bodies involves a complex interplay of various factors, including:

- **snRNP biogenesis and assembly:** Cajal bodies serve as sites for the final steps of snRNP assembly, where newly transcribed snRNAs associate with specific proteins to form functional snRNPs. This process involves the recruitment of various factors, including snRNP-specific chaperones, RNA-binding proteins, and enzymes responsible for snRNA modification.

- **RNA polymerase II (RNAPII) transcription:** Cajal bodies are associated with active RNAPII transcription sites, indicating their involvement in the regulation of snRNA transcription. This association allows for the efficient delivery of newly synthesized snRNAs to Cajal bodies for processing.

- **Protein-protein interactions:** Cajal bodies are characterized by a high concentration of specific proteins, including coilin, which is a scaffold protein that contributes to Cajal body structure and function. These proteins interact with each other and with other factors to facilitate snRNP assembly and other processes.

- **Dynamic assembly and disassembly:** Cajal bodies are highly dynamic structures that can assemble and disassemble depending on cellular needs. Their size and number can vary in response to changes in transcription activity and snRNP demand.

- **Nuclear trafficking:** Cajal bodies are connected to the nucleoplasm through a network of fibers, which facilitate the transport of snRNPs and other factors into and out of the Cajal body. This dynamic exchange ensures the efficient assembly and distribution of snRNPs throughout the nucleus.

In summary, Cajal body organization is a complex process involving snRNP biogenesis and assembly, RNA transcription, protein-protein interactions, dynamic assembly and disassembly, and nuclear trafficking. This intricate organization ensures the proper functioning of snRNPs, which are essential for pre-mRNA splicing and gene expression.'
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Proteins (1)

ProteinDefinitionTaxonomy
Serine/threonine-protein kinase VRK1A serine/threonine-protein kinase VRK1 that is encoded in the genome of human. [PRO:DNx, UniProtKB:Q99986]Homo sapiens (human)

Compounds (2)

CompoundDefinitionClassesRoles
ro 31-8220Ro 31-8220: a protein kinase C inhibitorimidothiocarbamic ester;
indoles;
maleimides
EC 2.7.11.13 (protein kinase C) inhibitor
bi d1870