Page last updated: 2024-10-24

box C/D snoRNP assembly

Definition

Target type: biologicalprocess

The aggregation, arrangement and bonding together of proteins and a box C/D snoRNA to form a box C/D small nucleolar ribonucleoprotein (snoRNP) complex. [GOC:krc]

Box C/D snoRNPs are essential components of ribosome biogenesis, playing a crucial role in guiding the modification of ribosomal RNAs (rRNAs). Their assembly is a complex process involving multiple steps, beginning with the transcription of the snoRNA gene. This newly synthesized snoRNA is then recognized by a protein complex, containing the essential proteins NOP56, NOP58, and Snu13, forming the early assembly intermediate. The box C/D snoRNA itself carries two conserved sequence motifs known as box C and box D. These motifs are crucial for the recruitment of the core snoRNP protein complex, which includes the methyltransferase fibrillarin and the RNA-binding proteins NOP1 and NOP56. This complex is formed through interactions between box C/D and the proteins, specifically between box C and NOP56, and between box D and fibrillarin. Once the core complex is assembled, it recruits other proteins such as NOP58 and Snu13, leading to the formation of the mature box C/D snoRNP. This mature complex then localizes to the nucleolus, where it interacts with the pre-rRNA, directing the methylation of specific nucleotides on the rRNA. This methylation process is essential for the proper folding and function of the rRNA, contributing to the assembly of functional ribosomes.'
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Proteins (2)

ProteinDefinitionTaxonomy
RuvB-like 1A RuvB-like 1 that is encoded in the genome of human. [PRO:DNx, UniProtKB:Q9Y265]Homo sapiens (human)
RuvB-like 2A RuvB-like 2 that is encoded in the genome of human. [PRO:DNx, UniProtKB:Q9Y230]Homo sapiens (human)

Compounds (3)

CompoundDefinitionClassesRoles
sorafenib(trifluoromethyl)benzenes;
aromatic ether;
monochlorobenzenes;
phenylureas;
pyridinecarboxamide
angiogenesis inhibitor;
anticoronaviral agent;
antineoplastic agent;
EC 2.7.11.1 (non-specific serine/threonine protein kinase) inhibitor;
ferroptosis inducer;
tyrosine kinase inhibitor
rottlerinrottlerin : A chromenol that is 2,2-dimethyl-2H-chromene substituted by hydroxy groups at positions 5 and 7, a 3-acetyl-2,4,6-trihydroxy-5-methylbenzyl group at position 6 and a (1E)-3-oxo-1-phenylprop-1-en-3-yl group at position 8. A potassium channel opener, it is isolated from Mallotus philippensis.

rottlerin: an angiogenesis inhibitor; an inhibitor of protein kinase Cdelta (PKCdelta) and calmodulin kinase III; RN refers to (E)-isomer; do not confuse this chalcone with an anthraquinone that is also called rottlerin (RN 481-72-1);
aromatic ketone;
benzenetriol;
chromenol;
enone;
methyl ketone
anti-allergic agent;
antihypertensive agent;
antineoplastic agent;
apoptosis inducer;
K-ATP channel agonist;
metabolite
akt-i-1,2 compoundAkt-I-1,2 compound: an aminopeptidase P inhibitor; structure in first source